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Nucleospin genomic dna purification kit

Manufactured by Macherey-Nagel
Sourced in Germany

The NucleoSpin genomic DNA purification kit is a laboratory product that is designed to isolate and purify genomic DNA from various biological samples. The kit utilizes a silica-based membrane technology to efficiently capture and elute genomic DNA, providing high-quality genetic material for downstream applications.

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4 protocols using nucleospin genomic dna purification kit

1

Whole Exome DNA Sequencing Protocol

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Genomic DNA was isolated from 2 ml of peripheral whole blood or saliva using the NucleoSpin genomic DNA purification kit (Macherey-Nagel GmbH & Co., Düren, Germany). The purified DNA was measured for quality and quantity by spectrophotometry measured by the OD260/OD280 ratio. To further check the integrity of the isolated DNA, agarose gel electrophoresis was performed. Whole exome sequencing was performed with the Agilent SureSelect XT Human All Exon V5 Target Enrichment System, and paired-end sequencing reads were obtained with the Illumina HiSeq 2500 (Theragen Etex Bio Institute, Suwon-si, Korea).
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2

Generation of STAT3 Myeloid Knockout Mice

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Mice homozygous for the loxP-flanked (floxed) Stat3 gene (STAT3fl/fl) were kindly gifted from Dr S Akira. Mice carrying a Cre transgene under the control of the distal LysM promoter (LysM-Cre+/+) were purchased from the Jackson Laboratory (Bar Harbor, ME). Mice with a STAT3 deletion in myeloid cells were generated by crossing mice with the floxed STAT3 allele with mice expressing Cre under the control of the LysM promoter. Genomic DNA was isolated from tail tips using a NucleoSpin genomic DNA purification kit (Macherey-Nagel GmbH, Duren, North Rhine-Westphalia, Germany). The PCR reaction was performed using AccuPower PCR premix (Bioneer, Daejeon, Korea) with the primers, which are specific for exons 22 and 23 of STAT3 and Cre transgene, according to the manufacturer’s instructions. All experiments were performed with male mice aged 8–10 weeks. Experimental animals were maintained under specific pathogen-free conditions and 22±1 °C with a reversed 12 h light–dark cycle (lights on at 0700 h). All experimental procedures were reviewed and approved by the Institutional Animal Care and Use Committee at the College of Medicine, Seoul National University.
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3

Sanger Sequencing for LAMB3 and FAM20A

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DNA was isolated from the peripheral whole blood or saliva of the participating family members with the NucleoSpin genomic DNA purification kit (Macherey-Nagel GmbH & Co., Düren, Germany). The primers and conditions for the Sanger sequencing of the exons and exon-intron boundaries of LAMB3 and FAM20A were described previously [23 (link), 24 (link)]. PCR amplifications were done with the HiPi DNA polymerase premix (Elpis Biotech, Daejeon, Korea), and PCR amplification products were purified with a PCR Purification Kit and protocol (Elpis Biotech). DNA sequencing was performed at a DNA sequencing center (Macrogen, Seoul, Korea).
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4

Whole Exome Sequencing of Family Members

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A constitutional chromosome study was performed for the proband. Genomic DNA was isolated from 2 mL of peripheral whole blood from the participating family members with the NucleoSpin genomic DNA purification kit (Macherey-Nagel GmbH & Co., Düren, Germany), and the quality and quantity of the purified DNA were measured. Whole exome sequencing was performed after exome capturing with the Agilent SureSelect XT Human All Exon V5 Target Enrichment System, and 101-bp paired-end sequencing reads were obtained with the Illumina HiSeq 2500 (Theragen Etex Bio Institute, Suwon-si, Korea).
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