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6 protocols using ecl chemiluminescence kit

1

Immunoblotting Analysis of Macrophage Proteins

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The mouse corneal or peritoneal macrophages were fully lysed for 2 h using RIPA solution (Solarbio, Beijing, China) containing 1% each of protease inhibitors (PMSF) and phosphatase inhibitors. Protein concentrations were measured using the BCA kit (Solarbio). After the inclusion of SDS sample buffer (Elabscience, Wuhan, China), the samples were subjected to boiling, and protein separation was performed using a 12% SDS-PAGE gel. Subsequently, the separated proteins were transferred onto PVDF membranes (Solarbio). The membranes were then treated with a protein-free rapid-blocking buffer (1x, Yamei, Shanghai, China). Blocking was performed for 15 min, followed by overnight incubation with primary antibodies diluted in primary antibody diluent: HMGB1 antibody (1:1,000; Abcam), LOX-1 antibody (1:3,000; Proteintech), GADPH antibody (1:5,000; Elabscience), β-actin antibody (1:1,000; Elabscience). After a PBST shaken wash, the membranes were incubated with a secondary antibody diluted in secondary antibody diluent (1:5,000, Elabscience) for 60 min. Finally, the visualization of protein bands was achieved by employing an ECL chemiluminescence kit (Vazyme Biotech, Nanjing, China).
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2

Western Blot Analysis of Protein Samples

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Cells or tissue homogenate were lysed with RIPA lysis buffer containing PMSF, protease and phosphatase inhibitor cocktail. The protein concentration of each sample was quantified by BCA protein quantification assay kit (Vazyme, E112-01). Twenty μg of lysate was separated using SDS-PAGE gels and transferred to PVDF membranes (Millipore). The membranes were blocked with 5% skim milk in TBST for 1 h at room temperature and probed with indicated primary antibody overnight at 4 °C. The next day, PVDF membranes were incubated with anti-mouse or anti-rabbit antibody for 1 h, after which the membranes were treated with ECL Chemiluminescence Kit (Vazyme, E423) and visualized in Tanon 4600 image system. Antibodies against β-actin (AC038), PARP1 (A0942), Lamin B (A16909), FLAG (AE092), γ-H2AX (Ser139) (AP0099), GAPDH (AC001), HIS (AE028) were from ABclonal, while antibody against PAR (ALX-804-220-R100) was from Enzo Life Sciences.
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3

Histone Modification Analysis by Western Blot

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Cells were washed with PBS after collection and lysed in SDS lysis solution supplied with protein inhibitor cocktail (Beyotime, P0013G) on ice for 5 min. Lysates were centrifuged at 12 000 rpm for 10 min at 4 °C. The supernatants were mixed with 5X loading buffer (Beyotime, P0015) and boiled at 95 °C for 15 min. Proteins were separated by SDS‐PAGE with 15% percentage gels, transferred to PVDF membranes (Bio‐Rad, 1620177) and blocked in 5% skim milk in TBST (20 mm Tris, 150 mm NaCl, and 0.1% Tween‐20) for 1 h. Membranes were incubated in TBST with primary antibodies (H3K27me3(CST, C36B11), H3K4me3(Abcam, ab213224), H3K27Ac (Abcam, ab177178) and Histone H3(Abcam, ab1791)) at 4 °C overnight. After washed with TBST 3 times, membranes were incubated in TBST with horseradish peroxidase (HRP) conjugated anti‐rabbit secondary antibody at room temperature for 1 h. After being washed with TBST 3 times, protein bands were visualized in Western Blot imaging system with ECL chemiluminescence kit (Vazyme, E422‐01) and quantified using ImageJ.
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4

Immunoblotting Analysis of MAPK Signaling

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After 2 h of exposure to DON, IPEC-J2 cells were collected and lysed in cell lysis buffer (Beyotime, Haimen, China). Protein concentrations were determined using a BCA protein assay kit (Beyotime, China). Proteins were separated by electrophoresis and transferred to PVDF membranes. Anti-phospho-p38 (1:1000), anti-p38 (1:1000), anti-phospho-JNK (1:1000), anti-JNK (1:1000), anti-phospho-ERK (1:2000), anti-ERK (1:1000) and anti-β-actin antibodies were used as primary antibodies. Proteins bound by the primary antibodies were visualized with an appropriate secondary antibody (1:5000) and then detected by an ECL Chemiluminescence kit (Vazyme, E411-05). Protein bands were quantified using NIH ImageJ software (available in the public domain) and detected using a Bio-Rad imaging system (Bio-Rad, Hercules, CA, USA).
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5

Exosomal Protein Extraction and Analysis

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Protein extraction from exosomes performed using radioimmunoprecipitation assay buffer supplemented with protease inhibitors (Sigma-Aldrich, St. Louis, MO). The protein samples were separated by 10% sodium dodecyl sulfate – polyacrylamide gel electrophoresis (Beyotime, Shanghai, China) and subsequently transferred onto PVDF membranes (Life Technology, Waltham, MA). After blocking with 5% skim milk at room temperature for 1 hour, the membranes were incubated overnight at 4°C with the appropriate primary antibodies, CD63 (1:1000 dilution, CST, #52090), CD9 (1:500 dilution, CST, #98327), and Alix (1:1000 dilution, CST, #92880). Following the primary antibody incubation, the membranes were incubated with the corresponding secondary antibody for an additional 1 hour at room temperature. Protein bands were visualized using an ECL chemiluminescence kit (Vazyme, Nanjing, China) according to the manufacturer’s instructions.
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6

Western Blot Protein Extraction and Analysis

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The TNC tissues were homogenized in radioimmunoprecipitation (RIPA) lysis buffer (P0013B, Beyotime) using an electric homogenizer and supplemented with a mixture of phenylmethylsulfonyl fluoride (PMSF, ST506, Beyotime) and protease phosphatase inhibitors (P1045, Beyotime). The homogenate was then incubated at 4 °C for 2 h. After incubation, the homogenate was centrifuged at 16,000 rpm and 4 °C for 20 min, and the resulting supernatant was collected as the whole-cell protein extract. The protein concentration was determined using a bicinchoninic acid (BCA) protein assay kit (P0010, Beyotime). Equal amounts of protein were loaded onto a sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE) gel and electrophoresed. The separated proteins were then transferred to a polyvinylidene fluoride (PVDF) membrane. Subsequently, the membrane was blocked with 5% fetal bovine serum (BSA) at 37 °C for 2 h. Primary antibodies (Supplementary Material 1) were incubated overnight at 4 °C. The membrane was washed three times with tris-buffered saline Tween-20 buffer (TBST) and incubated with a horseradish peroxidase (HRP)-labeled secondary antibody (Supplementary Material 1) at 30 °C for 1 h. Immunoblotting was performed using a blot test kit (SuperFemto ECL Chemiluminescence Kit, Vazyme, E423-02), and the protein bands were visualized using an imaging system (Tanon-5200, China).
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