The largest database of trusted experimental protocols

41 protocols using hematoxylin eosin

1

Spinal Cord Injury Regeneration Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Gross specimen observations, histological observations, and behavioral evaluations were performed at 1, 3, 6, and 12 weeks after transplantation. The evaluation criteria for neurological function were based on the Combined Behavioral Score Scale (Kerasidis et al., 1987). Evaluation categories included movement in open space, toe stretching, ground touching, reflex, posture change, ramp climbing, and swimming. The maximum score is 100 points for normal activity and 0 points for complete paralysis of the hind limbs.
Histological changes in the spinal cord after SCI were evaluated by hematoxylin-eosin staining (Beyotime, Shanghai, China). Stained sections can show the repair of tissue structure and the regeneration of blood vessels and neurons. The histology of the spinal cord was also examined by Pischingert’s methylene blue staining (Beyotime, Shanghai, China). Nissl bodies were dyed blue with methylene blue, which can reveal neuronal regeneration. The neuronal results were observed with an optical microscope (CX23; Olympus).
+ Open protocol
+ Expand
2

Histological Analysis of Tissue Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
The freshly removed tissue from the Control, NC, and IDO groups, as well as the tumor tissue from the HepG2 group, was fixed in 4% paraformaldehyde for 24 h, dehydrated, paraffin-embedded, sectioned, and stained with Hematoxylin and eosin according to the protocol described previously [22 (link)]. The acquired paraffin slices were deparaffinized, stained with hematoxylin-eosin (Cat #C0105 M, Beyotime), dried, and then mounted. Using an optical microscope, histological changes were found in the tissue sections (Nikon DS-U3).
+ Open protocol
+ Expand
3

Tissue Fixation and Hematoxylin-Eosin Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tissues were fixed in 4% formaldehyde and embedded in paraffin. Sections with a thickness of 4 µm were stained with hematoxylin-eosin (Beyotime Biotechnology, Nantong, Jiangsu, China) as described previously 31 (link), 32 (link).
+ Open protocol
+ Expand
4

Histological Tumor Grading Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumor tissue waxes were utilized to prepare tissue sections with a thickness of 4 μm. Following dewaxing and dehydration, the sections were stained using hematoxylin-eosin (Beyotime Biotechnology, Shanghai, China). Subsequently, the sections were rinsed and dried, and the resulting images were observed utilizing a microscope (Nikon, Japan). The tumor tissue is graded according to histological standards, including assessment of irregular tumor cell nuclei, nuclear abnormalities, and nuclear-to-cytoplasmic ratio. The scoring system for abnormal nuclei and nuclear-to-cytoplasmic ratio is as follows: 10 to 20%%=1 point, 20 to 30%%=2 points, and greater than 30%=3 points.
+ Open protocol
+ Expand
5

Aorta Atherosclerotic Lesion Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Atherosclerotic lesions were analyzed as described in our previous study17 (link). Briefly, the heart was fully exposed, and blood was collected by inferior vena cava puncture for serum lipids assay. After perfusion, the heart and the entire aorta from the junction with the heart to the iliac bifurcation were collected for careful removal of perivascular adipose tissue, and then immersed in freshly prepared 4% paraformaldehyde during 24 h. The aorta was then processed for oil red O (ORO; Sigma–Aldrich) staining, while the heart was embedded in Jung Tissue freezing Medium (Leica Microsystems) for obtaining serial frozen sections of 8 μm thickness. Hematoxylin–Eosin (Beyotime Biotechnology, Nantong, China) and ORO staining of the aortic root cross-sections were carried out. Lesion area analysis was performed (Supporting Information, Methods).
+ Open protocol
+ Expand
6

Dextran Sulfate Sodium-Induced Colitis Management

Check if the same lab product or an alternative is used in the 5 most similar protocols
The dextran sulfate sodium (DSS) was obtained from MP Biomedicals (Santa Ana, CA, USA). Mesalazine was produced by Sunflower Pharmaceutical group, Jiamusi Lu Ling Pharmaceutical Co., Ltd. (Liaoning, China). Friedelin was brought from NATURE STANDARD (Shanghai, China). Autophagy inhibition was brought from Selleck (Shanghai, China). Fecal occult blood test kit was obtained from Beijing Huashengyuan Medical Science and Technology Co., Ltd. (Beijing, China). The myeloperoxidase (MPO) determination kit was gained from JianCheng Bioengineering Institute (Nanjing, Jiangsu, China). Primary antibodies for ATG5, AMPK, and mTOR were purchased from CST (Cell Signaling Technology Corporation) and Abcam. The ELISA kits of proinflammatory cytokines, hematoxylin-eosin (HE), and periodic acid-Schiff (PAS) reagents were provided by Beyotime (Nantong, Jiangsu, China). Other unmentioned reagents were of analytical grade.
+ Open protocol
+ Expand
7

Histological Analysis of Kidney Fibrosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Kidney tissues were fixed in 4% paraformaldehyde (PFA) overnight, embedded in paraffin, and subsequently cut into 4 μm sections. The sections were mounted onto glass slides, deparaffinized with xylene, dehydrated through a graded ethanol series, and stained with hematoxylin–eosin (Beyotime Biotechnology; C0105M), Sirius red (Solarbio Life Science, S8060) and Masson’s trichrome (Solarbio Life Science, G1340) to evaluate collagen deposition. The fibrotic area was quantified with ImageJ software.
+ Open protocol
+ Expand
8

Lung Histopathology Scoring Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The fresh left lobes of the lungs were fixed in 4% formaldehyde for 48 h and embedded in paraffin. Each paraffin-embedded lung block was cut into 4 μm thin slices and stained with hematoxylin–eosin (Beyotime Biotechnology, Shanghai, China). The hematoxylin–eosin staining was used to assess peribronchial inflammation. The inflammatory changes were assessed by the following score: 0, normal; 1, few cells; 2, a ring of inflammatory cells with 1 cell layer deep; 3, a ring of inflammatory cells with two to 4 cells deep; 4, a ring of inflammatory cells with more than 4 cells deep (Xue et al., 2021 (link)).
+ Open protocol
+ Expand
9

Immunohistochemical Assessment of STAT1 in Xenografted Tumors

Check if the same lab product or an alternative is used in the 5 most similar protocols
Xenografted tumors were fixed in 4% formaldehyde, and embedded in paraffin. Sections with a thickness of 4 µm were stained with hematoxylin-eosin (Beyotime Biotechnology, Nantong, Jiangsu, China). STAT1 expression was assessed using IHC as described previously 24 (link). Briefly, the slides were pre-treated for antigen retrieval, followed by incubation with a 50:50 solution of 3% hydrogen peroxide and methanol for 20 min to block endogenous peroxidase and nonspecific background. The slides were incubated with anti-STAT1 antibody at a dilution of 1:400 for overnight at 4 °C. The following day, the slides were incubated with a biotinylated secondary antibody for 30 min, followed by incubation with avidin-biotin complex for 30 min. The slides were developed with 3,3-diaminobenzidine (DAB kit, Zsbio., Beijing, China). All the slides were lightly counterstained with hematoxylin for 30 s before dehydration and mounting.
+ Open protocol
+ Expand
10

Histological Analysis of Rat Liver and Ileum

Check if the same lab product or an alternative is used in the 5 most similar protocols
The liver and ileum tissues of rats were fixed with 10% formalin, embedded in paraffin, and then cut into 4 μm slices (EG1150C and RM2235, Leica, Germany). The slices were dewaxed with xylene, rehydrated by gradient ethanol, rinsed, stained using hematoxylin-eosin (C0105, Beyotime, Shanghai, China), dehydrated by gradient ethanol, transparent with xylene, and finally sealed in neutral balsam (G8590, Solarbio, Beijing, China). The pathological morphology of the liver and ileum tissue in each group was examined through a microscope (Olympus BX53; Olympus Corporation).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!