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14 protocols using pepsin p7000

1

Carotenoid Extraction and Quantification

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HPLC grade methanol, ethanol, hexane, acetonitrile and methyl tert-butyl ether, and sodium hydroxide and hydrochloric acid were purchased from Fisher Scientific (Mississauga, ON, Canada), and Suprapur formic acid from VWR (Mississauga, ON, Canada). High-purity lutein 00012453 and zeaxanthin 00026504 standards were purchased from ChromaDex (Irvine, CA, USA). Ferulic acid was purchased from Sigma (Sigma-Aldrich Canada Ltd., Oakville, ON, Canada). Digestive enzymes, including α-amylase from human saliva A0521-2.5KU, pepsin P7000, and pancreatin 1760-25G, were purchased from Sigma Aldrich. Porcine bile extract SC214601 was purchased from Santa Cruz Biotechnology Inc. (Dallas, TX, USA). The enzyme inhibitors AEBSF [4-(2-aminoethyl)benzenesulfonyl fluoride hydrochloride] and PMSF (phenylmethylsulfonyl fluoride) were purchased from Millipore Sigma (Oakville, ON, Canada) and VWR Canada, respectively. The nano pure water was obtained from the Milli-Q integral water purification system (Millipore Ltd., Etobicoke, ON, Canada).
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2

Evaluating Probiotic Survival in Simulated GI Tract

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The survival of selected LAB through simulated gastrointestinal juices was examined according to a previous report with slight modification (Jamyuang et al., 2019 (link)). After two generations of cultivation, the LAB strain was inoculated with 1% (v/v) inoculum in MRS liquid medium and incubated for 18 h at 37°C. Cells were harvested by centrifugation (8000 rpm at 4°C for 5 min) and cell number was adjusted to 109 CFU/mL by adding PBS solution. The obtained bacterial suspensions (1 mL) were inoculated to 9 mL of filter sterilized simulated gastric juice solution [3 g/L pepsin (p7000, sigma), pH 2.0] at 37°C for 60 min. The gastric juice solution was removed by centrifugation (8000 rpm, 5 min) and subsequently re-suspended in 9 mL of filter sterilized simulated small intestinal juice solution [1 g/L trypsin (T105532, Aladdin), 0.3% bile salt, pH 8.0]. Samples were incubated statically at 37°C for 120 min. Then, the intestinal juice was removed by centrifugation (8000 rpm at 4°C for 5 min). The cell pellet was suspended in a sterile 0.85% NaCl (w/v) solution. Survival cells were counted on MRS plates. The survival rate (%) was calculated by the following equation:
where N0 and Nt represent viable bacterial cells before and after growth in the simulated gastrointestinal tract, respectively.
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3

Analytical Determination of Bioactive Compounds

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β-glucuronidase (G0751), ethyl acetate, hexane, isopropyl alcohol, methanol, Na2-ethylenediaminetetraacetic acid (E5134) and pepsin (P7000) were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). L-Ascorbic acid and NaOH were obtained from Avantor Performance Materials Poland S.A. (Gliwice, Poland). HCl and formic acid were purchased from Merck KGaA (Darmstadt, Germany). Naringenin (N5893) was obtained from Sigma-Aldrich Co. (St. Louis, MO, USA). Millipore Milli-Q system (Millipore Co., Millford, MA, USA) was used to produce ultrapure water.
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4

Quantitative Collagen Biochemical Assay

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Specimens from all four groups were removed following 22 days (n = 3 per group) and subjected to collagen biochemical assays (Biocolor life science assays, Carrickfergus, County Antrim, UK). Digested collagen samples were quantified similar to methods described previously [28 (link)]. Samples were digested with a solution of 0.5 M acetic acid (Sigma) and pepsin (1 mg/ml Pepsin (P7000), Sigma). Digestions were carried out for 16 hrs on a rocker (Orbitron Rotator; Boekel Scientific, Feasterville, PA) at 4°C. Collagen extracts were then assayed according to the in vitro tissue procedure provided by Sircol soluble collagen assay kit (Biocolor Ltd.). A multi-mode microplate reader was (Synergy HT, Biotek instrument, Inc, # 7091000) was set to an absorbance of 555 nm to obtain the collagen concentration.
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5

CGM and Enzymatic Modification Protocol

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CGM was provided by Longfeng Corn Development Co., Ltd. (Suihua, Heilongjiang, China), with a total protein content of 61.3%. GlcN was purchased from Sinopharm Chemical Reagent Co., Ltd. (Shanghai, China). TGase was purchased from Jiangsu Yiming Fine Chemical Industry Co., Ltd. (Qinxing, Jiangsu, China), with an activity of 1000 units (U) per gram (China). Alcalase (6.28 × 105 U/mL) was a kind gift from Novo Nordisk (Bagsvaerd, Denmark). Pepsin (P-7000) and trypsin (T-7409) were purchased from Sigma. All other chemicals used were of analytical grade.
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6

Phenolics and Antioxidant Bioaccessibility

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In vitro bioaccessibility of total phenolics and antioxidant activity were determined using an in vitro digestion model followed by dialysis, based on the method described by Ramírez-Moreno et al. (27 (link)). A sample of 20 mL was adjusted with 6 mol/L HCl to pH=2.0, then incubated and held under continuous shaking (Allegra 25TM; Beckman Coulter, Palo Alto, CA, USA) with 120 µL of pepsin solution (40 mg pepsin (P-7000; Sigma-Aldrich, Merck) per mL 0.1 mol/L HCl) at 37 °C for 2 h. Then, 1.5-mL solution of pancreatin, sodium cholate and sodium deoxycholate (5 mg pancreatin, 12.5 mg sodium cholate hydrate and 12.5 mg sodium deoxycholate per mL of 0.1 mol/L NaHCO3) was added. The solution was placed in a dialysis membrane (12–14 kDa molecular mass cut-off, width 35 mm; Sigma-Aldrich, Merck) and dialyzed in 250 mL of sodium bicarbonate solution at pH=7.5 for 16 h with gentle stirring (60 rpm). Aliquots of dialyzed fraction (bioaccessible fraction) were taken and phenolic compounds and antioxidant activity (ABTS•+, DPPH˙ and FRAP) were determined. The bioaccessibility (in the small intestine) of TPC and antioxidant activity were calculated as a difference between the values obtained for the original sample (before in vitro digestion) and the sample in the dialyzed fraction.
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7

Development of Buckwheat-Based Functional Food

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Buckwheat flour was obtained from Liangchen Century Grain Co., Ltd. (Wuxi, China). Psyllium fibre was provided by Xuzhou Nature Food Co., Ltd. (Xuzhou, China). Instant dry yeast was purchased from Angel Yeast Co., Ltd. (Yichang, China). Maize oil and salt were obtained from local stores in Wuxi, China. Pepsin (P7000) and pancreatin (P7545) used for starch digestion assays were obtained from Sigma–Aldrich Chemical Co., Ltd. (St. Louis, MO, USA). Amyloglucosidase was obtained from Megazyme Inc. (Bray, Ireland). The glucose quantification kit, which employs the glucose oxidase method, was obtained from Nanjing JianCheng Bioengineering Institute (Nanjing, China).
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8

Bioactive Compounds Extraction and Characterization

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Lecithin, 70% phosphatidylcholine from non-GMO soybean (Lipoid P75®) was kindly gifted from Lipoid GmbH (Ludwigshafen, Germany). Medium molecular weight chitosan with 80% degree of deacylation was donated by Primex (Siglufjordur, Iceland). Whey protein isolate (WP) with 89% protein content was purchased from Isopure Company, LLC (195 Engineers Road Hauppauge, New York, NY, USA). Maltodextrin with a dextrose equivalent of 16 (Glucidex®) was donated (Roquette, France). Triton X-100 was obtained from Merck (Darmstadt, Germany). Sodium acetate trihydrate, acetic acid, sodium hydroxide, hydrochloric acid, potassium chloride, neocuproine, gallic acid, catechin, Trolox, copper (II) chloride, porcine bile extract (B8631), pancreatic lipase (L3126), pancreatin (P3292), and pepsin (P7000) were all from Sigma-Aldrich (Steinheim, Germany). Folin–Ciocalteu’s phenol reagent, ammonium acetate, sodium hydroxide, sodium chloride, sodium nitrite, aluminum chloride, potassium dihydrogen phosphate, and sodium monohydrogen phosphate heptahydrate were purchased from Merck (Darmstadt, Germany). Cyanidin-3-glucoside chloride was obtained from Extrasynthese (Genay, France).
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9

Whey Protein Isolate Bioavailability Assessment

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Whey protein isolate (WPI) was kindly provided from Fonterra Cooperative Group Limited (Auckland City, New Zealand) and the enzyme Alcalase® (Bacillus licheniformis, activity 2.4 μg-1 protein) from Novozymes Latin America Ltda. (Araucária, PR, Brazil). Ferrous sulfate (FeSO4/12353) and enzymes (amylase/86250, pepsin/p7000, pancreatin/P1625, bile/B8631) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Caco-2 cells (passage 45) were purchased from Banco de Células do Rio de Janeiro (BCRJ, Rio de Janeiro, Brazil).
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10

Characterization of Gly-Pro-MCA Enzyme Assay

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Gly-Pro-4-methyl-coumaryl-7-amide (Gly-Pro-MCA) was purchased from Peptide Institute Inc. (Osaka, Japan). Sephacryl S-500 HR was purchased from GE Healthcare UK Ltd. (Buckinghamshire, UK). For electron microscopy sample preparation, 25% glutaraldehyde (G011/1) was purchased from TAAB Laboratories Equipment Ltd. (Berkshire, England) and collodion support film on 200 mesh copper grids (No. 6511) was purchased from the Nisshin EM Corporation (Tokyo, Japan). The digestive enzymes pepsin (P7000) and pancreatin (163-00142) were purchased from Sigma-Aldrich (St. Louis, MO, USA) and FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan), respectively. Recombinant human DPP IV (rhDPP IV) (1180-SE-010) was purchased from R&D Systems, Inc. (Minneapolis, MN, USA). The detergents, sodium cholate (C1254) and the protease inhibitor cocktail (S8820, SIGMAFAST Protease Inhibitor Tablets), were purchased from Sigma-Aldrich (St. Louis, MO, USA). All other reagents used were of the highest quality available.
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