The largest database of trusted experimental protocols

7 protocols using ab220365

1

Histological Analysis of Calf Muscle

Check if the same lab product or an alternative is used in the 5 most similar protocols
After 4 weeks of LL administration, the calf muscles were removed and fixed in 10% neutral buffered formalin. The fixed muscle tissue was embedded in paraffin, and the paraffin blocks were cut into 4 μm thick sections. To assess tissue morphology, transverse sections of muscle tissues were stained with hematoxylin (ab220365 Abcam, Cambridge, UK) and eosin (H&E). The sections were examined under a microscope (Eclipse TE 2000-U; Nikon, Düsseldorf, Germany). The PCSAs were analyzed using ImageJ software (version 2020).
+ Open protocol
+ Expand
2

Immunohistochemical Analysis of Ki-67 in Bladder Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Bladder tissues were embedded in paraffin wax and cut into 3 µm sections. After deparaffinization and rehydration, antigen retrieval was performed by immersing the sections in citrate buffer (pH 6.0) for 30 min in an autoclave sterilizer and then cooling at room temperature for 10 min. Sections were incubated in 3% H2O2 for 10 min, followed by blocking with 10% goat serum for 1 h. The blocking buffer was removed, and the sections were incubated with the primary antibody at a 1:50 dilution (Anti-ki67 antibody #ab15580, Abcam, Cambridge, England) overnight at 4 °C. Subsequently, the sections were incubated with a biotinylated goat anti-rabbit IgG secondary antibody at a 1:100 dilution, followed by incubation with diaminobenzidine solution (#ab64238, Abcam) for 1 min. The sections were counterstained with hematoxylin (#ab220365, Abcam) for 20 s, dehydrated in a series of increasing concentrations of alcohol, immersed in xylene twice for 10 min each, and coverslipped with mounting medium. The stained specimens were photographed with a TissueFAX Plus system. The Ki-67 index was determined by expressing the numbers of positively stained cells in the bladder transitional epithelium as positive cell number/mm2, followed by analysis using TissueFAX Plus software.
+ Open protocol
+ Expand
3

Quantifying Tumor-Infiltrating CD8+ T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Orthotopically implanted EMT6 tumors were excised after 7 days of dosing and embedded in Tissue-Tek® O.C.T. Compound (Sakura, Torrance, CA; 4583), snapped frozen in isopentane cooled over liquid nitrogen and stored at −80°C, and used for CD8 immunohistochemistry (IHC). 10-μM sections were treated with peroxidase and non-specific protein block (Dako, Santa Clara, CA; X0909) and then incubated with anti-CD8 primary antibody (Abcam, ab23378; 1:250). Goat anti-Rat IgG (H&L) secondary antibodies (Immunoreagents, Raleigh, NC; GtxRt-003-E2HRPX) were added to sections, and CD8 staining was developed using Dako EnVision®+ System-HRP (Dako, K400111–2). Sections were counterstained using Mayer’s hematoxylin (Abcam, ab220365). Whole slide digital scans were obtained on the Hamamatsu Nanozoomer (Shizuoka, Japan) at 20x magnification. Images were scored for CD8 staining at the periphery (< 150 μm from tumor margin), core (> 150 μm from tumor margin), and the entire section on a 0–4 scale, where 0 reflects no CD8 staining and 4 reflects highest CD8 staining. Double-blind scoring was repeated twice for each image, and the average score was determined.
+ Open protocol
+ Expand
4

Assessing PRMT1 and c-Fos Impact on Cell Invasion

Check if the same lab product or an alternative is used in the 5 most similar protocols
PRMT1-overexpressing MKN45 cells or c-Fos-transfected and PRMT1-knockdown MKN45 cells (5 × 104 cells/well) were plated in the top layer of a Transwell chamber with a membrane-permeable polycarbonate filter coated with BD Biosciences Matrigel (356237; San Diego, CA, USA) in Opti-MEM (11058021; Gibco Laboratories). The bottom compartment of the 24-well plate was filled with RPMI 1640 medium as a chemoattractant. Following 24 h of incubation, invaded cells from the upper compartment were fixed by 4% paraformaldehyde treatment and tinted with hematoxylin (ab220365; Abcam, Cambridge, US) and eosin Y solution (HT110116; Sigma‒Aldrich). The invaded cells in three random areas per well were counted and analyzed with a microscope connected to a camera and ImageJ.
+ Open protocol
+ Expand
5

Tissue Preparation and H&E Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
Murine-derived tumor tissue and main organs were embedded in optimal cutting temperature (OCT) compound (SAKURA-4583), flash frozen and kept at -80 °C until cutting. For H&E staining, slides were fixed in ice-cold acetone for 10 min, then immersed in filtered Harris modified Hematoxylin solution (Abcam-ab220365) for 5 min, then rinsed with tap water. The slides were dehydrated in ascending alcohol solutions (70%, 80%, 95%, and 100%) and cleared with xylene (Aladdin-1330–20-7) for 1 min each. Finally, the results of H&E staining were observed by a fluorescence microscope.
+ Open protocol
+ Expand
6

Immunohistochemical Analysis of Antioxidant Enzymes

Check if the same lab product or an alternative is used in the 5 most similar protocols
The slides were dewaxed, rehydrated, and rinsed twice in phosphate-buffered saline. Antigen retrieval with HistoReveal (Abcam, Cambridge, UK) was performed as a pretreatment. Slides were incubated with 3% hydrogen peroxide for 10 min and then with Protein Block (Abcam, Cambridge, UK) for 30 min. Sections were incubated with anti-NOS-3 mouse monoclonal antibodies (sc-376751, 1:50, Santa Cruz, Dallas, TX, USA), anti-MnSOD mouse monoclonal antibodies (ab16956, 1:300, Abcam, Cambridge, UK), and anti-MMP-9 mouse antibodies (DuoSet Human MMP-9/TIMP-1 Complex, DY1449, R&D Systems, Minneapolis, MN, USA) at 4 °C for 18 h. The color reaction was performed using biotinylated goat anti-polyvalent, streptavidin peroxidase, and DAB substrate (ab64264, Abcam, Cambridge, UK). Nucleic and other basophilic proteins were counterstained with hematoxylin (ab220365, Abcam, Cambridge, UK). The negative control consisted of samples incubated without the primary antibody. Slides were dehydrated, closed with a glass coverslip using DPX (Avantor Performance Materials Poland S.A, Gliwice, Poland), and examined using an Olympus BX51 microscope.
+ Open protocol
+ Expand
7

Immunohistochemical Analysis of S100P and β-hCG

Check if the same lab product or an alternative is used in the 5 most similar protocols
Paraffin slides were dewaxed with xylene for 20 min and 100%, 95%, and 75% ethanol in sequence for a total of 30 min and boiled in Antigen Retrieval Buffer (citrate buffer, pH 6.0, or Tris-EDTA buffer, pH 9.0) (ab93678 and ab93684, Abcam, USA) at 100°C for 15 minutes. The slides were blocked with 2% goat serum for 1 hour at room temperature and incubated with primary antibodies at 4°C overnight. The following primary antibodies were used: S100P (ab133554, 1:100, Abcam, USA) and β-hCG (ab9582, 1:50, Abcam, USA). After washing with TBST buffer, the slides were incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies for 1 hour at room temperature (GK500710, Gene Tech, China). HRP-conjugated antibodies were detected with diaminobenzidine (DAB) (GK500710, Gene Tech, China) for 10 min. The nuclei were then stained with hematoxylin solution (ab220365, Abcam, USA) for an addition 5 min. Images were captured with an Axio Scope A1 (Zeiss, Germany).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!