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Immunofluorescence Staining Protocol for Cell Analysis

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For immunofluorescent staining, the cells were washed with PBS and fixed with 4% paraformaldehyde for 30 min at room temperature. After two washes with PBS, the cells were incubated with blocking buffer (10% goat serum and 0.3% Triton X-100 in PBS) for 1 h. Primary antibodies were diluted in blocking buffer and then added to the cells for 2 h at room temperature. The following primary antibodies were used: Bestrophin, MITF, PMEL17, AMPA R2 and Tuj1 (Abcam), ZO-1 (Thermo Fisher Scientific), Math5 (Millipore) and Brn3a (Santa Cruz). The cells were then subjected to three 3-min washes with PBS and incubated with secondary antibodies Alexa Fluor 488 or Alexa Fluor 594 of goat anti-rabbit or goat anti-mouse IgG (Thermo Fisher Scientific) diluted in blocking buffer containing DAPI (Thermo Fisher Scientific) for 1 h at room temperature. After three 3-min washes with PBS, the cells were visualized using confocal microscopy (Zeiss LSM 700).
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2

Immunofluorescence Characterization of hiPSC-RPE

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The methods for immunocytochemistry and immunohistochemistry of hiPSCs and hiPSC-RPE were described previously. 22 Antigens detected with primary antibodies (species, company, and dilution) were Pax6 (rabbit; Covance, Princeton, NJ, USA, 1/600), Mitf (mouse; Abcam, Cambridge, MA, USA, 1/ 1000), Bestrophin (mouse; Abcam, 1/500), RPE65 (rabbit; 1/ 1000), ZO-1 (rabbit; Zymed Thermo Fisher Scientific, Waltham, MA, USA, 1/100), rhodopsin (mouse; Sigma-Aldrich Corp., 1/ 1000), and human EMMPRIN (mouse; R&D, Minneapolis, MN, USA, 1/80). The bound primary antibodies were detected with secondary antibodies labeled with Alexa Fluor 488, goat antirabbit IgG (Invitrogen, 1/500), or goat anti-human IgG (Invitrogen, 1/500) or Alexa Fluor 546, goat anti-mouse IgG (Invitrogen, 1/1000), or goat anti-rabbit IgG (Invitrogen, 1/ 1000), and the nuclei were stained with 4 0 6-diamindino-2phenylindole (DAPI) (1 lg/mL; Molecular Probes, Thermo Fisher Scientific). The samples were imaged using a laser scanning confocal microscope (FV1000-D; Olympus, Tokyo, Japan).
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