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7 protocols using isopentane

1

Muscle Histology and Immunohistochemistry

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Isolated plantaris or tibialis anterior muscles were frozen in liquid-nitrogen-cooled isopentane (Wako Pure Chemicals Industries, Osaka, Japan) for 1 min and then placed on dry ice for 1 hr to vaporize the isopentane. Transverse cryosections (10 μm) were stained with hematoxylin and eosin (H and E).
For immunohistochemical analyses, transverse cryosections (6 μm) were fixed with 4% paraformaldehyde (PFA) for 10 min. For embryonic myosin heavy chain (eMyHC) staining, sections were fixed with cooled acetone for 10 min at −20°C. Detailed information on antibodies used in this study is provided in Key Resource Table. For mouse anti-Pax7 and -eMyHC staining, a M.O.M. kit (Vector Laboratories, Burlingame, VT, USA) was used to block endogenous mouse IgG before reacting with the primary antibodies. The signals were recorded photographically using a BZ-X700 fluorescence microscope (Keyence, Osaka, Japan).
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2

Mouse Liver Histological Staining

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A liver of the mouse was embedded in Neg-50 (Thermo Fisher Scientific) and allowed to stand at 4 °C for 18 h. Frozen blocks were prepared using isopentane (FUJIFILM Wako Pure Chemical, Osaka, Japan) immersed in liquid nitrogen. The frozen block was sliced into 7 μm thick tissue sections using a cryostat HM550OVP (Thermo Scientific Microm) and a MAS-coated slide glass (MATSUNAMI, Kishiwada, Osaka, Japan) was pressed against the tissue section for its attachment on the glass. The frozen tissue section on the glass was washed with water and immersed in Meyer-hematoxylin solution (FUJIFILM Wako Pure Chemical) for 10 min for nuclear staining. Subsequently, it was washed with running water for 5 min and immersed in an eosin solution for 2 min to stain the cytoplasm. It was rinsed with water for about 5 s to wash off excess eosin solution, and soaked in 70 (v/v) % ethanol for 5 min, then in each of 90, 95, and 100 (v/v) % ethanol for 2 min in this order. After that, it was soaked in xylene for 5 min twice, and encapsulated with a specimen-encapsulating agent New MX (MATSUNAMI), a xylene-based anti-fading agent.
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3

Western Blot Analysis of AMPK Signaling

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Sepasol-RNA I Super G was purchased from Nacalai Tesque (Kyoto, Japan). Isopentane, formaldehyde, 2-mercaptoethanol, and 1% eosin Y solution were purchased from FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan). The PrimeScript RT Reagent Kit with gDNA Eraser was purchased from TaKaRa Bio (Shiga, Japan). SYBR FAST qPCR kits were purchased from Kapa Biosystems (Wilmington, MA, USA). Primary antibodies against AMPKα (#2532), phosphorylated Thr-172 AMPKα (#2535), Akt (#9272), phosphorylated Ser-473 Akt (#4058), forkhead box protein O1 (FOXO1) (#2880), phosphorylated Ser-256 FOXO1 (#9461), FOXO3a (#12829), and phosphorylated Ser-253 FOXO3a (#13129) were purchased from Cell Signaling Technology (Danvers, MA, USA); MEF2A (sc-313), PGC-1α (sc-517380), and Sp1 (sc-14027) were purchased from Santa Cruz Biotechnology (Dallas, TX, USA); and α-tubulin (#017-25031) was obtained from FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan). For secondary antibodies, goat anti-mouse IgG H&L (HRP) (ab6789) and goat anti-rabbit IgG H&L (HRP) (ab6721) were purchased from Abcam plc. (Cambridge, UK), and goat anti-rabbit IgG-HRP (sc-2004) was purchased from Santa Cruz Biotechnology. Polyvinylidene difluoride membrane (Immobilon-P, 0.45μm) for Western blotting was purchased from Merck (Darmstadt, Germany).
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4

Cryosectioning of Mouse Tibialis Anterior

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Mouse TA muscles were dissected and frozen in isopentane (Wako) that was cooled with liquid nitrogen. Using a cryostat (Leica), the frozen TA muscles were sectioned transversely at a thickness of 8 μm. Sections from the widest part of the TA muscles were attached to MAS-coated slide glasses (MATSUNAMI). The cryosections were kept at −80 °C until they were immunostained.
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5

Immunohistochemical Analysis of Tibialis Anterior Muscle

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Tibialis anterior muscles were isolated and frozen in liquid nitrogen-cooled isopentane (Wako Pure Chemical Industries, Osaka, Japan). For immunohistological analyses, transverse cryosections (6 μm) were fixed with 4% PFA for 10 min. After washing with 0.1% Triton-X100/PBS, endogenous mouse IgG was blocked using an M.O.M. kit (Vector Laboratories Inc., Burlingame, CA), and then reacted with mouse anti-Pax7 and rat anti-laminin α2. The next day, after washing with 0.1% Triton-X100/PBS, the sections were stained with secondary antibodies conjugated with Alexa 488 or Alexa 568 (Molecular Probes, Eugene, OR, USA). The signals were recorded photographically using the confocal laser scanning microscope system TCS-SP5 (Leica, Heerbrugg, Switzerland) or a fluorescence microscope BX51 (Olympus, Tokyo, Japan) equipped with a DP70 CCD camera (Olympus) or BZ-X700 (Keyence, Tokyo, Japan).
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6

Muscle Cryosectioning and Histology

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Isolated tibialis anterior muscles were frozen in liquid nitrogen-cooled isopentane.
(Wako Pure Chemicals Industries). Transverse cryosections (10 μm) were stained with H&E.
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7

Fluorescent Imaging of Skeletal Muscle Tissue

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Muscle tissue isolated from the left hind limb was stuck to a corkboard piece using Tragacanth gum (Wako). Then, the skeletal muscle was rapidly frozen in isopentane (Wako) pre-chilled in liquid nitrogen and stored at −80 °C until sectioning. Seven µm-thick cross-sections were made from muscle samples with a cryostat (Leica, Wetzlar, Germany) at −20 °C, fixed with 4% paraformaldehyde (Sigma-Aldrich) in PBS, and then stained with Alexa555-conjugated phalloidin (Thermo Fisher Scientific, Waltham, MA, USA) and Hoechst 33342 (Sigma-Aldrich). After staining, the cross-sections were washed with PBS and mounted using Entellan new (MERCK, Darmstadt, Germany). Stained muscle sections were observed on a fluorescence microscope (BZ-9000: KEYENCE, Osaka, Japan), and captured fluorescent images of the cross-sections were analyzed using the ImageJ software (Fiji package; NIH, Bethesda, MD, USA).
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