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5 protocols using anti p62 18420 1 ap

1

Antibody Identification for Parkin Pathway

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The antibodies used in this study were as follows: anti-Parkin (4211S), anti-TOM20 (42406S), anti-LC3 (12741S), anti-Cleaved caspase-3 (9664S), anti-GAPDH (5174S) and anti-COX IV (4850P) from Cell Signaling Technologies; anti-TIM23 (11123-1-AP), anti-OPTN (10837-1-AP), and anti-p62 (18420-1-AP) from Proteintech; and anti-PINK1 (P0076) from Sigma-Aldrich. All secondary antibodies were purchased from Thermo Fisher Scientific. Lipopolysaccharide (LPS) was purchased from Sigma Aldrich.
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2

Western Blot Analysis of Cellular Proteins

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A total of 3 × 106 cells, previously washed in PBS, precipitated protein from supernatant cell culture, or animal tissues were lysed in 90 μL, 30 μL or 250 μL of RIPA buffers, respectively: RIPA Lysis Buffer with 100X protease inhibitors (Thermo Fisher Scientific). The lysates were incubated on ice for 1 h. The samples were centrifuged at 13,000 rpm for 15 min at 4 °C and the supernatant was collected in 4x Laemmli Sample Buffer (Bio-Rad, Hercules, CA, USA). Samples were loaded on a 7–14% gradient acrylamide gel (Bio-Rad), using 10× Tris/Glycine/SDS as a running buffer and the Bio-Rad electrophoresis system. The gels were transferred to PVDF membranes and blocked with 5% milk in TBS-Tween for 1 h. The membranes were incubated with different primary antibodies: anti-GAA (A7674-50, Abclonal Woburn, MA, USA), anti-p62 (18420-1-AP, Proteintech, Rosemont, IL, USA), anti-LAMP-1 (14-1071-82, Invitrogen Carlsbad, CA, USA) and anti-ERK1,2 (06-182A, Merck Millipore, Burlington, MA, USA) at 4 °C overnight and incubated with the secondary antibodies: goat anti-rabbit IRDye® 800CV and donkey anti-rabbit IRDye® 700CV (LI-COR) for 1 h. The membranes were scanned with the Odissey® system (LI-COR, Lincoln, NE, USA).
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3

Immunohistochemical Analysis of Metabolic Markers

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Immunohistochemical (IHC) analyses were performed according to our previous study.2 (link) The sections were then incubated with primary antibodies anti-LC3 (#27751, 1:100, Signaling Technology), anti-p62 (18420-1-Ap, 1:100, Proteintech, Rosemont, Ill.), anti- hexokinase 2 (HK2;22029-1-Ap, 1:100, Proteintech), antiglucose transporter 1 (GLUT1;ab115730, 1:100, Abcam), and the same antibodies used in western blotting [ie, anti-PKM1 (1:25), PKM2 (1:200), and PTBP1 (1:100)]. The labeled sections were observed and captured using a fluorescent microscope (BZ-X800, Keyence, Osaka, Japan).
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Proteomic Analysis of Pancreatic Cells

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Total proteins of pancreatic tissue and PACs were extracted using RIPA lysis buffer (89901, Thermo Fisher Scientific) with protease inhibitors (11873580001, Roche, Basel, Switzerland) and phosphatase inhibitors (B15001, Bimake, Houston, TX) and determined by Bradford assay (500-0205, Bio-Rad, Hercules, CA). The following antibodies were used: anti-Caspase-1 (sc-56036, Santa Cruz Biotechnology, San Lucas, CA), anti-ORAI1 (ab59330, Abcam, Cambridge, England), anti-SARAF (PA5-77334, Thermo Fisher Scientific), anti-TRPC3 (A7742, ABclonal, Wuhan, China), anti-LC3A/B (12741, Cell Signaling Technology, Danvers, MA), anti-STIM1 (5668, Cell Signaling Technology, Danvers, MA), anti-P62 (18420-1-AP, ProteintechGroup, Wuhan, China), anti-TRPC6 (18236-1-AP, ProteintechGroup), and anti-tubulin (10094-1-AP, ProteintechGroup).
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5

Antibody Sources for Protein Analysis

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Anti-VDR (sc-13133), Anti-Parkin (sc-32282), and Anti-β-Actin (sc-8432) were brought from Sigma-Aldrich. Anti-HA-Tag (#2367) and Anti-LC3 (#4108) were from Cell Signaling Technology. Anti-MYC-tag (10828-1-AP), Anti-GAPDH (60004-1-Ig), and Anti-P62 (18420-1-AP) were from Proteintech. Anti-FLAG was brought from Sigma(F7425). Anti-laminB (AF1408) was brought from Beyotime Biotechnology. DSS (DB001-38) was from TdB Consultancy. Anti-Cy3-AffiniPureGoat Anti-Mouse IgG (H+L), Anti-Cy3-AffiniPure Goat Anti-Rabbit IgG (H+L), Anti- FITC-AffiniPure Goat Anti-Mouse IgG (H+L), and Anti- FITC-AffiniPure Goat Anti-Rabbit IgG (H+L) were from Jackson ImmunoResearch.
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