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44 protocols using du145

1

Establishing Docetaxel-Resistant Prostate Cancer Cell Lines

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PCa cell lines (PC-3 and DU145) and normal human prostatic epithelial cells RWPE-1 were bought from American Type Culture Collection (Manassas, VA, USA). All cells were cultured in Roswell Park Memorial Institute (RPMI)-1640 medium (Sigma, St Louis, MO, USA) supplemented with fetal bovine serum (10%, Gibco, Rockville, MD, USA) and penicillin/streptomycin (100 U/mL, Gibco) in an incubator with 5% CO2 at 37 °C. DTX-resistant PCa cell lines (PC-3/DTX and DU145/DTX) were obtained by gradually exposing the parental cell lines (PC-3 and DU145 cells) to a medium with increasing DTX doses (Sigma) for 6 months [21 (link)]. The starting concentration of DTX was 5 nM and the final concentration was 160 nM. The medium containing DTX was changed every 2–3 days. Moreover, 10 nM DTX was used for subsequent analysis.
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2

Epigenetic Regulation of KLOTHO in Prostate Cancer

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22Rv1 (hormone-dependent prostate cancer cell line), DU145 and PC-3 (hormone-refractory prostate cancer cell line) were purchased from American Type Culture Collection and used in the study. 22Rv1 was cultured in RPMI1640 (Welgene) medium, DU145 was cultured in MEM (Welgene) medium and PC-3 was cultured in Ham’s F-12 K (Welgene) medium, and 10% FBS and Antibiotic & Antimycotic solution (Welgene) were added in those media. The incubator was maintained at 5% of CO2, proper humidity and 37°C.
The expression of KLOTHO mRNA was monitored by treating DU145 and PC-3 cell lines with 0.5, 1, 2, 5, and 10 µM of 2′-deoxy-5-azacytidine (DAC) (Invivogen), a DNA methyltransferase (DNMT) inhibitor, for 72 h or with 1 µM for 12, 24, 28,72, and 96 h. In a separate experiment, we added trichostatin A (TSA) (Sigma), a histone deacetylase, to the DU145 and PC-3 cell lines at a concentration of 25, 50, 100, 250, or 500 nM for 24 h and with a concentration of 100 nM for 6, 12, 24, and 48 h. To monitor the changes in KLOTHO expression when each cell line was treated with DAC and TSA, 1 µM DAC was applied for 72 h and 100 nM TSA was applied for 24 h to the DU145 cell line and 1 µM DAC was applied for 96 h and 100 nM TSA was applied for 24 h to PC-3 cell line. Gene expression in each cell line was investigated. The DU145 and PC-3 cell lines without DAC and TSA treatment were used as the control group.
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3

Cell Culture Conditions and Maintenance

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HeLa, MCF-7 and MDA-MB-231 cells were obtained from Sigma-Aldrich and maintained as reported previously [22 (link)]. MRC-5, PC-3, DU 145 cells were purchased from American Type Culture Collection (ATCC, Manassas, VA, USA). PC-3 and DU 145 were maintained in RPMI medium (Sigma-Aldrich) whereas MRC-5 cells were maintained in DMEM medium (Sigma-Aldrich). All media were complemented with 10% Fetal bovine serum (FBS, Sigma-Aldrich) 2 mM L-glutamine, 0.01% streptomycin and 0.005% ampicillin (Sigma-Aldrich). Cells were cultured under standard conditions in a 37 °C incubator containing 5% CO2 in 95% humidity.
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4

Prostate Cancer Cell Line Culture

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Human normal prostate stromal immortalized cell line WPMY-1 (BNCC100291) and PCa cell lines PC-3 (BNCC337715), Du 145 (BNCC338240), LNCaP (BNCC337703), and 22RV1 (BNCC100161) were bought from BeNa Culture Collection (Shanghai, China). Cells were prepared at 37℃ with 5% CO2. Culture medium information was: PC-3, Du 145, WPMY-1 cell lines in DMEM-H (BNCC338068) plus 10% FBS; LNCaP, 22RV1 cell lines in RPMI-1640 plus 10% FBS (BNCC341471). Du 145 cells were passaged in DMEM (Sigma-Aldrich) plus 10% dialyzed FBS (Gemini Bio-Products) in the methionine dependence assay. Control medium was supplemented with 100 µM l-methionine (Sigma-Aldrich), 100 µM l-cysteine (Fisher Scientific), 1.5 µM vitamin B12, and 4 mM l-glutamine. Also, 200 µM dl-homocysteine (Sigma-Aldrich) was added to the Met-Hcy+ medium. For sulfasalazine treatment, sulfasalazine (HY-14655, medchemexpress, USA) was purchased and dissolved in DMSO, and was added to the culture medium at a final concentration of 200 µM for treating PCa cells. The same amount of DMSO was supplemented to the control group for treatment [33 (link)].
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5

Prostate Cancer Cell Culturing and Wnt/β-catenin Activation

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Normal prostate epithelial cell (RWPE1) and PCa cells (DU145, LNCaP, PC-3 and C42B) were bought from American Type Culture Collection (ATCC; Manassas, VA, USA). Cells were cultured in line with previous description [15 (link)]. They were cultured with 10% FBS and 1% antibiotics in DMEM (Gibco, Rockville, MD, USA). In order to activate the Wnt/β-catenin signaling pathway, DU145 cells were treated with lithium chloride (LiCl; Sigma-Aldrich, St. Louis, MO, USA) for 24 h.
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6

Cell Culture Maintenance Protocol

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DU145, PC3 and LN229 cell lines were purchased from the ATCC and were maintained in RPMI (Gibco) medium (DU145 and PC3) or DMEM (Sigma) medium (LN229) supplemented with 10% fetal bovine serum (ATCC) and 1% of penicillin/streptomycin (Gibco) at 37 °C and 5% CO2. For experiments, cells were plated at a density of 15,000 cells/cm2 on PAA hydrogels in a volume of 100 μL to ensure that the cells were in contact with the gel.
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7

Culturing Common Prostate Cancer Cell Lines

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PC-3, 22Rv1, DU145 and LNCaP were obtained from the ATCC (ATCC-LGC Standards, Teddington, Middlesex, UK). The PC-3 cell line was cultured in F12K Kaighn’s Modified Medium (Thermo-Fisher Scientific, Ireland) and 22Rv1 and LNCaP cell lines were cultured in RPMI (Sigma-Aldrich, St. Louis, MO, USA). The DU145 cell line was cultured in Eagle’s Minimum Essential Medium (Sigma) with 2 mM l-Glutamine (Sigma). All media were supplemented with 10% FBS (Sigma), penicillin streptomycin (5,000 U/mL penicillin, 5,000 U/mL streptomycin, Sigma). All cells were cultured in a 5% CO2 humidified atmosphere at 37 °C. Cell lines were screened for mycoplasma every 6 months using the MycoAlert mycoplasma detection kit (Lonza Group Ltd., Basel, Switzerland) according to manufacturers’ instructions.
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8

Prostate Cancer Cell Line Cultivation

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Human cell lines PC3, DU145, and LNCaP were obtained from American Type Culture Collection (ATCC, Rockville, MD). LAPC4 were a kind gift from Prof. A. Cato (Institute of Toxicology and Genetics, Karlsruher Institut für Technologie, Germany). Docetaxel‐resistant PC3‐DR and DU145‐DR were previously established by Puhr et al.14 All cells were cultured in Roswell Park Memorial Institute 1640 (RPMI‐1640) (PAN Biotech, Aidenbach, Germany) containing 10% (v/v) fetal calf serum (PAN Biotech), 1% (v/v) penicillin/streptomycin and 1% (v/v) GlutaMAX (both from Lonza, Vienna, Austria). LNCaP were supplemented with 1% (v/v) 4‐(2‐hydroxyethyl)‐1‐piperazineethanesulfonic acid (HEPES) (Sigma, Vienna), 1% (v/v) d‐glucose (Sigma), 1% (v/v) Na‐pyruvate (Lonza) and LAPC4 with 100 nmol/L dihydrotestosterone (Sigma). PC3‐DR and DU145‐DR were cultured in the presence of 12.5 nmol/L Docetaxel (Sigma). The authenticity of all cell lines was validated via short tandem repeat profiling.
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9

Prostate Cancer Cell Lines and Culture

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This study used PZ-HPV-7 (an immortalized prostate epithelial cell line), CA-HPV-10 (an immortalized prostate adenocarcinoma cell line) and LNCaP, PC-3 and Du145 (metastatic prostate cancer cell lines). In addition, the HECV vascular endothelial cell line was used. All cell lines were purchased from the American Tissue Culture Collection (ATCC) (Manassas, VA, USA) at the commencement of this study. PC-3, Du145 and HECV cell lines were maintained in DMEM medium (Sigma-Aldrich, Gillingham, Dorset, UK). LNCaP clone FGC cell line was maintained in RPMI-1640 medium (Sigma-Aldrich, Gillingham, Dorset, UK). PZ-HPV-7 and CA-HPV-10 cell lines were maintained in Keratinocyte-SFM (Sigma-Aldrich, Gillingham, Dorset, UK).
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10

Comparative Analysis of Prostate Cancer Cell Lines

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Human prostate cell lines MDA-PCa-2b, DU-145 were obtained from the American Type Culture Collection. The Caucasian derived cell line, DU-145, was maintained in RPMI-1640 with 10% FBS and the African-American derived cell line, MDA-PCa-2b, was cultured in HPC1 with 20% FBS in Poly-L-Lysine (Sigma–Aldrich) coated culture dishes. Culture medium was supplemented with antibiotics and cells were cultured at 37°C with 5% CO2. African-Americans (n=41) and Caucasians (n=62) clinical FFPE (Formaldehyde Fixed Paraffin Embedded) samples were obtained from the Veterans Affair Medical Center, San Francisco, CA, USA. Additional African-American samples (n=40) were obtained from National Disease Research Interchange. Also, we used miRNA expression data from the Taylor data that is available at the Gene Expression Omnibus (GEO accession number: GSE21032).
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