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3 protocols using rnase p1

1

Sodium Valproate and Temozolomide Protocol

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Sodium valproate (Sanofi-Aventis, France) stock solution of 100 mg/ml in water was used to prepare the required concentration with a complete medium. Temozolomide (Merck, Germany) was dissolved in dimethyl sulfoxide (DMSO, Sigma) at a concentration of 0.103 M. [γ-P32] ATP (6000 Ci/mmol) was purchased from Hartmann Analytic GmbH (Germany), T4 polynucleotide kinase was purchased from USB (UK), micrococcal nuclease, spleen phosphodiesterase II, apyrase, RNase P1, thiazolyl blue tetrazolium bromide, and inorganic salts were purchased from Sigma Aldrich/Merck (Germany), cellulose plates and methanol were purchased from Merck (Germany), and the Genomic Mini kit for DNA isolation was supplied by A&A Biotechnology (Poland).
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2

Monoclonal and Polyclonal Antibody Production

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Anti-HA antibody 8G5F is a monoclonal antibody produced by immunizing mice with a keyhole limpet hemocyanin-conjugated HA peptide. The anti-V5 antibody was purchased from Serotec Inc. Anti-Lea1, anti-Prp5, anti-Msl5 and anti-Prp8 are polyclonal antibodies produced by immunizing rabbits with full-length recombinant protein (Lea1) or a segment of the corresponding proteins (amino acid residues 510–480 for Prp5, 273–412 for Msl5 and 1–115 for Prp8) expressed in Escherichia coli. Protein A-Sepharose CL-4B was purchased from GE Healthcare, SuperScript III from Invitrogen, proteinase K from MD Bio Inc. and RNase H from Promega. Dinucleotide 4-thio-UpG was purchased from Dharmacon. SP6 RNA polymerase was purchased from Promega, RNase P1 from Sigma, and RNasin and T4 RNA ligase 2 were from Enzymatics.
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3

Antibody Production and Purification

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Anti-V5 antibody was purchased from Serotec Inc. Anti-HA antibody was produced by immunizing mice with a keyhole limpet hemocyanin (KLH)-conjugated HA peptide (unpublished). Anti-Prp16, anti-Prp22, anti-Prp8, anti-Ntc20, anti-Yju2, anti-Cwc2 and anti-Cwc25 polyclonal antibodies were produced by immunizing rabbits with fragments or full-length recombinant Prp16 (1-298), Prp22 (1-484), Prp8 (1-115), Ntc20, Yju2, Cwc2 and Cwc25 proteins, respectively. Dinucleotide 4-thio-UpG was purchased from Dharmacon. SP6 RNA polymerase was purchased from Promega, RNase P1 from Sigma, and RNasin and T4 RNA ligase 2 from Enzymatics. Protein A-Sepharose CL-4B and IgG Sepharose were purchased from GE Healthcare. Complete, EDTA-free Protease Inhibitor Cocktail was purchased from Roche. TEV protease with a mutation (Ser219Asn) at the internal self-cleavage site was a kind gift of Hung-Ta Chen (Institute of Molecular Biology, Academia Sinica).
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