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25 protocols using ab52617

1

Western Blot Analysis of Cerebral Organoids

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RIPA fractions collected from cerebral organoids were run on a 4–20% sodium dodecyl sulfate–polyacrylamide gel (Bio-Rad), and transferred to PVDF Immobilon FL membranes (Millipore). After blocking in 5% non-fat milk in PBS, membranes were incubated overnight with primary antibodies in 5% non-fat milk/PBS containing 0.1% Tween-20. Primary antibodies and their dilutions used in this study are as follows: ABCA1 (Millipore, MAB10005, 1:1000), ABCG1 (Abcam, ab52617, 1: 1000), PhosphoPlus eIF2α (Ser51) Antibody Duet (Cell Signaling Technology, 89,117, 1:1000), Soluble frizzled-related protein 1 (SFRP1) (Invitrogen, MA5-38,193, 1:1000), β-catenin (BD Biosciences, 610,154, 1:4000), Wnt7B (Abcam, ab227607, 1:1000) and β-actin (Sigma, A2228, 1:4000). After 24 h, membranes were probed with LI-COR IRDye secondary antibodies or horseradish peroxidase-conjugated secondary antibody for 2 h, which was further detected with SuperSignal West Femto Chemiluminescent Substrate (Pierce).
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2

Western Blot Analysis of Liver and Macrophage Proteins

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Mouse liver tissues or macrophages were lysed using RIPA lysis buffer (beyotime) to obtain the protein sample. After the protein concentration was measured using a BCA kit (beyotime), certain volume of protein was mixed with loading buffer (beyotime) for boiling water bath for 3 minutes for degeneration. The proteins were subjected to electrophoresis at 80 V for 30 minutes and then at 120 V for 1–2 hours. Membrane was transferred at a current of 300 mA for 60 minutes and then washed in washing buffer for 1–2 minutes before blocking at room temperature for 1 hou or at 4℃ for overnight. The membranes were incubated with one of the primary antibodies against GAPDH (ab181602, 1:10 000), ApoM (ab85695, 1:1000), FXR1 (ab129089, 1:1000), ABCA1 (ab18180, 1:200), ABCG1 (ab52617, 1:1000) and SR‐BI (ab217318, 1:2000) (Abcam) at shaking bed at room temperature for 1 hour before washing for 3 × 10 minutes. After that, the membranes were incubated with horseradish peroxidase–labelled goat anti‐rabbit IgG (1:5000; Beijing ComWin Biotech Co., Ltd) for 1 hour and washed for 3 × 10 minutes. The membranes were observed under a chemiluminescence imaging system (Bio‐rad) after development solution was added.
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3

Cryogenic Preservation and Western Blot Analysis of Thoracic Aortic Tissue

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The thoracic aortic tissue was put into cryogenic vials, which were cryopreserved immediately in liquid nitrogen and stored at −80°C for use after completion of all sample collections.
The thoracic arteries (length 1.5  cm) were dissected and used to analyse the protein levels using Western blotting. Lysates (10–30 µg protein) were loaded onto 10% SDS-PAGE gels and blotted onto a polyvinylidene difluoride membrane. After being blocked with 5% powdered skim milk for 2 hours in phosphate-buffered saline containing 0.1% Tween 20 (PBST), the membranes were incubated with ABCA1 antibody (ab18180, Abcam, UK, 1:500), ABCG1 antibody (ab52617, Abcam, UK, 1:500) and LXRα antibody (ab41902, Abcam, UK, 1:500) overnight at 4°C, and then incubated with secondary antibody anti-rabbit/mouse-HRP (Santa Cruz Biotech, Santa Cruz, CA, 1:2000) for 1 hour at 37°C Image-Pro Plus 6.
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4

Western Blot Analysis of ABCG1 Expression

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Cells were washed twice in ice-cold PBS and harvested in RIPA buffer (ThermoFisher Scientific) supplemented with protease inhibitors. Cell lysates were centrifuged at 20,000×g for 20 min at 4 °C, and the total protein lysate was quantified using Bradford Reagent (B6916; Sigma). Then, 40 μg of total protein lysate was separated on a 4–12% Bis-Tris Plus Gel (Life Technologies) and transferred to a nitrocellulose membrane using the iBlot2 Gel Transfer Device (Life Technologies). Membranes were blocked in 0.5% non-fat dry milk and probed with anti-ABCG1 (1:1000; ab52617, abcam) and antinuclear matrix protein p84 (1:5000; ab487, abcam) primary antibodies anti-rabbit IgG (1:20,000; Ab205718, abcam), and anti-mouse IgG (1:5000; A4416, Sigma Aldrich) secondary antibodies for 1 h at room temperature. Membranes were exposed using Clarity Western ECL Substrate (Bio-Rad), and protein bands were detected on a LI-COR Imaging system with the C-DiGit Image Studio 4.0 software (LI-COR Biosciences, Ltd., UK).
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5

Western Blot Analysis of Lipid Metabolism Proteins

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Western blotting was used to detect the protein levels of Olr1, Hdlbp, Ldlr, Srebp-1c, Lp-pla2, Abcg1, Abca1, and Gapdh in RAW264.7 cells. Cells were routinely lysed to extract proteins. The extracted proteins were quantified using a BCA protein quantification kit (Thermo, USA). Conventional electrophoresis, membrane transfer, and antigen blocking operations were performed. Primary antibodies against Olr1 (dilution 1:1000; DF6522, Affinity, Melbourne, Australia), Hdlbp (1:1000; ab133594, Abcam, Cambridge, MA, USA), Ldlr (1:1000; DF7696, Affinity), Srebp-1c (1:1000; AF4728, Affinity), Lp-pla2 (1:1000; MA5-33112, Invitrogen, Carlsbad, CA, USA), Abcg1 (1:1000; ab52617, Abcam), Abca1 (1:1000; ab66217, Abcam), and Gapdh (1:5000; AB0037, Abways, Shanghai, China) were added to the incubation and incubated overnight in a box at 4 °C. The next day, the secondary antibody was added after the primary antibody was rinsed. Imaging agent (Tianneng, Shanghai, China) was added to the PVDF membrane to stain proteins. The experiments were repeated three times.
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6

Western Blot Analysis of ABCA1, ABCG1, and PKC

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Protein was extracted from cells or tissues using RIPA buffer with protease inhibitors (Sigma). Then, 5 × protein loading buffer was added to the sample at a protein: buffer ratio of 4:1, and the sample was heated in a metal bath at 60 °C for 10 min. Protein electrophoresis was performed using the TGX FastCast acrylamide kit (BIO) and then transferred to PVDF membranes (Millipore, Bedford, MA, America). After blocking in 5% skim milk for 2 h, the membrane was incubated with primary antibody (1:1000 or 1:500) in a refrigerator at 4 °C overnight. GAPDH was used as the loading control. Next, the membrane was washed in (0.1%) (TBS-T) at least three times for 10 min each and incubated with horseradish peroxidation-enhanced secondary antibody (1:10,000) for 2 h. ECL Prime (G.E.) was used to test the protein bands according to the manufacturer's instructions. The antibodies used in the experiment were as follows: GAPDH (ProMab,20,035); ABCA1 (Abcam,ab66217); ABCG1 (Abcam,ab52617); and p-PKCα (Abcam, ab32502;PKCα (Abcam, ab32376).
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7

Cholesterol Metabolism Regulation

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27-Hydroxycholesterol was provided by American Santa Cruz, and 27-OHC (10 mg) was completely dissolved in a suitable amount of ethanol, then divided equally in centrifuge tubes, with nitrogen gas blowing dry, and finally preserved at −80°C. The 27-OHC working solution contains 0.16% ethanol (v/v). Filipin III was from Cayman Chemical (#70440, Ann Arbor, MI, United States). Primary antibodies for Western blot included mouse anti-ABCA1 (Abcam, ab66217), rabbit anti-ABCG1 (Abcam, ab52617), mouse anti-Caveolin-1 (Abcam, ab17052), rabbit anti-Apolipoprotein E (Abcam, ab52607), mouse anti-LDLR (Millipore, MABS26), rabbit anti-ACAT1 (Abcam, ab168342), rabbit anti-CYP46A1 (Sigma–Aldrich, SAB2100523), mouse anti-KDEL (Santa Cruz, sc-58774), rabbit anti-flotillin (Abcam, ab41927), rabbit anti-SR-B1 (Abcam, 52629), mouse anti- N Cadherin (Abcam, ab98952), mouse anti-Aβ (Abcam, ab126649), and rabbit anti-LRP1 (Abcam, ab92544). Goat anti-mouse (#14709) and rabbit (#7074) biotinylated secondary antibodies were from Cell Signaling Technology. Antibodies for immunofluorescence included anti-CYP46A1 (Abcam, ab82814), goat anti-mouse (Abcam, ab150120), and goat anti-rabbit (Abcam, ab96899).
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8

Immunostaining of Retinal Flat Mounts

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Eyeballs were harvested from mice that were transcardially perfused with 4% paraformaldehyde and then prepared for RPE–choroid flat mounts or cryosections. The antibodies used for staining were anti-isolectin (FL-1201, 1:500; Vector Labs), anti-F4/80 (ab6640, 1:500; Abcam), anti-SULT2B1 (ab254616, 1:500; Abcam), anti-YM1 (1404, 1:500; Stem Cell), anti-ARG1 (16001-1-AP, 1:500; Proteintech), anti-LXRα (ab176323, 1:100; Abcam), anti-LXRβ (ab28479, 1:200; Abcam), anti-ABCA1 (ab18180, 1:200; Abcam), anti-ABCG1 (ab52617, 1:100; Abcam), and anti-STS (17870-1-AP, 1:500; Proteintech). Images were visualized by a fluorescence microscope (Olympus). ImageJ (National Institutes of Health, Bethesda, MD, USA) was used for analysis and quantification.
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9

Modulation of Cholesterol Homeostasis

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The following reagents were used: wortmannin (WMN, 200 nmol/L, MCE); GÖ6983 (4 µmol/L, MCE); API‐2 (1 µmol/L, MCE); mithramycin A (MTA, 200 nmol/L, Enzo); T0901317 (3 µmol/L, Sigma); 4,4′‐diisothiocyanatostilbene‐2,2′‐disulfonic acid disodium salt (DIDS, 400 µmol/L, MCE); oxidized low‐density lipoprotein (oxLDL; 50 µg/mL, Yiyuan Biotechnologies); HDL (30 µg/mL, Yiyuan Biotechnologies) and apolipoprotein A‐I (ApoA‐I; 15 µg/mL, Sigma).
The following antibodies were used: anti‐ABCA1 (ab18180, abcam); anti‐ABCG1 (ab52617, abcam); anti‐β‐actin (sc‐47778, santa cruz); anti‐SP1 (NB600‐232, Novus Biologicals); anti‐PKCζ (26899‐1‐AP, proteintech; sc‐17781, santa cruz); anti‐pPKCζ (9378, CST); anti‐α‐SMA (14395‐1‐AP, proteintech); anti‐CD11b (ab184308, abcam); anti‐GADPH (sc‐47724, santa cruz); anti‐SR‐BI (21277‐1‐AP, proteintech); anti‐CD36 (18836‐1‐AP, proteintech) and anti‐SR‐AI (sc‐166184, santa cruz).
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10

ABCA1 and ABCG1 Protein Expression

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The following reagents were purchased from commercial sources: mouse monoclonal anti-human ABCA1 antibody (Ab18180) and rabbit monoclonal anti-human ABCG1 antibody (Ab52617; Abcam, Cambridge, UK); mouse monoclonal anti-human β-actin antibody (A2228) and Oil Red O (O0625; Sigma Aldrich, St. Louis, MO, USA); ProteoExtract Native Membrane Protein Extraction Kit (M-PEK; Calbiochem, Darmstadt, Germany); Quick Start Bradford protein assay (Bio-Rad Laboratories, Hercules, CA, USA); 7% Tris-acetate gel and TaqMan® Universal PCR Master Mix (Invitrogen, Carlsbad, CA, USA); Mini Protease Inhibitors (Roche, Basel, Switzerland); Immobilon-NC Transfer Membrane (Hybond-C, Amersham International, Little Chalfont, UK); IgG-labeled goat anti-mouse secondary antibody, SP kit, and DAB color reagent (Beijing Zhongshan Golden Bridge Biotechnology Co. Ltd., Beijing, China). The mouse serum, rabbit serum, and all other reagents were from Solarbio (Beijing, China).
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