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Bodipy c16

Manufactured by Thermo Fisher Scientific
Sourced in United States

BODIPY C16 is a fluorescent lipid probe that can be used to visualize lipid droplets and other lipid-rich structures within cells. It consists of a BODIPY fluorophore attached to a sixteen-carbon fatty acid chain. This product is commonly used in cell biology research to study lipid metabolism and trafficking.

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21 protocols using bodipy c16

1

Fluorescent Fatty Acid Synthesis

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Fluorescent FAs (BODIPY-C16 and BODIPY-C12) were purchased from Molecular Probes, Inc. (Eugene, OR). BODIPY C12-CoA and BODIPY C16-CoA were synthesized and purified by HPLC, as previously described, and found to be >99% unhydrolyzed (28 (link)). All other putative ligands were from Sigma-Aldrich (St. Louis, MO).
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2

Fluorescent Fatty Acid Synthesis and Purification

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Fluorescent fatty acid (BODIPY-C16) was purchased from Molecular Probes, Inc. (Eugene, OR). Docosahexaenoyl-CoA and BODIPY C16-CoA were synthesized and purified by HPLC as previously described [26 (link)] and found to be >99% unhydrolyzed. Rosiglitazone was generously provided by Dr. Khalid Elased (Wright State University). All other putative ligands were from Sigma-Aldrich (St. Louis, MO).
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3

Measuring Lipid Uptake in Atg16l1 Mice

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Atg16l1fl/fl and Atg16l1ΔCD4 mice were injected i.p. with 50 μg of fluorescent 16-carbon fatty acid analog BODIPY C-16 (Molecular Probes) reconstituted in DMSO. Mice were culled 1 hr later and tissue collected for analysis by flow cytometry.
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4

Multiparametric Lipid and Mitochondrial Staining

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After isolation, 1e6 cells from tissue single-cell suspensions were plated in a non-treated V-bottom 96 well plate. Cells were washed once with pre-warmed base RPMI and then suspended in 200ul of RPMI containing 0.5 mM BSA (Sigma, BSAV-RO), 5uM BODIPY C16 (ThermoFisher, D3821), 5 nM TMRM (ThermoFisher, M20036) and 20 nM MitoTracker DeepRed (ThermoFisher, M22426) for 20 min at 37 °C. Cells were washed 2x in cold PBS/2%FBS/2 mM BSA before lived/dead and surface staining and acquired immediately afterwards.
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5

Monitoring Intestinal Lymphatic Function

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To monitor lymphatic function in the small intestine, mice were fasted overnight followed by feeding them with 100 μl of 4,4-Difluoro-5,7-Dimethyl-4-Bora-3a,4a-Diaza-s-Indacene-3-Hexadecanoic Acid (BODIPY C16) (Thermo Fisher, D3821) diluted in sunflower oil (Sigma-Aldrich, S5007) at 1:250. Two hours later, mice were sacrificed and imaged by fluorescent stereo microscopy.
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6

Macrophage Lipid Metabolism Imaging

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Monolayers of macrophages infected at an MOI of 3:1 in 8-well glass bottom μ-Slides (Ibidi) were pulsed with 8 μM Bodipy-C16 (Thermo Fisher Scientific) complexed to fatty acid–free BSA as described (8 , 12 , 46 ). Following the pulse labeling period, the cells were chased in fresh media without label for 1 h. The infected macrophages were imaged by confocal microscopy as described (47 (link)).
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7

Alisol B Modulates Lipid Metabolism in Mouse Hepatocytes

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Mouse primary hepatocytes were exposed to 0.2 mM palmitate (PA) with or without Alisol B for 48 h. After being fixed in 4% paraformaldehyde for 30 min, cells were stained with Oil Red O (Cat#71029781, Sinopharm Chemical Reagent Co., Shanghai, China) working solution for 20 min and subsequently stained with hematoxylin solution for 3 min. The respective images of Oil Red O staining were captured with an Olympus IX73 microscope at 200× magnification. To evaluate hepatic fatty acid uptake, mouse primary hepatocytes were treated with or without Alisol B for 48 h and then incubated with 100 nM BODIPY-C16 (Cat#3821, Thermo Fisher Scientific, Waltham, MA, USA) for 5 min. After being fixed with 4% paraformaldehyde for 30 min, the hepatocytes were incubated with DAPI to stain nuclei for 3 min, and the images of BODIPY-C16 fluorescence were captured at 600× magnification with an Olympus FV1000-SIM microscope.
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8

Bodipy-C16 Lipid Uptake Assay

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SNB19 cells were seeded in four-well chamber slides and infected as described above. The cells were then incubated with 50 nM Bodipy-C16 (Thermo Fisher Scientific) in PBS for 15 min at room temperature. Subsequently, the samples were fixed with 4% paraformaldehyde in PBS, counterstained with DAPI, and imaged using a FSL confocal microscope (Olympus).
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9

Fatty Acid Uptake in BMDMs

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BMDMs were seeded at 1×105 cells/well into a 96-well plate and stimulated with vehicle or 10 μg/ml CpG for 18 hours. Following stimulation, media was replaced with fresh DMEM supplemented with 10% v/v FCS, 2 mM glutamax, 10 ng/ml gentamicin, and 1 μg/ml BODIPY-C16 (Thermo Scientific Fisher) for 1 hour. After labeling, cells were washed, detached, and analyzed by flow cytometry on a FACS Canto.
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10

Fatty Acid Uptake in BMDMs

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BMDMs were seeded at 1×105 cells/well into a 96-well plate and stimulated with vehicle or 10 μg/ml CpG for 18 hours. Following stimulation, media was replaced with fresh DMEM supplemented with 10% v/v FCS, 2 mM glutamax, 10 ng/ml gentamicin, and 1 μg/ml BODIPY-C16 (Thermo Scientific Fisher) for 1 hour. After labeling, cells were washed, detached, and analyzed by flow cytometry on a FACS Canto.
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