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Histrap hp 5 ml

Manufactured by GE Healthcare
Sourced in United States

HisTrap HP 5 mL is a pre-packed column designed for purification of histidine-tagged proteins. The column is pre-packed with Ni Sepharose High Performance resin, which has a high binding capacity for histidine-tagged proteins. The column can be used with various chromatography systems to purify target proteins from complex samples.

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13 protocols using histrap hp 5 ml

1

Phage Display Antibody Screening

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We performed three individual biopanning of antibodies binding to synthetic peptides using a scFv library fused to PIII protein (Barbas et al. 2001 ). The scFv combinatorial library built from a healthy individual was amplified with the aid of the helper phage, and titrated.
After five successive washes, bound phages were eluted with glycine (0.2 M; pH 2.2). The eluded phages were amplified in Escherichia Coli XL1-Blue for plasmid extraction using a Miniprep Kit (Qiagen-27106), followed by electroporation in E. coli TOP-10 F’. Transformed bacteria were plated with SB medium, 2% (v/v) of 2 M glucose and 2.5mM IPTG (Sigma-I6758), to obtain soluble scFv. The most reactive scFv antibody was purified in a Nickel affinity column (Histrap HP 5mL; GE Healthcare). Then, a plate was sensitized with the supernatant containing soluble scFv, blocked with PBS-BSA 5% and detected with the anti-hemagglutinin (anti-HA) coupled with peroxidase (1:2500). The most reactive scFv was used for ELISA tests against specific targets.
After obtaining the most reactive scFv against each peptide, the antibodies were purified on a Nickel affinity column (Histrap HP 5mL, GE Healthcare) on HPLC (ÄKTApurifier-GE Healthcare) and concentrated by lyophilization.
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2

Protein Purification via IMAC and SEC

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After protein expression and lysis of the obtained E. coli cells, the cleared lysates could be directly loaded onto an Äkta chromatography system for protein purification (GE Healthcare). The lysis buffer was supplemented with 20 mM imidazole to reduce aspecific binding to the column (HisTrap HP 5 ml, GE Healthcare) for immobilized metal affinity chromatography (IMAC). The column was equilibrated with 20 mM NaH2PO4, 0.5 M NaCl and 20 mM imidazole at pH 7.5 before sample loading and then washed after sample loading for 5 column volumes with 8% elution buffer (100% elution buffer contained 20 mM NaH2PO4, 20 mM NaCl, 400 mM imidazole at pH 7.5). Sample elution was done using 100% of the elution buffer and the obtained fractions were subjected to SDS-PAGE followed by WB. Fractions containing the protein of interest were pooled and concentrated using Amicon® Ultra Centrifugal Filter Units with a 3 kDa molecular weight cutoff membrane (Millipore) before size exclusion chromatography on a Superdex200 HiLoad 16/600 (GE Healthcare), which was equilibrated with 25 mM Tris-HCl pH 7.5 and 150 mM NaCl. All purification steps were performed at 4°C, and all buffers were filter-sterilized (0.22 μm). The obtained fractions were analyzed using SDS-PAGE, relevant fractions were pooled (Supplementary Figure S5) and the protein concentration of the final solution was determined using the BCA assay.
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3

Synthesis of [13C]CDP-Gro using AQ1368

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[13C]CDP-Gro was synthesized as described previously43 (link) with slight modifications. Briefly, His-tagged AQ1368, a glycerol-phosphate cytidylyltransferase from Aquifex aeolicus, was expressed in E. coli BL21(DE3), purified using nickel-chelate chromatography (HisTrap HP 5 mL, GE Healthcare), and dialyzed with 50 mM Tris-HCl (pH 8.6) containing 150 mM NaCl and 5 mM MgCl2. [13C]CDP-Gro was produced by heating 20 μL of solution containing 50 mM Tris-HCl (pH 8.6), 5 mM MgCl2, 6.25 μg His-AQ1368, 2.5 mM CTP (Cytidine-13C9; Merck Sigma), and 2.5 mM glycerol-3-phosphate (Merck Sigma) at 37 °C for 5 min. The product was separated using reverse-phase HPLC with a COSMOSIL 5C18-AR-II column (4.6 × 250 mm; Nacalai Tesque) and isocratic elution with 20 mM TEAA buffer (pH 7). Product elution was monitored by measuring the absorbance at 260 nm. [13C]CDP-Gro was then collected, dried under vacuum, and dissolved in water. [13C]CDP-Gro production was confirmed by LC-MS analysis, as described above.
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4

Recombinant Plasmid pET-28a–AK Purification

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Recombinant plasmid pET-28a–AK from the Escherichia coli was preserved by our laboratory. The plasmid extraction kit, protein electrophoresis marker, nucleic acid electrophoresis marker, and DpnI digestive enzyme were purchased from the TaKaRa Company (Japan). His Trap HP 5 mL was bought from General Electric Company (USA), and His-Tag (27 × 108) Mouse mAb (HRP conjugate) (art. no. 9991S) from Cell Signaling Technology (USA). Monolith™ Protein Labeling Kit RED-NHS and Capillaries for Monolith NT115 Standard Capillary were bought from NanoTemper Technology Co., Ltd. (Beijing, China).
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5

Purification and Immobilization of Cre Recombinase

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A Cre recombinase fusion with a TAT internalization sequence fused on the N-terminus and a 6xHis tail on the C-terminus was was a gift from Steven Dowdy (Addgene plasmid # 35619). The bacterial DH5alpha stock was plated on an agar plate under Kanamycin selection. Colonies were picked and grown in LB for 24 hours at 37 °C and then a mini prep kit (StrataPrep) was used to extract the pTAT-CRE plasmid. The plasmid was then transformed in Escherichia coli BL21(DE3) (Novagen) and purified under native conditions using nickel-nitrilotriacetic acid affinity chromatography using HisTrap HP, 5 mL (GE) purification columns on the Äkta Start purification system (GE).
The Cre recombinase was loaded onto the HGN at 3 × 10−6 ᴍ concentration for 30 × 10−12 ᴍ HGN 800 × 10−6 ᴍ CuCl2 and incubated for 30 minutes on ice. The HGN were pelleted by centrifugation at 9000×g for 10 minutes at 4 °C twice and resuspended at a final concentrate of 320 × 10−12 ᴍ of HGN-Cre.
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6

Purification of C. elegans OSM-3 Motor Domain

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The plasmid containing the C. elegans OSM‐3 cDNA was a gift of R. Vale. To increase the probability of obtaining crystals, the genes of two fragments coding for the motor domain and either 10 (aa. 1–337) or 35 (aa. 1–362) additional C‐terminal residues were amplified by PCR. They were subcloned in a modified pET28 plasmid, introducing a sequence for an hexahistidine tag at the C terminus of the constructs, and an additional codon for an Ala residue just after the methionine initiation codon. Recombinant OSM‐3 constructs were overexpressed in Escherichia coli (BL21 CodonPlus) in LB medium after induction by 0.5 mm isopropyl β‐d‐1‐thiogalactopyranoside (IPTG) at 18 °C overnight. They were purified from the soluble fraction by Ni2+‐affinity chromatography (Histrap HP 5 ml; GE Healthcare, Vélizy, France) followed by gel filtration (Superdex 75 Increase 10/300 GL; GE Healthcare: Vélizy, France) in 25 mm Pipes‐K pH 6.8, 100 mm NaCl, 2 mm MgCl2, 1 mm EGTA, and 25 μm ATP. OSM‐3 proteins were concentrated to about 8 mg·mL−1, flash‐cooled in liquid nitrogen and stored at −80 °C until use.
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7

Recombinant NadA3 Protein Purification

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NadA3 protein was expressed as a His-tag fusion in E. coli BL21 (DE3) cells (New England Biolabs).
Cell pellets were resuspended in binding buffer (300 mM sodium chloride, 50 mM sodium phosphate, pH 8) and lysed by sonication (Qsonica Q700) with 5 cycles of 30 seconds of sonication (40% amplitude) interspersed with 1 minute on ice. Cell lysates were clarified by ultracentrifugation at 36200 x g for 45 minutes and then affinity chromatography was performed at room temperature using a HisTrap HP 5 mL linked to an AKTAPurifier (GE Healthcare), with the protein being eluted by employing an imidazole gradient. Size-exclusion chromatography was then performed using a HiLoad 16/600 superdex 75 pg column (GE Healthcare), equilibrated in binding buffer. The quality of the final NadA3 sample was checked by gel electrophoresis using NuPAGE Novex Bis-Tris 4-12 % gels ran in MES buffer then stained with SimplyBlue SafeStain (ThermoFisher). Fractions were then pooled and filtered using a Millex 0.22 μM filter. A BCA assay using a Pierce BCA Protein Assay Kit (ThermoFisher) was performed to determine the protein concentration. The infrared fluorescent Alexa Fluor 790 label was conjugated to NadA3 using an Alexa Fluor 790 Antibody Labelling Kit (Thermo Scientific) following manufacturer's instructions.
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8

Expression and Purification of CBD-PHY

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The expression plasmids and the protocols for expression and purification of CBD-PHY have been published in detail before. 23, 27 In brief, the WT and Y263F mutant were expressed in Escherichia coli strain BL21 (DE3). The biliverdin chromophore was incorporated in all protein lysates overnight on ice. The uniformly isotope-labeled protein was expressed in a minimal medium supplemented with 13 C-enriched glucose and 15 NH4Cl. The proteins were purified using affinity chromatography (HisTrap HP 5 ml, GE Healthcare), followed by size exclusion chromotography (Superdex 200, GE Healthcare) using A ¨kta pure protein purification system (GE Healthcare). The purified proteins were eluted in 30 mM Tris-HCl (pH 8), concentrated to 10 mg ml À1 , and flash frozen. All purifications were performed in the dark.
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9

Comprehensive Enzymatic Assay Protocol

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Pfu DNA polymerase was purchased from Biotechrabbit (Germany). Restriction enzymes and DNA ligase were purchased from Thermo Scientific (USA). DNA gel purification kits and plasmid purification kits were purchased from iNtRON Biotechnology (Korea). Farnesyl diphosphate (FPP), inorganic diphosphatase and standard alkane solution (C8–C20) were obtained from Sigma-Aldrich (St. Louis, MO, USA). Geranyl diphosphate (GPP) and geranylgeranyl diphosphate (GGPP) were purchased from Echelon Biosciences (Salt Lake City, UT, USA). Malachite Green Phosphate Assay kit was obtained from Bioassay Systems (Hayward, CA, USA). QuikChange site-directed mutagenesis kit was obtained from Agilent Technologies (Santa Clara, CA, USA). HisTrap™ HP 5 mL, and HiLoad 16/600 Superdex 200 pg were purchased from GE Healthcare (Chicago, IL, USA).
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10

Structural Characterization of Porphyromonas gingivalis Protein

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The protein expression cell line, BL21-Gold (DE3), catalog
#230132, was obtained from Agilent Technologies (Santa Clara, CA). The
pET-15b plasmid vector was obtained from Novagen/Millipore (Madison, WI).
Genomic DNA (Porphyromonas gingivalis strain W83, BAA-308D-5)
was obtained from ATCC (Manassas, VA). Oligonucleotide primers were obtained
from Integrated DNA Technologies (IDT, Coralville, IA). The IMAC-Ni column
(HisTrap HP, 5 ml) and gel filtration columns (HiLoad 26/600 and 16/600,
Superdex 200 PG) were obtained from GE Healthcare (Piscataway, NJ). Ampicillin,
isopropyl β-D-thiogalactopyranoside (IPTG), β-nicotinamide
adenine dinucleotide 2′-phosphate reduced tetrasodium salt (NADPH) were
obtained from Sigma-Aldrich Chemicals (St. Louis, MO). Crystallization screening
kits (SaltRx, Index, Crystal Screen, PEG/Ion) and supplies were obtained from
Hampton Research (Aliso Viejo, CA). Expression media LB and TB broth (BD
Difco™), MOPS buffer and NaCl (Acros Organics), and glycerol (Fisher
Chemical) were obtained from Fisher Scientific (Pittsburgh, PA).
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