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7 protocols using mimcd3 cells

1

Rac1 Knockdown in mIMCD3 Cells

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mIMCD3 cells, purchased from ATCC, were incubated in Dulbecco’s Modified Eagle’s Medium:Nutrient Mixture F-12 (Thermo Fisher) supplemented with 5% FBS in 5% CO2 at 37 °C. Initial osmolality of the medium was around 300 mOsm/kg. In the experiment involving hyperosmotic stress, NaCl or sorbitol was added to increase the osmolality of the medium by 150 mOsm/kg. Transfection of the mouse Rac1 siRNAs (Stealth RNAi, Rac1MSS237708, Thermo Fisher; and Silencer Select RNAi, s72647, Thermo Fisher) and the corresponding scrambled siRNAs (Stealth RNAi siRNA Negative Control Hi GC, Thermo Fisher; and Silencer Negative Control No. 1 siRNA, Thermo Fisher) was performed with Lipofectamine RNAiMAX (Thermo Fisher) using a reverse transfection protocol.
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2

Culturing and Treating mIMCD3 Cells

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The mIMCD3 cells (mouse inner medullary collecting duct cells) were purchased from ATCC, cultured with RPMI 1640 medium containing 10% fetal bovine serum, incubated in 37 °C provided with 5% CO2 and 95% air. Before treatment, the cells were planted into 6 well plates until adhering to the bottom. Then culture medium was replaced and drug containing medium was added, incubating for 24 hours and cell number was multiplied. After rinsing with phosphate buffered saline for 3 times, cells were kept in −80 °C refrigerator.
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3

Culturing Various Cell Lines

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The 293 HEK cells without T antigen (Doug Black, University of California, Los Angeles [UCLA], Los Angeles, CA), MDCK cells (clone M8; Frisch and Francis, 1994 (link)), and HT1080 cells (American Type Culture Collection [ATCC], Manassas, VA) were cultured in advanced DMEM (Life Technologies, Carlsbad, CA) with 10% fetal bovine serum (FBS; Hyclone, Chicago, IL) and 1× penicillin-streptomycin-glutamine (PSG) (Invitrogen, Carlsbad, CA). miMCD-3 cells (ATCC) were cultured in advanced DMEM:Ham’s F-12 (Life Technologies) with 10% FBS and 1× PSG. The HMLE and HMLE MSP cells were described previously (Cieply et al., 2013 (link)).
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4

Culturing HEK293 and mIMCD3 Cells

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HEK293 and mIMCD3 cells (ATCC) were cultured in DMEM/F12 (Life Technologies) with 10% FBS and 100 units/ml penicillin/100 μg/ml streptomycin.
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5

Propagation of mIMCD-3 Kidney Cells

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mIMCD-3 cells (ATCC CRL-2123) cultured in DMEM/F12 medium (Thermo Fisher Scientific) supplemented with 10% FBS, at 37°C in 95% air and 5% CO2. For subculture of cells in 75 cm2 flasks, monolayers were washed in 5 ml Dulbecco’s phosphate-buffered saline (DPBS). Cells were detached by incubation with 2 ml 0.25% (w/v) trypsin-EDTA at 37°C for 5–15 min. Cells were dispersed in 6 ml medium and pelleted by 5 min centrifugation at 200 g. Trypsin-containing medium was aspirated and cells re-suspended in fresh medium and seeded in a new 75 cm2 flask in a 1:10 ratio. Reagent volumes were scaled for subculture in vessels of varying sizes.
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6

Dual-Luciferase Reporter Assay in mIMCD-3 Cells

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mIMCD-3 cells (ATCC) grown to 90%–95% confluence in 24-well plates were transfected using Lipofectamine 2000 Transfection Reagent (Thermo Fisher Scientific, Cat. No. 11668030). The transfection efficiency was normalized using the Renilla pRL plasmid (15 ng), and the total quantity of transfected DNA was kept constant using pcDNA3.1 (+) Mammalian Expression Vector (Thermo Fisher Scientific, Cat. No. V79020). Between 48 and 72 h after transfection, luciferase activity was measured using the Dual-Luciferase Reporter Assay System (Promega, Cat. No. E1910) according to the manufacturer’s instructions. The luminometer was programmed to perform a 2-s premeasurement delay, followed by a 10-s measurement period for each reporter assay. After measurement of the firefly luciferase activity, Stop & Glo Reagent was added to each sample and enzymatic activity of Renilla luciferase was measured.
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7

Characterization of FPC Intracellular Domain

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The hICD construct containing the intracellular domain of human FPC (192 aa) was described previously [9] (link). The hTMC construct containing the human FPC C-terminal 225 aa was made by RT-PCR and cloned into pcDNA4 at Hind III/Xba I sites (Figure S1). For the establishment of stable cell lines, hICD construct or empty vector was transfected with FuGENE6 (Roche, Madison, WI, USA) into mIMCD-3 cells (ATCC, Bethesda, MD, USA) cultured in DMEM/F12 media (Cellgro, Manassas, VA, USA), supplemented with 10% FBS (Invitrogen), and screened for cells resistant to Zeocin (Invitrogen, 750 µg/ml). For amino acid deprivation condition, cells were serum-starved for 16 h and then cultured in DMEM/F12 media without amino acids for 30 min. For drug treatments, stable cells were incubated with culture media containing appropriate chemical reagents for a period of time as specified in the Results. FPC knockdown cells were described previously [13] (link). Different amounts of hICD expression construct DNA were transiently transfected into LLC-PK1 cells stably expressing full-length FPC or empty vector control cells P4L [12] (link). Two days after transfection, cells were harvested for western blotting analyses.
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