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7 protocols using mir 494 mimic

1

miR-494 Modulation in H9c2 Cells

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H9c2 cells were seeded into 6-well plates (3.5×105 cells/well) or 96-well plates (1.5×104 cells/well). At 80% confluence, cells were transfected with 50 nM miR-494 mimic (5′-UGAAACAUACACGGGAAACCUCU-3′), 50 nM miR-494 mimic negative control (NC; 5′-UUCUCCGAACGUGUCACGUTT-3′), 100 nM miR-494 inhibitor (5′-AGAGGUUUCCCGUGUAUGUUUCA-3′), 100 nM miR-494 inhibitor NC (5′-CAGUACUUUUGUGUAGUACAA-3′), 50 nM small interfering (si)RNA targeting SIRT1 (siSIRT1; 5′-CCCUGUAAAGCUUUCAGAATT-3′) or 50 nM siRNA negative control (5′-UUCUCCGAACGUGUCACGUTT-3′ for 4 h at 37°C; all purchased from Shanghai GenePharma Co., Ltd.) using Lipofectamine® 2000 (Invitrogen; Thermo Fisher Scientific, Inc.). At 28 h post-transfection, cells were collected, exposed to H/R treatment and used for subsequent experiments.
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2

miR-494 mimic and inhibitor transfection

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miR-494 mimic, miR-494 inhibitor and their controls (mimic control and inhibitor control) were synthesized by GenePharma Co. (Shanghai, China). These miRs were transfected into PC12 cells using Lipofectamine 3000 reagent (Invitrogen, Carlsbad, CA, USA) following the manufacturer’s instructions.
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3

MiR-494 Modulation in HEK293T Cells

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MiR-494 mimic, miR-494 inhibitor and the corresponding negative control (mimics NC and inhibitor NC) were purchased from Shanghai GenePharma Co., Ltd. (Shanghai, China). The miRNA mimics, miRNA inhibitor, and the negative control miRNA oligonucleotides were transfected into the HEK293T cells using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA), according to the manufacturer’s instructions.
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4

miRNA Oligonucleotides for Cellular Transfection

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MiRNA oligonucleotides, including miR‐494 mimic (5′‐UGAAACAUACACGGGAAACCUCU‐3′), miR‐494 inhibitor (5′‐AGAGGUUUCCCGUGUAUGUUUCA‐3′), and their respective scrambled negative control (NC): mimic NC (5′‐UUCUCCGAACGUGUCACGUTT‐3′) and inhibitor NC (5′‐CAGUACUUUUGUGUGUAGUACAA‐3′), were purchased from Shanghai GenePharma Co., Ltd. The final concentration of miRNA oligonucleotides for transfection was 100 nM, and the transfection reagent was Lipofectamine® 2000 (Invitrogen; Thermo Fisher Scientific, Inc.). Thirty hours after transfection, cells were collected for subsequent experiments. Each group had three samples and each sample was repeated three times (n = 3).
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5

Regulation of PTEN by miR-494 in AML12 cells

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Murine hepatic cell line AML12 cells (ATCC, Manassas, VA, U.S.A.) were cultured in DMEM/Ham’s F12 medium supplemented with 10% FBS, 100 u/ml penicillin, 100 μg/ml streptomycin, 5 μg/ml insulin, 5 μg/ml transferrin, 5 ng/ml selenium, and 40 ng/ml dexamethasone. AML12 cells at 70% confluence in six-well plates were transfected with 50 nM of miR-494 mimics, miR-494 inhibitor, mimics NC, or inhibitor NC (GenePharma Biotech) using Lipofectamine 3000 transfection agent. After 48 h, total RNA and protein were extracted, and PTEN mRNA and protein expression was analyzed by quantitative reverse-transcription PCR (qRT-PCR) and Western blot as described above.
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6

miR-494 Regulation in INS-1 Cells

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The INS-1 cell line, a well differentiated mouse insulinoma β-cell line was maintained in Dulbecco's modifed Eagle's medium containing high glucose (Sigma-Aldrich, St. Louis, MO, USA), supplemented with 10 % heat-inactivated fetal bovine serum (Gibco) and 70 µM β-mercaptoethanol, at 37 °C in a humidified atmosphere of 5 % CO2.
MiR-494 mimics, miR-494 inhibitor and controls were purchased from Shanghai GenePharma (Shanghai, China). INS-1 cells were transfected with 20 nM miR-494 mimic, miR-494 inhibitor or NC miRNAs with Lipofectamine™ RNAiMAX (Life Technologies, Grand Island, NY, USA). 48 hours after transfection, cells were collected for further experiments.
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7

Characterization of miR-494 target CDK6

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The wild-type 3′-untranslated region (3′-UTR) of CDK6 containing the miR-494 binding site was cloned into the pGL3-control vector (Ambion; Thermo Fisher Scientific, Inc.) to construct the CDK6-3′-UTR-wild-type (WT). The CDK6 3′-UTR mutations containing mutant (mut) sequences were obtained using a QuikChange Lightning Site-Directed Mutagenesis kit (Agilent Technologies, Inc., Palo Alto, CA, USA). All plasmids were confirmed by sequencing. The miR-494 mimics were generated by Shanghai GenePharma Co., Ltd. (Shanghai, China) and the scramble sequence was purchased from Ambion; Thermo Fisher Scientific, Inc. Briefly, the MG-63 (~2–3×106) and U2OS cells (~2–3×106) were seeded into a 24-well plate 1 day prior to transfection, and then co-transfected with miR-494 mimics (sense, 5′UGA AAC AUA CAC GGG AAA CCU C3′ and antisense, 5′GGU UUC CCG UGU AUG UUU CAU U3′; 100 nM) or scramble (sense, 5′UUC UCC GAA CGU GUC ACG UUU 3′ and antisense, 5′ACG UAC ACG UUC GGA GAA UU3′; 50 nM), in addition to the CDK6-3′-UTR-WT or CDK6-3′-UTR-mutusing Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific, Inc.). After 48 h, the luciferase activity was determined using a Dual-Luciferase reporter assay (Promega Corporation, Madison, WI, USA), which was normalized to the activity of Renilla luciferase.
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