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12 protocols using mip 1β

1

Multiplex Analysis of Cytokine Profiles

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Plasma samples of the mice were analyzed using multiplex bead analysis. The manufacturer’s instructions were followed to measure interleukin (IL)-1β, IL-2, IL-5, IL-17, IL-6, IL-4, IL-10, granulocyte-macrophage colony stimulating factor (GM-CSF), granulocyte colony stimulating factor (G-CSF), interferon (IFN)-γ, tumor necrosis factor (TNF)-α, monocyte chemotactic protein (MCP)-1, regulated upon activation normal T cell expressed and secreted factor (RANTES), eotaxin, macrophage inflammatory protein (MIP)-1β, IL-23, and TNF-β (Millipore Corp., Billerica, MA, USA). The samples were analyzed using Luminex 200™ (Luminex, Austin, TX, USA). The levels of IL-1β, IL-2, IL-5, IL-17, IL-6, IL-4, IL-10, GM-CSF, G-CSF, IFN-γ, TNF-α, MCP-1, RANTES, eotaxin, and MIP-1β were detected using a multiplex map kit (MCYTOMAG-70 K, Millipore). IL-23 and TNF-β were detected using another multiplex map kit (MGAMMAG-300 K, Millipore).
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2

Cytokine Profiling in Murine Sepsis

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Whole blood was obtained by intracardiac puncture and evaluated for bacterial colonization as described(8 (link)). Murine blood plasma cytokine concentrations were measured using a magnetic-based multiplex assay for 32 analytes [G-CSF, GM-CSF, M-CSF, VEGF, TNF-α, IFN-γ, IL-1α, IL-1β, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-9, IL-10, IL-12(p40), IL-12(p70), IL-13, IL-15, IL-17A, KC(CXCL1), MIP2(CXCL2), LIX(CXCL5), MIG(CXCL9), IP10(CXCL10), LIF, MCP1(CCL2), MIP1α(CCL3), MIP1β(CCL4), RANTES(CCL5), and Eotaxin(CCL11)](Millipore) on a magnetic bead-based platform (Luminex). For all values that were less than or in excess of the endpoints of linearity for the assay, the limits of detection (minimum and maximum values) were substituted to avoid a Type I error based on extrapolation thus enabling the performance of statistical comparisons.
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3

Multiplex Cytokine Profiling in Serum

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Serum cytokine and chemokine levels were measured using suspension array technology in multiplex using a MILLIPLEX® map 29 premix kit for human eotaxin (eotaxin-1, CCL11), granulocyte colony stimulating factor (G-CSF), granulocyte–macrophage colony stimulating factor (GM-CSF), interferons (IFN)-α2, IFN-γ, Interleukin (IL)-10, IL-12 (p40), IL-12 (p70), IL-13, IL-15, IL-17, IL-1α, IL-1β, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-8, interferon gamma-induced protein (IP)-10, monocyte chemotactic protein (MCP)-1, macrophage inflammatory protein (MIP)-1α, MIP-1β, tumor necrosis factor (TNF)-α and TNF-β (Millipore Corp, St Charles, Missouri, USA) according to the manufacturer’s instructions.
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4

Immune Factors from Differentiated PBECs

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PBECs from four different subjects were differentiated at ALI. The conditioned basal medium in the bottom chamber was collected once the AEC differentiation was complete. PBEC differentiation media alone was used as control. Multiplex detection of 30 factors was done using the MILLIPLEX Human 30-Plex Cytokine Panel 1 (Cat# HCYTMAG-60K-PX30) which contains the following analytes- GM-CSF, G-CSF, IFNγ, IL-1α, IL-1rα, IL-1β, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-8, IL-10, IL-12p70, IL-12p40, IL13, IL15, IL-17, MCP-1, TNFα, TNFβ, Eotaxin, type I IFN, IP-10, MIP-1α, MIP-1β, EGF, VEGF and RANTES (Millipore, USA).
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5

Multiplex Cytokine Analysis of Mouse Plasma

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Mouse plasma samples were diluted 1:2 in assay buffer and analyzed via a multiplex bead analysis approach. Interleukin-1β (IL-1β), IL-2, IL-5, IL-17, IL-6, IL-4, IL-10, granulocyte-macrophage colony stimulating factor (GM-CSF), granulocyte colony stimulating factor (G-CSF), interferon-γ (IFNγ), tumor necrosis factor α (TNF-α), monocyte chemotactic protein-1 (MCP-1), regulated upon activation normal T cell expressed and secreted factor (RANTES), Eotaxin, Macrophage Inflammatory Protein-1β (MIP-1β), IL-23, and TNF-β were measured according to the manufacturer’s instructions (Millipore Corp., USA). All samples were analyzed on the Luminex 200TM (Luminex, Austin, TX, USA) platform.
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6

Multiplex Cytokine Profiling in Plasma

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Plasma cytokine and chemokine concentrations were assayed in duplicate using a macrophage inflammatory protein 1α (MIP-1α) singleplex kit and a 22-analyte multiplex panel [granulocyte colony-stimulating factor (G-CSF), granulocyte-macrophage colony-stimulating factor (GM-CSF), gamma interferon (IFN-γ), interleukin-1 (IL-1) receptor agonist (IL-1RA), IL-1β, IL-2, IL-4, IL-5, IL-6, IL-8, IL-10, IL-12/23(p40), IL-13, IL-15, IL-17, IL-18, monocyte chemoattractant protein 1 (MCP-1), MIP-1β, sCD40L, transforming growth factor α (TGF-α), tumor necrosis factor alpha (TNF-α), vascular endothelial growth factor (VEGF)] (both from Millipore [catalog number PRCYTOMAG-40K]). The assays were performed according to the manufacturer’s recommended protocol, and the results were read using a FlexMAP three-dimensional array reader (Luminex Corp.). The data were analyzed using Bio-Plex Manager software (Bio-Rad).
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7

Cytokine Profiling in Plasma Samples

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The level of plasma cytokines was detected by Luminex assay. Plasma was centrifuged from peripheral blood samples and stored in −80 °C. The following 12 cytokines were measured with a Luminex kit following the manufacturer’s instructions: IFN-γ, IL-2, MCP-1, MIP-1β, IL-1β, IL-6, TNF-α, IL-8, IL-10 (Merck Millipore, Billerica, MA, USA, PRCYTOMAG-40K-09C), IFN-α (Carlsbad, CA, USA, EPX01A-40216-901), IP-10 (Carlsbad, CA, USA, EPX01A-40284-901), and TGF-β (Merck Millipore, Billerica, MA, USA, TGFBMAG-64K-01). Firstly, cryopreserved plasma samples were thawed and mixed completely. A total of 25 μL of plasma samples and 25 μL of assay buffer were added into the corresponding well of 96-well plates and mixed with 25 μL of magnetic beads. The plates wrapped with tinfoil were incubated with agitation for 16–18 h at 4 °C. After incubation, the plates were washed and incubated with 25 μL of detection antibody for 1 h at room temperature (RT). Finally, 25 μL of streptavidin-PE was added to plates and incubated for 30 min at RT. The plates were washed and infiltrated with 150 μL sheath fluid. Plates were loaded on a Luminex® 200 (Bio-Rad, Hercules, CA, USA), and the results were analyzed for median fluorescent intensity using a five-parameter logistic method for calculating analyte concentration.
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8

Multiplex Analysis of Cytokine/Chemokine Profile

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Multiplex analysis based on the xMAP Luminex technology was performed with the use of MILLIPLEX MAP Human Cytokine/Chemokine Magnetic Bead Panel—Premixed 38 Plex-Immunology Multiplex Assay (sCD40L, EGF, Eotaxin/CCL11, FGF-2, Flt-3 ligand, Fractalkine, G-CSF, GM-CSF, GRO, IFN-α2, IFN-γ, IL-1α, IL-1β, IL-1ra, IL-2, IL-3, IL-4, IL-5, IL-6, IL-7, IL-8, IL-9, IL-10, IL-12 (p40), IL-12 (p70), IL-13, IL-15, IL-17A, IP-10, MCP-1, MCP-3, MDC/CCL22, MIP-1α, MIP-1β, TGF-α, TNF-α, TNF-β, VEGF) (Merckmillipore, Burlington, MA, USA), in accordance with the manufacturer’s instructions. Briefly, samples were incubated with fluorescent beads for 1 h, washed and incubated with phycoerythrin-streptavidin for 10 min (Merckmillipore, Burlington, MA, USA). The analysis was done using a Luminex 200 analyzer (Merckmillipore, Burlington, MA, USA). The CIMVs-MSCs and MSCs lysates in IP buffer (50 mMTris-Cl, 150 mMNaCl, 1% Nonidet-P40) were used for multiplex analysis. Equal protein load (25 μg) was used for the analysis.
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9

Cytokine Profiling in Serum Samples

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Blood samples were centrifuged for 10 min at 600 × g, and serum was immediately aliquoted and stored at −80°C. The following 11 cytokines were measured with a Luminex kit following the manufacturer’s instructions: IL-1β, IL-2, IL-6, IL-8, IL-10, IFN-γ, MCP-1, MIP-1β, TNF-α (Merck Millipore, Billerica, MA, United States, PRCYTOMAG-40K-09C), TGF-β (Merck Millipore, Billerica, MA, United States, TGFBMAG-64K-01), and IP-10 (Carlsbad, CA, United States, EPX01A-40284-901). After thawing the samples on ice and sufficient mixing, 25 μl of supernatant was loaded into each well of a 96-well plate and mixed with 25 μl of assay buffer and 25 μl of magnetic beads. The plates were incubated with agitation overnight at 4°C. After washing, 25 μl of detection antibody was added to each well, and the plate was incubated for 1 h at room temperature (RT). Then, 25 μl of streptavidin-PE was added to each well and incubated for 30 min at RT. Next, 150 μl sheath fluid was added to each well after washing. Plates were read on a Luminex® 200 (Bio-Rad, Hercules, CA, United States), and the data were analyzed for median fluorescent intensity using a five-parameter logistic method for calculating analyte concentration.
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10

Multiplex Cytokine Profiling in Serum

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Blood samples were centrifuged for 10 min at 600 ×g, and serum was immediately aliquoted and stored at 80°C. The following 11 cytokines were measured with a Luminex kit according to the manufacturer's instructions: IL-1β, IL-2, IL-6, IL-8, IL-10, IFN-γ, MCP-1, MIP-1β, TNF-α (Merck Millipore, Billerica, Massachusetts, USA, PRCYTOMAG-40K-09C), TGF-β (Merck Millipore, Billerica, Massachusetts, USA, PRCYTOMAG-40K-09C), and IP-10 (EPX01A-40284-901, Carlsbad, CA, USA). After thawing the samples on ice and su cient mixing, 25 μl of supernatant was loaded into each well of a 96-well plate and mixed with 25 μl of assay buffer and 25 μl of magnetic beads. The plates were incubated with agitation overnight at 4°C. After washing, 25 μl of detection antibody was added to each well and the plate was incubated 1 h at room temperature (RT). Then, 25 μl of streptavidin-PE was added to each well and incubated for 30 min at RT. Next, 150 μl sheath uid was added to each well after washing. Plates were read on a Luminex ® 200 (Bio-Rad, CA, USA) and the data analyzed for median uorescent intensity (MFI) using a ve-parameter logistic method for calculating analyte concentration.
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