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13 protocols using anti b220 pe

1

Multiparameter Flow Cytometry Analysis

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Cells from primary and secondary immune organs were prepared by mechanical dissociation through 70-µm cell strainers (08–771-2; Corning). 1–5 million cells were blocked with anti-mouse CD16/CD32 antibody (14–0161-85, eBioscience), and stained with anti-TCRβ-biotin (13–5961-81, eBioscience) followed by incubation with SA-APC (17–4317-82; eBioscience,) and anti-CD19-PE (12–0193-81, eBioscience) for spleen and LN cells; anti-B220-PE (12–0452-82; eBioscience) for BM cells; anti-CD4-FITC (11–0041-82; eBioscience) and anti-CD8-APC (17–0081-81; eBioscience) for thymocytes; and anti-CD11b-APC (17–0112-81; eBioscience), anti-GR1-FITC (11–5931-82; eBioscience) and anti-CD11c-PE (12–0114-81; eBioscience) for myeloid cells in the presence of propidium iodide for analysis of cell death. Cells were analyzed on a FACSCalibur (BD) machine.
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2

Basophil Activation Assay for Allergy

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Whole blood samples from all control and experimental groups were collected via cheek puncture at D63 to conduct a basophil activation test (BAT) according to the method described by Torrero et al. [18 (link)]. Briefly, whole blood was incubated (1.5 h at 37°C) with RPMI-1640 medium (Lonza), αIgE (125 ng/ml, eBioscience, Breda, the Netherlands), or whey (20 μg/ml, DMV International) to activate basophils. After red blood cell lysis (Whole Blood Lysing Reagents, Beckman Coulter, Fullerton, CA, USA), cells were stained with anti-IgE-FITC, anti-CD49b-APC, anti-CD4-PE, and anti-B220-PE (eBioscience) to select the basophil population while excluding T and B cells. Median fluorescence intensity (MFI) of activation marker CD200R-PerCp-eFluor 710 was determined with flow cytometry using a FACS Canto II (BD Biosciences, Alphen a/d Rijn, the Netherlands).
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3

Multiparameter Flow Cytometry Panel

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Anti-CD45.2-FITC (104), Anti-CD8a-PerCP-Cyanine5.5 (53-6.7), Anti-CD3-FITC (17A2), Anti-CD3-APC (17A2), Anti-CD4-PE (RM4-5), Anti-NK1.1-APC (PK136), Anti-B220-PE (RA3-6B2), Anti-F4/80-PerCP-Cyanine5.5 (BM8), Anti-IFNγ PerCP-Cyanine5.5 (XMG1.2), Anti-IL5-PE (TRFK5), Anti-IL9-APC (RM9A4), and Anti-IL-10-PerCP-Cyanine5.5 (JES5-16E3) were purchased from eBioscience (Melbourne, Australia).
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4

Immunostaining of Tfh-like Cells and GCs in Mice

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The mice were deeply anesthetized and perfused transcardially with cold phosphate-buffered saline (PBS) followed by perfusion with 4% paraformaldehyde. The spinal cords and spleens were dissected carefully and cryo-protected in 30% sucrose. After embedded in optimal cutting temperature compound, the specimens were sectioned into 10-μm-thick sections using a cryostat microtome. For Tfh-like cells staining, sections were incubated in the dark with anti CD4-FITC (1:100; eBioscience), rabbit anti-mouse CXCR5 (1:500; Merck Millipore, Darmstadt, Germany), anti ICOS-PE (1:100; eBioscience), or anti PD-1-PE (1:100; BD Biosciences, San Jose, CA, USA) at 4°C overnight, followed by incubation with donkey anti-rabbit IgG-Cy5 (1:1000; Jackson ImmunoResearch Laboratories, West Grove, PA, USA) for 2 h at room temperature (RT). For GC and ELSs staining, sections were first incubated with rat anti-mouse CD35 (1:100; BD Biosciences) at 4°C overnight, followed by incubation in the dark with donkey anti-rat IgG-Cy5 (1:1000; Jackson ImmunoResearch Laboratories) for 2 h at RT. After CD35 staining, sections were blocked with 10% rats serum for 1 h at RT, and then incubated in the dark with anti CD4-FITC (1:100) and anti B220-PE (1:100; both from eBioscience) at 4°C overnight. Immuno-stained sections were visualized using confocal laser scanning microscopy (BX51, Olympus Corp., Tokyo, Japan).
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5

Immunophenotyping of Hematopoietic Cells

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Cell suspensions were incubated for 5 minutes with 10% rat serum (MP Biomedicals) and 0.2% BSA (Roche) in PBS, then stained for 30 minutes at 4°C with biotinylated lineage markers (Mac1, Gr1, CD4, CD8, B220, Ter119, IL7Rα, CD19, and CD3 with streptavidin PerCPcy5.5 as secondary), anti-Sca1-PE, anti-cKit-APC, anti-Gr1-FITC, anti-Mac1-APC, biotinylated anti-CD4 and anti-CD8 (with streptavidin APC as secondary), and/or anti-B220-PE (eBioscience and BD Biosciences). The analyzer used for flow cytometry was the BD LSR II and data was analyzed using CellQuest.
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6

Purification and FACS of mouse GC and non-GC B cells

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Spleen and PPs were dissected out from 8–12 weeks old mice, prepared into single cell suspensions and purified by EasySep® Negative Selection B cell Enrichment Kit (Stem Cell Techonologies) according to the manufacturer’s protocol. Purified B cells were stained with anti-B220-PE (1:2000) (eBiosciences), anti-CD38-APC (1:200) (eBiosciences) and anti-GL7-FITC (1:200) (Biolegend). GC (B220+GL7+CD38) and nonGC (B220+GL7CD38+) B cells were sorted from the same sample by fluorescence-activated cell sorting (FACS) in the Department of hematology/oncology flow cytometry research facility at Boston Children’s Hospital. Genomic DNA from sorted cells was prepared using a DNeasy Blood and Tissue Kit (Qiagen) according to the manufacturer’s protocol. 4 to 18 independent mice were analyzed for each category as indicated in the respective figures.
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7

Multiparameter Flow Cytometry Analysis

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Single-cell suspensions were prepared from the spleen, bone marrow, and thymus. Red blood cells were lysed by homemade RBC lysis buffer, and remaining cells were incubated with antibodies in PBS for 30 min at 4 °C and washed with PBS twice before analyzed by BD FACSAria III. Antibodies used for staining include as follows: anti-B220-PE (eBiosciences, 12-0452-83), anti-TCRβ-APC (eBiosciences, 17-5961-82), anti-CD4-PE (eBiosciences, 12-0041-85), and anti-MHCII-APC (eBiosciences, 17-5321-81). FACS results were analyzed by FlowJo.
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8

Hematopoietic Stem Cell Immunophenotyping

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Cell suspensions were incubated for 5 minutes with 10% rat serum (MP Biomedicals) and 0.2% BSA (Roche) in PBS, then stained for 30 minutes at 4°C with biotinylated lineage markers (Mac1, Gr1, CD4, CD8, B220, Ter119, IL7Rα, CD19, and CD3 with streptavidin PerCPcy5.5 as secondary), anti-Sca1-PE, anti-cKit-APC, anti-CD34-FITC, anti-CD16/32-PEcy7, anti-Gr1-FITC, anti-Mac1-APC, biotinylated anti-CD4 and anti-CD8 (with streptavidin APC as secondary), anti-B220-PE, anti-CD71-PE, and/or anti-CD36-APC (eBioscience and BD Biosciences). The analyzer used for flow cytometry was the BD LSR II and data was analyzed using CellQuest.
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9

Multicolor Flow Cytometry Panel

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Anti‐B220 Cy5, anti‐B220 Cy3, anti‐CD62L Pacific Orange, anti‐CD4 Alexa488, anti‐IgD Cy5 and anti‐Lyve‐1 Cy3 were provided by E. Kremmer (Helmholtz Zentrum München, Munich, Germany). Anti‐CD4 PerCp, anti‐CD40 APC, anti‐CD80 APC, and anti‐CD45.1 PE were purchased from Bio‐legend. Anti‐CD11b PE‐Cy7, Anti‐CD11c PE‐Cy7, anti‐CD3 PE, anti‐B220 PE, and anti‐CD45.1 FITC were purchased from eBioscience, San Diego, CA. Anti‐CD11b PE was purchased from Caltag Laboratories, Anti‐CD11c PE from BD Biosciences, and anti‐pDCA‐1 APC from Milteyni Biotec.
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10

Comprehensive Immune Cell Analysis in Murine Transplantation

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The spleen and bone marrow of the model mice and healthy recipient control mice
were harvested at the 6th or 16th week after BMT. Single cell suspensions from
spleens and bone marrows were labeled with anti-CD3 PE, -CD4 FITC, -CD8 AF700
(BD Pharmingen, San Diego, CA, USA) for T cells, anti-CD19 FITC (BD) for B
cells, anti-CXCR3 BV421 and anti-CD80 FITC for immune molecular examination,
anti-CD4 FITC (BD) and anti-Foxp3 PE (eBioscience, San Diego, CA, USA) for
regulatory T cells (Treg), anti-IFN-γ PE and -IL-17A PE-cy7 (BD) for Th1/Th17
subsets, respectively. Before detecting the secretion of IFN-γ and IL-17A in T
cells, cell suspensions were activated with anti-mouse CD3/CD28 microbeads for 3
hours. The spleen mononuclear cells of mice transplanted with A20 lymphoma cells
were stained with anti-B220 PE and -H-2Kb BV421 (eBioscience) to
examine the ratio of tumor cells. Activated human PBMCs with anti- human
CD3/CD28 beads were stained with anti-human CD3 FITC and -CD69 PE for T cell
activation analysis or with anti-human CD4 PE-cy7, -T-bet PE, -Foxp3 AF647,
-GATA3 APC and -ROR?t PE (eBioscience) for T cell differentiation analysis after
incubation with SHR0302 (1 μM) for 24 h. Fixable viability dye or DAPI (BD) were
used to distinguish live cells from dead cells.
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