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2 protocols using anti lc3 β

1

Western Blot Analysis of Protein Signaling

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Cultural NRK-52E cells were lysed in 1 × SDS sample buffer. The kidneys were lysed with RIPA solution containing 1% NP40, 0.1%SDS, 100 mg/ml PMSF, 1% protease inhibitor cocktail, and 1% phosphatase I and II inhibitor cocktail (Sigma, St Louis, MO) on ice. The supernatants were collected after centrifugation at 13,000 × g at 4 °C for 30 min. Protein concentration was determined by bicinchoninic acid protein assay. An equal amount of protein was loaded into 10% or 15% SDS-PAGE and transferred onto polyvinylidene difluoride membranes. The primary antibodies were as follows: anti-LC3-β (cat: L7543, Sigma Aldrich, St Louis, MO), anti-cleaved caspase3 (cat: 9664, Cell Signaling Technology, Beverly, MA), anti-β-actin (cat: sc-1616, Santa Cruz Biotechnology), anti-p-AMPKα (T172) (cat: 2535, Cell Signaling Technology, Beverly, MA), anti-AMPKα (cat: 5831, Cell Signaling Technology, Beverly, MA), anti-p-S6 (S235/236) (cat: 4857, Cell Signaling Technology, Beverly, MA). Quantification was performed by measuring the intensity of the signals with the aid of National Institutes of Health Image software package.
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2

Western Blot Analysis of Autophagy and Apoptosis

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Frozen hippocampi or cultured cells were homogenized in ice-cold RIPA buffer (Beyotime Biotechnology, Jiangsu, China) containing 0.5 mM PMSF. Insoluble material was removed by centrifuging the homogenates at 16 500 g for 15 min at 4 °C. The protein concentrations of the supernatants were quantified using a BCA protein assay kit (Beyotime Biotechnology, Jiangsu, China). Protein samples were boiled for 5 min with loading buffer, and proteins (30 μg per well) were separated by 15% SDS-polyacrylamide gel electrophoresis (Beyotime Biotechnology, Jiangsu, China) and then transferred onto nitrocellulose membranes (Millipore, Watford, UK). Membranes were blocked with 5% nonfat milk in PBST for 1 hour and then incubated at room temperature with PBST solution containing 3% BSA. Subsequently, the following primary antibodies were added: anti-Atg5 (Santa Cruz, CA, USA), anti-Beclin1 (Santa Cruz, CA, USA), anti-LC3β (Sigma-Aldrich St. Louis, USA), anti- p62 (Santa Cruz, CA, USA), anti-β-actin (Santa Cruz, CA, USA), anti-caspase-3,-8,-9 (Cell Signaling Technology, MA, USA), anti-bax (Santa Cruz, CA, USA), and anti-bcl-2 (Santa Cruz, CA, USA). Membranes were washed and incubated with horseradish peroxidase-conjugated anti-IgG antibody at room temperature for 1 hour. Bands were revealed by chemiluminescence, and band intensities were quantified using ImageJ software.
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