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5 protocols using mirna inhibitor nc

1

Overexpression and Knockdown of circLOC101928570 in Cells

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The circLOC101928570 overexpression plasmids and empty vector were constructed and designed by GeneChem (Shanghai, China). The miR-150-3p mimics, miR-150-5p mimics, miR-150-3p inhibitor, miR-150-5p inhibitor, miRNA mimics NC, and miRNA inhibitor NC were chemically synthesized by Riobio (Guangzhou, China). The pCDH-CMV-MCSEF1- GFP + Puro (CD513B-1) vector was used as a negative control plasmid, and the pCDH-MYB plasmid was fragmented and inserted into the pCDH-CMV-MCSEF1-GFP + Puro (CD513B-1) vector with BamHI and NotI restriction sites. The vector construction results were verified by direct sequencing. The sequence used was 5 ‘-CCGGAATTCCGGGAAAGCGTCACTTGGGGAAAA-3’. PLKO.1-puro (Addgene plasmid # 8453) was used to design short hairpin RNA, and the cells were transfected with Lipofectamine 3000 (Invitrogen, United States). The transfection process lasted 48 h.
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2

Osteogenic Differentiation of hBMSCs Using miR-619-5p

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hBMSCs were seeded in the 6-well plate at a density of 6×104, and the cells reached 70% confluence after about 48 h. According to the manufacturer’s instructions, miR-619-5p mimic and miRNA mimic NC (RiboBio, Guangzhou, China) were transfected with Lipofectamine 3000 transfection reagent (Invitrogen, US) at a concentration of 50 nM, and miR-619-5p inhibitor, miRNA inhibitor NC (RiboBio, Guangzhou, China) at a concentration of 100 nM. RNA was extracted 24 h after transfection, the protein was extracted 48 h for detection, and osteogenic induction solution was added for osteogenic induction differentiation. Transfection was performed again after 3 days. MiR-619-5p mimic and miR-619-5p inhibitor sequence are listed in Supplementary Table S5.
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3

Regulating HOTAIR and miR-145-5p in Liver Cancer

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Liver cancer cells were inoculated in culture dishes 24h prior to transfection. For enhance or decreased expression of HOTAIR and miR-145-5p. Short hairpin RNA (shRNA) (5'-GAACGGGAGTACAGAGAGA-3') sequences targeting human HOTAIR and a non-target sequence (sh-NC) (5'-TTCTCCGAACGTGTCACGT-3') were constructed by GenePharma (Shanghai, China). A full-length human HOTAIR expression vector was purchased from Addgene (LZRS-HOTAIR, #26110). The negative control for LZRS-HOTAIR is LZRS vector. Si-NC (sence 5'-UUCUCCGAACGUGUCACGUTT-3', antisense 5'-ACGUGACACGUUCGGAGAATT-3'), Si-EZH2 (sense 5'-GCUAAGGCAGCUGUUUCAGTT-3', antisense 5'-CUGAAACAGCUGCCUUAGCTT-3'), miR-145 mimics (sence 5'-GUCCAGUUUUCCCAGGAAUCCCU-3', antisence 5'-CAGGUCAAAAGGGUCCUUAGGGA-3'), miRNA mimics NC (sence 5'-UUUGUACUACACAAAAGUACUG-3', antisense 5'-AAACAUGAUGUGUUUUCAUGAC-3'), miR-145 inhibitor (5'-AGGGAUUCCUGGGAAAACUGGAC-3'), and miRNA inhibitor NC (5'-CAGUACUUUUGUGUAGUACAAA-3') were synthesized from Ribobio (Guangzhou, China). NUAK1 inhibitor (HTH-01-015) was purchased from MCE (Shanghai, China). The vectors and microRNAs were transfected into SNU-387 and HepG2 cells using lipofectamine 3000 reagents following the instructions (invitrogen, USA).
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4

Regulation of CircRNA 0000376 in Cells

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Small interfering RNA against circ_0000376 (si-circ_0000376, 5′-TCCATATGAGAGTTGGATTCT-3′; si-circ_0000376#2 5′-TATCCATATGAGAGTTGGATT-3′), the small hairpin RNA against circ_0000376 (sh-circ_0000376), miR-545-3p mimic (5′-UCAGCAAACAUUUAUUGUGUGC-3′), miR-545-3p inhibitor (5′-GCACACAAUAAAUGUUUGCUGA-3′), the overexpression plasmid of PDPK1 (pc-PDPK1), and controls (si-NC, sh-NC, miR-NC, miRNA inhibitor-NC, and pc-NC) were provided by Ribobio Co., Ltd (Guangzhou, China). Cell transfection was performed using TurboFect reagent (Thermo Fisher, Waltham, MA, USA) based on the instruction of the manufacturer.
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5

MicroRNA Mimic and Inhibitor Transfection

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The miR-338-3p mimic, miR-338-3p inhibitor, miRNA mimic NC, and miRNA inhibitor NC were purchased from RiboBio (Guangzhou, China). Transfection was carried out using according to the manufacturer’s instructions.
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