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39 protocols using mab354

1

Immunohistochemical Analysis of Murine Brain Tissue

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Brains were taken out immediately after perfusion and were postfixed for 1 h (P0), 1–2 h (P4–P14) or 1–4 h (P21). After the postfixation, the brains were washed in 0.1 m phosphate buffer for 20 min and were sunk in 30% sucrose/0.1 m phosphate buffer. Sections were cut as described above for in situ hybridization. The following primary antibodies were used: β-galactosidase (β-gal; 1:100, goat, catalog #55976, Cappel; 1:500, chicken, catalog #ab9361, Abcam); SOX6 (1:100, rabbit, catalog #ab30455, Abcam); SP8 (1:100, goat, catalog #sc-104661, Santa Cruz Biotechnology); CTIP2 (1:200, rat, catalog #ab18465, Abcam); TBR1 (1:200, rabbit, catalog #ab31940, Abcam; 1:200, chicken, catalog #AB2261, Millipore); PV (1:500, rabbit, catalog #PV27, SWANT); somatostatin (SST; 1:100, rat, catalog #MAB354, Millipore); LIM Homeobox 6 (LHX6; 1:50, mouse, catalog #sc-271433, Santa Cruz Biotechnology); vesicle-associated membrane protein 2 (VAMP2; 1:200, rabbit, catalog #104 202, Synaptic Systems); NetrinG1 (1:100, goat, catalog #AF1166, R&D Systems); and cleaved caspase 3 (1:100, rabbit, catalog #D175, Cell Signaling Technology). Secondary antibodies conjugated with Cy2, Cy3, or Cy5 were obtained from Jackson ImmunoResearch.
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2

Immunostaining and Quantification of Neuronal Subtypes

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Brains were collected from mice after transcardiac perfusion with sterile PBS and 4% paraformaldehyde (PFA). Brains were post-fixed in 4% PFA for 24 h and incubated in 30% sucrose for an additional 24 h. Fixed brains were frozen and sectioned at 50 µm using a Microm HM550 cryostat. Free-floating sections were washed, then blocked for 1 h at room temperature. Sections were washed, then incubated with primary antibodies (1:1000 dilution): mouse anti-somatostatin (Millipore; MAB354) or rat anti-parvalbumin (Millipore; MAB1572) overnight at 4 °C. Sections were then washed and incubated with conjugated secondary antibody (1:1000 dilution) overnight at 4 °C. Brain sections were mounted on microscope slides and cover-slipped using Fluoromount-G and cell counts were performed by a condition blinded experimenter.
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3

Immunofluorescent Labeling of Neuronal Markers

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Slices were permeabilized by 10 min washing in 0.3% Triton X-100 in 1 × PBS. Next, slices were incubated in a blocking solution, containing 3% bovine serum albumin and 0.3% Triton X-100 in 1 × PBS, for 2 h at room temperature, and then incubated overnight at 4℃ in primary antibodies diluted in the same blocking solution. The following primary antibodies were used at the indicated dilutions: goat anti-Nurr1 (AF2156, R&D Systems; 1:250), rabbit anti-Nr2f2 (ab211776, Abcam; 1:250), mouse anti-Tle4 (sc365406, Santa Cruz Biotechnology; 1:250), goat anti-PV (PVG213, Swant; 1:2000), rat anti-SST (MAB354, Millipore; 1:250), rabbit anti-c-Fos (2250S, Cell Signaling; 1:1,000). The next day, slices were washed three times in 1 × PBS for 10 min, then incubated with secondary antibodies diluted in blocking solution for 2 h at room temperature, before washing the slices again three times with 1 × PBS for 10 min. The following secondary antibodies (ThermoFisher Scientific, MA, USA) were used at 1:500 dilution: Donkey anti-Goat IgG Alexa Fluor 488 (A-11055), Donkey anti-Goat IgG Alexa Fluor 555 (A-21432), Donkey anti-Rabbit IgG Alexa Fluor 555 (A-31572), Donkey anti-Mouse IgG Alexa Fluor 647 (A-31571), Chicken anti-Rat IgG Alexa Fluor 647 (A-21472). Finally, slices were mounted onto slides with Prolong Gold (P36930; ThermoFisher Scientific) and cover slipped.
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4

Somatostatin Immunohistochemistry in Mice

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Mice were anesthetized with an intraperitoneal injection of avertin, 0.4  mg/kg , and intracardially perfused with paraformaldehyde (PFA, 4%). Brains were postfixed in PFA overnight and sliced into 75  μm sections. The slices were stained using a rat monoclonal Sst antibody MAB354 (Millipore) dilution 1:600, followed by a Cy3 conjugated donkey antirat antibody (1:400) and imaged using Zeiss LSM710 confocal microscope.
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5

Immunohistochemical Staining of Brain Tissue

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When necessary, depending on the tissue penetrance and antigen recognition ability of the antibody used, antigen retrieval was performed by microwaving slides in 10 mM sodium citrate buffer for 1 min at maximum power, followed by 10 min at minimum power. Slides were then washed in 1× PBS and incubated in blocking solution (5% normal donkey or normal goat serum, 0.2% Triton® X-100 in PBS) for 1 h at room temperature. This was followed by incubation in primary antibody overnight at room temperature. Slides were washed in 1× PBS and incubated with secondary antibody solution for 1 h at room temperature. Slides were mounted in Vectashield with DAPI (Vector Laboratories). Primary antibodies used were as follows: rabbit anti-oligodendrocyte transcription factor 2 (1:300, AB9610, Millipore, Burlington, MA), rabbit anti-phosphorylated histone 3 (1:500, 06-570, Millipore), rat anti-somatostatin (1:50, MAB354, Millipore), rabbit anti-parvalbumin (1:1000, PV25, Swant, Marly, Switzerland), rabbit anti-calretinin (1:1000, Swant, 769913), and rabbit anti-Tbr1 (1:1000, gift from the Hevner laboratory, University of Washington School of Medicine, Seattle, WA). The following secondary antibodies were used: (1:250 dilution, Thermo Fisher Scientific): donkey anti-rabbit 555 (A31572), goat anti-rabbit 546 (A11035), goat anti-rabbit 488 (A11008) and goat anti-rat 488 (A11006).
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6

Immunohistochemical Labeling of Brain

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Immunohistochemical labeling of embryonic/postnatal brain sections or isolated cortical cells was performed as described earlier (Higginbotham et al., 2013 (link); Yokota et al., 2009 (link)). The following primary antibodies were used: acetylated tubulin (mouse, T6793, Sigma-Aldrich), α-tubulin (mouse, T6199, Sigma-Aldrich), BLBP (rabbit, ab32423, Abcam), BrdU (mouse, 347580, Becton Dickinson), Ctip2 (rat, ab18465, Abcam), Cux1 (rabbit, sc-13024, Santa Cruz Biotechnology), GABA (rabbit, A2052, Sigma-Aldrich), GFAP (rabbit, Z0334, DAKO), GFP (chicken, ab13970, Abcam), laminin (rabbit, L9393, Sigma), MEMO1 (rabbit, ab124901, Abcam), NeuN (mouse, MAB377, Chemicon), phospho-Vimentin (mouse, ab22651, Abcam), Pou3f2 (mouse, sc-393324, Santa Cruz Biotechnology), PTPRZ1 (rabbit, HPA015103, Sigma-Aldrich), PV (mouse, MAB1572, Millipore), RC2 (mouse IgM, Developmental Studies Hybridoma Bank, University of Iowa), RFP (rabbit, 600-401-379, Rockland), SST (rat, MAB354, Millipore), Tbr1 (rabbit, ab31940, Abcam), Tbr2 (rat, 14-4875, eBioscience), Tuj1 (mouse, 1409, STEMCELL technologies) and tyrosinated tubulin (rat, ab6160, Abcam). Appropriate Cy2, Cy3 or Alexa dye-conjugated secondary antibodies (Jackson ImmunoResearch, Molecular Probes) were used to detect primary antibody binding. DAPI (Sigma-Aldrich, D9542) was used as a nuclear counterstain.
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7

Immunocytochemistry of SGLT2 and Somatostatin

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For immunocytochemistry, single cells were fixed in 2.5% paraformaldehyde and kept at 4 °C. On the day of the experiment, cells were permeabilised with 0.1% Triton X-100 in phosphate-buffered saline (PBS) for 5 min at room temperature. Permeabilisation was followed by blocking of nonspecific binding with PBS containing 5% swine serum for 20 min. The cells were then incubated overnight with anti-SGLT2 antibodies (1:75, Santa Cruz Sc-393350) at 4 °C. On day 2, cells were incubated with mouse Alexa-488 Tyramide kit (T20948, Molecular Probes) according to manufacturer’s instruction. Cells were then incubated in primary antibodies anti-somatostatin (1:100, Millipore, MAB354) for 1 h at room temperature, followed by secondary antibodies Alexa 568 anti-rat (1:500, A-11077, Invitrogen) for 30 min by the nuclear stain RedDot2 (1:200, 40061, Biotium) for 10 min at room temperature. Samples were visualised with a Bio-Rad confocal microscope using appropriate lasers and filters.
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8

Immunohistochemical Analysis of Interneurons in Mouse Brain

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Following terminal general anesthesia, mice were transcardially perfused with 4% PFA in PBS and postfixed for 1–2 hr depending on age. Brains were washed in PBS, cryoprotected by exposure to 10% then 30% sucrose in PBS before being embedded in O.C.T. (VWR) on dry ice. Tissues were cryosectioned at 14–16 μm and mounted on slides. Prior to immunohistochemistry, slides were washed with PBS, then PBST (0.1M PBS, 0.1% Triton X-100) and blocked with 2% donkey serum in PBST for 1 hr at RT. Slides were incubated with primary antibody (Ab) in blocking solution overnight at 4°C. The following Abs were used: rabbit anti-Lhx6 (1:400; gift from V Pachnis) rabbit anti-SST (AB5494, Millipore), rat anti-SST (MAB354, Millipore), mouse anti-PV (MAB1572, Millipore), and chicken anti-GFP (ab13970, Abcam). Prior to incubation with the relevant secondary Ab (1:200; fluorophores: Cy2, Alexa488, Cy3, Alexa 546, Cy5, AMCA; Abcam/Millipore), slices were washed thoroughly in PBS for 2 hr at RT. Sections were washed and counterstained with DAPI before being mounted and sealed using nail polish. Images were acquired using a Zeiss laser scanning confocal microscope (LSM710).
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9

Multiplex Immunofluorescence Imaging

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Tissue sections were blocked with 5% BSA containing 0.1% triton X-100 and then incubated sequentially with primary antibodies and AlexaFluor conjugated secondary antibodies (Invitrogen, Carlsbad, CA). Primary antibodies used included: rat monoclonal anti-somatostatin (1:100, Millipore MAB354), rabbit polyclonal anti-parvalbumin (1:1000, Abcam ab11427), rat monoclonal anti-neprilysin (1:100, R&D Systems mAB1126), mouse monoclonal anti-CD31/PECAM1 (Novus Biologicals NB100-64796), and mouse monoclonal anti-GFAP (1:100, Novus Biologicals NBP1-05197). Immunofluorescence was visualized with a Zeiss Axio Imager Z1 fluorescent microscope. For combined in situ hybridization and immunohistochemistry, immunodetection was conducted after in situ hybridization was completed.
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10

Histological Analysis of Dlx5 Expression

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Mice were fixed by transcardiac perfusion with 4% paraformaldehyde and brains were post-fixed by overnight immersion in 4% paraformaldehyde at 4°C. Samples were cryoprotected in 30% sucrose and frozen. Cryoprotected brains were embedded in OCT (Leica, France) and 60-μm-thick free-floating cryostat sections were prepared.
For lacZ expression analysis, adult brains were fixed by perfusion with 4% PFA with no postfixation. X-gal staining was performed as described [18 (link)]. Immunohistochemistry on tissue sections was performed on free-floating sections (60 μm) of adult Dlx5lacZ/+ brains, incubated overnight at 4°C with a chicken anti β-D-galactosidase antibody (1:2000; Aves labs BGL-1040) combined with either mouse anti PV (1:2000, Sigma P3088), rabbit anti Calretinin (1:1000, Millipore AB5054) or rat anti Somatostatin (1:1000, Millipore MAB354). Sections were then incubated for 2 hours at room temperature in the corresponding secondary fluorescent antibodies (1:300; Jackson Immunoresearch). Pictures were acquired using a Leica SP5 confocal microscope.
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