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Enhanced chemi luminescence (ecl)

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ECL (Enhanced Chemiluminescence) is a laboratory instrument used for the detection and quantification of proteins in Western blot analysis. It utilizes a chemiluminescent substrate to generate a light signal proportional to the amount of target protein present in the sample. This technique allows for the sensitive and specific detection of proteins within a complex mixture.

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1 121 protocols using enhanced chemi luminescence (ecl)

1

Transcriptional and Protein Analysis

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Transcriptional assays at individual loci using RT- and RT-qPCR were carried out essentially as in [34 (link)]: primer sequences are listed in Additional file 1: Table S1. Protein was extracted from cells growing in log phase using protein extraction buffer (50 mM Tris–HCl, 150 mM NaCl, 1% Triton-X, 10% glycerol, 5 mM EDTA; all Sigma-Aldrich) and 0.5 µl protease inhibitor mix (Sigma-Aldrich). For Western blotting, 30 μg protein was denatured in the presence of 5 μl 4× LDS sample buffer (Invitrogen) and 2 μl 10× reducing agent (Invitrogen) in a total volume of 20 μl nuclease-free water (Qiagen) via incubation at 70 °C. Proteins were separated by SDS-PAGE and then electroblotted onto a nitrocellulose membrane (Invitrogen) and blocked in 5% non-fat milk for 1 h at room temperature (RT). Membranes were incubated with anti-DNMT1 (a kind gift from Guoliang Xu) and anti-β-actin (Abcam ab8226) overnight at 4 °C, followed by HRP-conjugated secondary antibody incubation at RT using ECL (Invitrogen).
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2

Nuclear and Cytoplasmic Protein Extraction

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The NE-PER™ Nuclear and Cytoplasmic Extraction Reagents kit (ThermoFisher, United States) was utilized to extract nuclear and cytosolic protein fractions (Cao et al., 2004 (link)). GAPDH and TFIIA-α were used to control equal loading of cytoplasmic and nuclear fractions, respectively. For immunoblotting, the corresponding proteins were electrophoresed on 10% SDS-PAGE and transferred onto nitrocellulose membranes. The membranes were blocked with 5% dry milk in PBS-Tween buffer (0.1% Tween 20; pH7.5) for 60 min and incubated with primary antibodies to TGF-β1 (Santa Cruz, CA, United States), Smad3, and p-Smad3 (Ser423/425) (Cell Signaling Technology, Beverly, MA, United States), respectively, for 3 h at room temperature. After five washes with TBST and two washes with TBS, the membrane was incubated for 1 h at room temperature with horseradish peroxidase-conjugated secondary antibody (Abcam). Following another two washes with TBST, labeled proteins were visualized using ECL (Invitrogen, Carlsbad, CA) on high-performance chemiluminescence film. The intensity of the bands was quantified by densitometry with image analysis software. Smad3 nucleus translocation was determined as the percentage of protein content in the nucleus versus cytoplasm.
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3

Western Blot Analysis of Autophagy Markers

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BV2 microglia were washed rapidly with ice-cold PBS, scraped, and collected. Cell pellets were lysed with ice-cold RIPA buffer (Sigma-Aldrich, St. Louis, MO, USA). The lysates were centrifuged at 12,000 rpm for 30 min at 4℃ to produce whole-cell extracts. Protein content was quantified using the BCA method (Pierce, Rockford, IL, USA). Proteins (40 µg) were separated on a 10% SDS-polyacrylamide (PAGE) gel and transferred onto a polyvinylidene difluoride (PVDF) membrane. After blocking with 5% bovine serum albumin, prepared in Tris-buffered saline/Tween (TBS-T; 20 nM Tris [pH 7.2], 150 mM NaCl, and 0.1% Tween 20), for 1 h at room temperature, immunoblots were incubated overnight at 4℃ with primary antibodies that specifically detect BECLin-1 (1 : 1,000, Millipore, Billerica, MA, USA), ATG3 (1 : 1,000, Abcam, Cambridge, MA, USA), LC3II (1 : 1,000, Cell Signaling Technology, Danvers, MA, USA), and β-actin (1 : 2,000, Cell Signaling Technology, Danvers, MA, USA). Next, blots were incubated with HRP-linked anti-rabbit IgG antibodies purchased from Abcam (Abcam, Cambridge, MA, USA) for 1 h 30 min at room temperature. Enhanced chemiluminescence was performed by ECL (Invitrogen, Carlsbad, CA, USA) [49 (link)].
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4

Quantitative Protein Analysis of Cyclin D1

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Proteins were extracted from H2170 cells using RIPA solution (Invitrogen). After quantification using BCA assay (Invitrogen), the same amount of proteins were denatured at 95 °C for 10 min, separated by electrophoresis on SDS-PAGE gels, and transferred onto PVDF membranes. The membranes were incubated with 5% fat-free milk (PBS) at room temperature for 2 h before incubation with primary antibodies against cyclin D1 (ab194972, Abcam) and GAPDH (ab9845, Abcam) for 16 h at 4 °C. After that, the membranes were incubated with HRP IgG secondary antibody (ab6721, Abcam) for 3 h at 25 °C. Protein signals were developed using ECL (Invitrogen), detected, analyzed, and normalized to the control using Quantity One software.
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5

Western Blot Analysis of Inflammasome Proteins

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Brain tissues or treated cells were lysed with RIPA buffer supplemented with phosphatase and protease inhibitors and were then collected for protein extraction. The protein concentration was determined using a BCA kit. An equal amount of protein samples was loaded on sodium dodecyl sulfate (SDS)-polyacrylamide gel for electrophoresis at 120 V for 90 min. Subsequently, proteins were transblotted onto polyvinylidene fluoride (PVDF) membranes by wet transfer (400 mA, 90 min). The membrane was blocked by 5% non-fat milk in Tris-buffered saline with Tween-20 (TBST) for 2 h at room temperature and then incubated overnight at 4 °C with the primary antibodies (ChemR23, PA5-50932, 1:500, Invitrogen, USA; NLRP3, GB114320, 1:1000, Servicebio, China; apoptosis-associated speck-like protein containing a CARD (ASC), 10500-1-AP, 1:1000, Proteintech, IL, USA; Caspase-1 p20, AG-20B-0042, 1:1000, AdipoGen, Switzerland; GSDMD-N terminal (GSDMD-N), GB114198, 1:1000, Servicebio, China; tubluin, 11224-1-AP, 1:1000, Proteintech, IL, USA). After washing with TBST, the membranes were incubated with the secondary antibody (anti-rabbit and mouse IgG, 1: 5000; Santa Cruz Biotechnology, USA) for 2 h at room temperature, and then reacted with enhanced chemiluminescence (ECL, Invitrogen, USA). The result of chemiluminescence was recorded and analyzed with ImageJ software.
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6

Protein Extraction and Quantification from BM-MSCs

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The total protein from BM‐MSCs was extracted using radio immunoprecipitation assay buffer (50 mM Tris‐HCl, pH 7.4,1% NP‐40, 150 mM NaCl, and 0.5% sodium deoxycholate). A Bicinchoninic Acid Protein Assay Kit (Thermo Fisher Scientific) was then used to determine the protein concentration. Total protein samples of cells were separated by 10% sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS‐PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes (Millipore). The membranes were incubated with rabbit monoclonal anti‐PKD1 antibody (1:1000; Abcam; ab51246), and rabbit polyclonal anti‐c‐MYC antibody (1:1000; CST; #9402) and anti‐Sirt1 antibody (1:1000; CST; #2493) overnight at 4°C. After being washed, the membranes were incubated with the corresponding horseradish peroxidase‐conjugated secondary antibody for 1 h at 25°C. Protein blots were visualized using enhanced chemiluminescence reagents (ECL; Invitrogen) and quantified using ImageJ software. A rabbit monoclonal anti‐Actin antibody (1:1000; Abcam; ab179467) was used to correct for loading.
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7

Protein Expression Analysis of hsa-miR-9-5p

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Cells from the control group, hsa-miR-9-5p agomir group and NC group were
lysed using RIPA buffer (Dingguo, Beijing, China), ultrasonically
disrupted and centrifuged at 4 C for 30 min at 10,000 rpm. The protein
content was determined by BCA (Dingguo, Beijing, China) method. 50 µg
of protein were separated using 10% SDS-PAGE and then transferred to
PVDF membranes (Dingguo, Beijing, China). After being blocked with 4%
bovine serum albumin (BSA) for 1 h, the membranes were incubated with
rabbit anti-human HK2 antibody (AF7080, 1:250, Beyotime, Shanghai,
China) overnight at 4 C. Then, the secondary antibody (1:1 000, Santa
Cruz, California, USA) was incubated at 4°C for 1 h and the gel
imaging system ECL (Invitrogen, USA) was used for luminescence
development.
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8

Kidney Protein Expression Analysis

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Kidney tissues were lysed and subsequently sonicated in RIPA buffer that contained 250 μM phenylmethanesulfonyl fluoride (PMSF), 2 mM EDTA, and 5 mM dithiothrietol (DTT) (pH 7.5). Protein concentrations were determined by the use of Coomassie reagent. 40 μg of protein of each sample was denatured in boiling water for 10 min, then separated by SDS-PAGE, and transferred onto PVDF membranes. The blots were blocked with 5% nonfat dry milk in Tris-buffered saline (TBST) for 1 h, followed by overnight incubation with the primary antibody. After washing with TBST, blots were incubated with goat anti-rabbit horseradish peroxidase (HRP)-conjugated secondary antibody and visualized using Enhanced Chemiluminescence (ECL, Cat#: 32106, Invitrogen). The blots were quantitated by using ImageJ 1.38 (NIH, USA). Primary antibodies were as follows: rabbit anti-NHE3 antibody (Cat#: SPC-400D, Stressmarq Biosciences INC.), rabbit anti-α-ENaC antibody (Cat#: SPC-403D, Stressmarq Biosciences INC.), rabbit anti-β-ENaC antibody (Cat#: SPC-404D, Stressmarq Biosciences INC.), rabbit anti-γ-ENaC antibody (Cat#: SPC-405D, Stressmarq Biosciences INC.), rabbit anti-NCC antibody (Cat#: NBP1–44270, Novus Biologicals.), rabbit anti-NKCC2 antibody (Cat#: 38436S, Cell Signaling Technology), and rabbit anti- GAPDH (Cat#: 2118L, Cell Signaling Technology).
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9

Western Blot Analysis of Collagen I

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Kidney tissues were lysed and subsequently sonicated in RIPA buffer that contained 250 μM phenylmethanesulfonyl fluoride (PMSF), 2 mM EDTA, and 5 mM dithiothrietol (DTT) (pH 7.5). Protein concentrations were determined by the use of Coomassie reagent. 50 μg of protein for each sample were denatured in boiling water for 10 min, then separated by SDS-PAGE, and transferred onto PVDF membranes. The blots were blocked with 5% nonfat dry milk in Tris-buffered saline (TBST) for 1 h, followed by overnight incubation with the primary antibody. After washing with TBST, blots were incubated with goat anti-rabbit or donkey anti-goat horseradish peroxidase (HRP)-conjugated secondary antibody and visualized using Enhanced Chemiluminescence (ECL, Cat#: 32106, Invitrogen). The blots were quantitated by using ImageJ 1.38 (NIH, USA). Primary antibodies were as follows: goat anti-Collagen I antibody (Cat#: 1310–01, SouthernBiotech), and rabbit anti-GAPDH (Cat#: 2118L, Cell Signaling Technology).
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10

Western Blot Protein Analysis Protocol

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Cells were lysed using RIPA buffer with 1% phenylmethanesulfonyl fluoride (Beyotime Biotechnology, Jiangsu, China). Protein concentration was measured using the BCA Protein Assay Kit (Invitrogen, Waltham, MA, USA). Protein (20 µg) was separated on 12% SDS-PAGE, and then transferred to PVDF membranes (Merck Millipore, Tullagreen, Carrigtwohill, Co. Cork, Ireland). Membranes were blocked with 5% skim milk for 1 h and washed three times with TBST. The membranes were incubated overnight with primary anti-HBx (#ab39716; 1:1000; Abcam, Cambridge, MA, USA) and anti-β-actin antibodies (#BM0627; 1:20000; Boster, Wuhan, China) at 4 °C. Then, membranes were washed and incubated with HRP-conjugated secondary antibody at room temperature for 1 h. Proteins were visualized by ECL (Invitrogen, Waltham, MA, USA).
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