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16 protocols using cd83 pe

1

Multiparameter Immune Cell Profiling

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HLA-ABC FITC, HLA-DP,DQ,DR-FITC, CD40 PE, CD80 FITC, CD86 FITC, CD83 PE, CD1a PE, purified anti-human CCR7, CD14 PE, Langerin PE, TLR3 PE were purchased from BD Biosciences (San Jose, CA). CD40 PE, purified rat IgG2a, goat anti-rat IgG PE, mouse IgG1 FITC, mouse IgG1 PE were purchased from Biolegend (San Diego, CA). Recombinant human (rhu)-CCL21 was purchased from R&D Systems (Minneapolis, MN). Rhu-GM-CSF was manufactured by Berlex (Seattle, WA) while rhu-TGFβ1 and rhu-IL-4 were purchased from Biosource (Carlsbad, CA). Poly-ICR was provided by Nventa Biopharmaceuticals/Akela Pharma (Austin, TX). Poly-ICLC was provided by Oncovir, Inc. (Washington, DC) HPV16L1L2 virus-like particles (VLP) and chimeric HPV16L1L2-E7 VLP (HPV16 cVLP) were produced in insect cells and purified as previously described [28] (link). Endotoxin levels in VLP preparations were found to be below 0.06 EU using an E-toxate kit (Sigma-Aldrich).
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2

Flow Cytometry Analysis of CD34+ Cells

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Human nonexpanded and expanded PB-CD34+ cells (n = 5) were analyzed by flow cytometry (FACSCalibur flow cytometer, (Becton-Dickinson (BD), San Jose, CA). Dead cells were excluded by propidium iodide (PI) staining (Sigma, St Louis, MO). The CD34+ cells were incubated with a FcR blocking reagent (Miltenyi Biotec, Auburn, CA) and incubated with the monoclonal antibodies for 30 minutes at 4 °C. The stained cells were washed, resuspended, and then analyzed using Quad Statistics of CellQuest software (BD). The following monoclonal antihuman antibodies were used to characterized the CD34+ cell population: CD34-FITC (BD), CD31-PE (BD), CD133-PE (Miltenyi Biotec, Auburn, CA), CD68-PE (BD), CD83-PE (BD), VE-cadherin-PE (BD), VEGFR-2-PE (R&D Systems, Minneapolis, MN), Tie-2 (BD), CD117-PE (BD), CD45-PE (BD), IgG2a-FITC isotope controls (Miltenyi Biotec), and IgG1-PE isotope controls (Miltenyi Biotec).27 (link)The DNA content analysis was assessed by staining ethanol-fixed cells with PI and monitoring with the FACSCalibur flow cytometer. At least 20,000 cells were collected and analyzed with CellQuest software. Cell cycle distributions were calculated with ModFit LT cell-cycle analysis software (Verity Software House, Topsham, ME).
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Flow Cytometry Analysis of Dendritic Cells

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Surface markers was detected by FACSCanto II (BD Biosciences, USA) and analyzed by FlowJo software. Antibodies including anti-human CD40-FITC, CD80-PE, CD83-PE, and CD86-FITC (BD Biosciences, USA) were used for flow cytometry analysis.
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4

Characterization of Dendritic Cell Phenotype

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HLA-ABC FITC (MHC I), HLA-DP, DQ, DR-FITC (MHC II), CD80 FITC, CD86 FITC, CD83 PE, CD1a PE, CD14 PE, Langerin PE, E-cadherin PE, CD8-FITC, CD3-PE-Cy5, and CCR7 PE were purchased from BD Biosciences (San Jose, CA). CD40 PE, purified rat IgG2a, goat anti-rat IgG PE, mouse IgG1 FITC, and mouse IgG1 PE were purchased from Biolegend (San Diego, CA). Recombinant human (rhu)-CCL21 was purchased from R&D Systems (Minneapolis, MN); rhu-GM-CSF was purchased from Berlex (Seattle, WA); and rhu-transforming growth factor-β1 (TGFβ1) and rhu-IL-4 were purchased from Biosource (Carlsbad, CA).
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5

Molecular Profiling of Cell Subsets

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Thioacetamide (TAA), Oligomycin, DMSO, and CCCP were purchased from Sigma‐Aldrich. Vinculin #V9264, STAT1 #SAB4300326, and CYP2E1 HPA009128 were obtained from Sigma‐Aldrich, while p100/p52 #06‐413 from Millipore (Billerica, MA, USA) and p105/p50 #D4P4D from Cell Signaling (Danvers, MA, USA). PRC antibody was described previously.5 Anti‐mouse: CD45 (30‐F11), CD11c (HL3), Ly6c (AL‐21), Ly6g (1A8), MHCII I‐A/I‐E (M5/114.15.2), CD19 (ID3), CD8 (53‐6.7), CD4 (RM4‐5), TCRβ (H57.597), CD11b (M1/70) were purchased from BD Biosciences and F4/80 (BM8) from eBioscience. Anit‐human: CD14‐v500, CD1a‐FITC, HLA‐DR‐APC‐H7, CD86‐BV421, CD83‐PE were acquired from BD Biosciences and CD40‐APC from eBiosciences.
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6

Flow Cytometry Immunostaining Analysis

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Cell surface and intracellular immunostaining analyses were performed using an Accuri C6 Flow Cytometer. NK cells and T cells were stained with the dye-conjugated mouse mAbs to human CD56-PE-Cy5 (Beckman Coulter), CD3-PE (eBioscience), CCR7-FITC (R&D Systems), granzyme B-PE (Invitrogen), and CD16-FITC, CD8-PE-Cy5, CD45RA-FITC, CD45RO-PE, and CD57-FITC (BD Biosciences). MDSCs were stained for CD11b-FITC, CD14-PE, CD33-APC, CD34-PE-Cy5, CD11c-PE, HLA-DR-PE, DC-SIGN-FITC, CD80-FITC, CD86-FITC, and CD83-PE (BD Biosciences and eBioscience), as well as IDO-A488 (R&D Systems), NOS2-PE (Santa Cruz Biotechnology), and COX1-FITC/COX2-PE (BD Biosciences). The corresponding mouse antibody isotype controls IgG1-FITC, IgG2b-FITC, IgG1-PE, IgG2a-PE, IgG1-PE-Cy5, IgG1-APC, and IgG1-A488 (BD Biosciences) were used, as appropriate. Before staining, the cells were treated for 20 min at 4°C in PBS buffer containing 2% human serum, 0.5% BSA, 0.1% NaN3, and 1 μg/ml of mouse IgG (Sigma-Aldrich) to block non-specific binding. Cell permeabilization for intracellular staining was performed using the Foxp3 Fix/Perm Buffer Set (eBioscience), according to the manufacturer’s protocol. Cells were stained for 40 min at 4°C followed by washing with PBS buffer containing 0.5% BSA and 0.1% NaN3, then fixed and stored in 4% paraformaldehyde until analysis.
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7

Human Dendritic Cell Maturation

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The dendritic cell (DC) maturation experiments were contracted to and run by AllCells (Alameda, CA) using standard company protocols. Briefly, human PBMCs from 3 separate donors were cultured in RPMI medium supplemented with 10% FBS, 100 ng/ml human IL-4, and 140 ng/ml human granulocyte-macrophage colony-stimulating factor (GM-CSF) for 7 days, with medium supplementation on day 3. After the 7-day differentiation period, DCs were stimulated with BECC-derived TLR4Ls for 24 h at 37°C, 5% CO2. Cells were then lifted off the culture well using Accutase reagent, and EDTA added to halt enzymatic digestion. Cells were washed twice with PBS, nonspecific binding was inhibited using FcBlock (Miltenyi), and finally, cells were stained with CD80-fluorescein isothiocyanate (FITC), CD40-phycoerythrin (PE), and CD83-PE (BD Biosciences). Flow cytometry analysis was performed using an LSRII (BD Biosciences). Dead cells/debris were excluded using a forward scatter/side scatter (FSC/SSC) gate, 10,000 events were collected for each sample, and isotype controls for each antibody were run and determined to contain <1% of events recorded.
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8

Characterization of MUTZ-LC Maturation

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Migration of MUTZ‐LCs from the epidermis in RHS and maturation of MUTZ‐LCs were assessed by flow cytometry. Cell staining was performed using mouse antihuman CD1a‐PE (IgG1; BD Pharmingen), intracellular CD68‐PE (kit 556 079, IgG2b, κ; BD Pharmingen), langerin APC (IgG1; Miltenyi Biotec), CD86‐FITC, and CD83‐PE (IgG1; BD Biosciences). Isotype controls to assess nonspecific binding were mouse IgG1‐PE, IgG2b, κ (BD Pharmingen), and mouse IgG2a‐FITC (Miltenyi Biotec). Cells were washed and resuspended in FACS buffer (PBS supplemented with 0.1% bovine serum albumin and 0.1% sodium azide) and incubated for 30 minutes at 4°C in the presence of the antibodies. Subsequently the cells were resuspended in the same FACS buffer with an abundance of 123count eBeads (Thermo Fisher) before analysis using a FACSCalibur flow cytometer (Beckton Dickinson, San Jose, California). In addition, a propidium iodide (GIBCO) staining was performed to confirm the viability of MUTZ‐LC monocultures. All data were analyzed using CellQuest Pro FACS analysis software (BD Pharmingen).
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9

Comprehensive Dendritic Cell Immunophenotyping

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HLA-ABC FITC (MHC I), HLA-DP,DQ,DR FITC (MHC II), CD80 FITC, CD83 PE, CD86 FITC, and purified anti-human CCR7, were purchased from BD Biosciences (San Jose, CA). CD40 PE, purified rat IgG2a, goat anti-rat IgG PE, mouse IgG1 FITC, mouse IgG1 PE were purchased from Biolegend (San Diego, CA). Recombinant human (rhu)-CCL21 was purchased from R&D Systems (Minneapolis, MN), Rhu-GM-CSF from Berlex (Seattle, WA), and rhu-TGFβ1 and rhu-IL-4 from Biosource (Carlsbad, CA). Poly-ICR was provided by Nventa Biopharmaceuticals/Akela Pharma (Austin, TX). Poly-ICLC (Hiltonol®) is a clinical grade current good manufacturing practices (cGMP) form of s-Poly I:C that was provided by Oncovir, Inc. (Washington, D.C.) HPV16 L1L2 virus-like particles (VLP) and chimeric HPV16 L1L2-E7 VLP (HPV16 cVLP) were produced in insect cells and purified following published procedures [28 (link)], and endotoxin levels were below 0.06 EU as measured using an E-toxate kit (Sigma-Aldrich).
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10

Immunophenotyping of BDCA-1+ and BDCA-3+ Dendritic Cells

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For analysis of the phenotype of BDCA-1+/BDCA-3+ myDC, cells were stained with CD11c-Alexa Fluor 700 (BD Biosciences, clone B-ly6), CD1c-Brilliant Violet 510 (BD Biosciences, clone F10/21A3), CD141-PE/Cy7 (Invitrogen, clone JAA17), CD274-PE-CF594 (BD Biosciences clone MIH1), CD86-Brilliant Violet 421 (BD Biosciences, clone 2331 (FUN-1)), CD83-PE (BD Biosciences, clone HB15e), CD40-APC (BD Biosciences, clone 5C3), CD80-PE/Cy5 (BD Biosciences, clone L307.4), HLA-ABC-FITC (BD Biosciences, clone G46-2.6), Zombie Yellow (Biolegend) for 20 minutes at 4°C. After washing, cells were resuspended in PBS/0.5%BSA and acquired on a BD LSR Fortessa instrument. Data analysis was performed using FlowJo software. The gating strategy was as follows: cells were first gated on FSC/SSC characteristics, followed by gating on single cells. Next, dead cells were excluded and subsequently we gated on the CD11c+ population. On this gate, CD1c+ CD141- cells were identified as BDCA-1+ myDC and CD1c- CD141+ cells as BDCA-3+ myDC. Subsequently, we evaluated for each myDC subtype the expression of HLA-ABC, CD83, CD274/PD-L1, CD80, CD40 and CD86.
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