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Protein block solution

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Sourced in United States, Denmark, Sao Tome and Principe

Protein block solution is a laboratory reagent used to prevent non-specific binding in immunoassays and Western blotting techniques. It contains a mixture of proteins and surfactants that help to block unoccupied binding sites on the solid support, reducing the risk of false-positive results.

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78 protocols using protein block solution

1

Immunohistochemistry and Immunofluorescence Protocols

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Immunohistochemistry (IHC) was performed as previously described Wang et al., 2017 (link)). Briefly, tumors embedded in paraffin blocks were deparaffinized, and hydrated through an ethanol series. After microwave antigen retrieval in DakoCytomation target retrieval solution pH 6 (Dako), slides were incubated in 0.3% hydrogen peroxide solution in methanol for 15 min at room temperature to inhibit internal peroxidase activity. Next samples were blocked with serum-free protein block solution (Dako) and incubated with corresponding primary antibodies overnight at 4°C. Next day slide s were stained with EnVision+ System–HRP labeled Polymer (Dako) and visualized with DAB peroxidase substrate kit (Vector Laboratories). IHC scoring was performed as described previously (Klein et al., 2001 (link)). Samples with scores more than 4 were considered as “high” expression group.
For frozen sections, fixation of the tissue sections was performed using 4% PFA. Samples were permeabilized with 0.2% Triton-X, blocked with serum-free protein block solution (Dako) and incubated with corresponding primary antibodies overnight at 4°C. Next slides were incubated with Alexa Flour-conjugated secondary antibody for 1 hr at room temperature and mounted in Vectashield mounting medium containing DAPI (Vector Laboratories). Images were captured with Nikon A1 Confocal microscope (Nikon).
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2

Comprehensive IHC Profiling of Tumor Samples

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For all staining, tissues were routinely processed, and antigen retrieval was performed using citrate buffer (pH = 6) or Tris EDTA buffer (pH = 9), using the Decloaking Chamber from Biocare. After exhaustion of endogenous peroxidase with hydrogen peroxide, slides were blocked with Protein Block Solution (Dako) for 10 min at room temperature and incubated with primary antibody overnight at 4 °C. Primary antibodies were as follows: CD3 (Abcam, Ab16669, 1:800), CD4 (eBioscience, 14-9766-80, 1:1000), and CD8 (eBioscience, 14-0195-82, 1:100), CD68 (BIO-RAD, catalog# MCA1957; dilution 1:100), Foxp3 (eBioscience, 13-5773-82 1:50), Ki67 (Biocare, Catalog# CRM325B; dilution 1:100) and TUNEL staining was performed using the ApopTag kit (Millipore, Catalog# S7100) according to the manufacturer’s recommended protocol. Visualization was performed using Envision (Dako) and DAB (Dako). Samples were de-identified, and the percentage of marker-positive cells were evaluated by a breast cancer pathologist.
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Histological Analysis of Mouse Stomach

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Mouse stomachs from wild type, Mist1-Kras, Mist1-Kras-mTmG, and Mist1-mTmG mice were fixed overnight in 4% paraformaldehyde solution (Affymetrix, 19943) and embedded in paraffin. Paraffin sections (5 μm thickness) were de-paraffinized in Histoclear solution (National Diagnostics, Atlanta, Ga) and hydrated, and antigen retrieval was performed in the Target Retrieval solution (Dako North America, Inc.) using a pressure cooker. After incubating paraffin sections in Protein Block solution (Dako North America, Inc., X0909) at room temperature for 1.5 hours, primary antibodies used for immunohistochemistry and immunofluorescence (Supplementary Table) were incubated at 4°C overnight. For immunohistochemistry, the Dako Envision+ System-HRP DAB (Dako North America, Inc.) was used for secondary antibody incubation and DAB development. For immunofluorescence, secondary antibodies conjugated with Cy2, Alexa 488, Cy3, Alexa 555, Alexa 647, Cy5, or Alexa 790 (1:500) were incubated at room temperature for 1 hour. DAPI (1:10,000) was added for nuclear DNA staining in paraffin sections.
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Lung Tissue Immunofluorescence Staining

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Immunofluorescence (IF) was performed on 4% PFA‐fixed lung cryosections (5–10 μm). Samples were permeabilized and blocked with Dako Protein Block Solution containing 0.1% saponin at room temperature for one 1 hour and then incubated with primary antibodies overnight at 4°C. The samples were then incubated with secondary antibodies for 1.5 hours at room temperature. 4′,6‐diamidino‐2‐phenylindole (DAPI) was applied for 10 minutes before mounting. All wash steps were performed with nonsterile PBS. The following antibodies were used for tissue IF: Aquaporin 5, SFTPC, von Willebrand Factor (vWF), CD3, and CD8. Cryosections were also stained with Hematoxylin and Eosin for Ashcroft scoring, Masson's trichrome for the detection of connective tissue, and Picrosirius Red for the detection of collagen. Apoptotic cells were detected with terminal deoxynucleotidyl transferase dUTP nick‐end labeling (TUNEL) assay (Roche Diagnostics, Mannheim, Germany, http://www.roche-applied-science.com).
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Endometrial Tumor Immunohistochemistry Analysis

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Triplicate cores were made of 118 endometrial tumors at our institution from hysterectomy specimens, and tissue microarrays were created. Immunohistochemical analysis DRD2 (1:300, Santa Cruze Biotechnology Inc.) was performed on 4-μmol/L sections of formalin-fixed, paraffin-embedded tissues using standard methodologies in UNC-CH Translational Pathology Laboratory Core. Individual slides were scanned using the Aperio™ ScanScope (Aperio Technologies, Vista, CA), and digital images were analyzed using Aperio™ ImageScope. Non-parametric tests and Cox regression analysis were used to correlate DRD2 expression with clinical outcomes.
The mouse endometrial tumor tissues were formalin-fixed and paraffin-embedded at the Animal Histopathology Core Facility at UNC-CH. Slides (5 μm) were first incubated with protein block solution (Dako) for 1 h and then with the primary antibodies for Ki-67 (1:400), phosphorylated-S6 (1:300), VEGF (1:800) and BCL-2 (1: 1200) for 2 h at room temperature. The slides were then washed and incubated with appropriate secondary antibodies at room temperature for 1 h. Further processing was carried out using ABC-Staining Kits (Vector Labs, Burlingame, CA) and hematoxylin. Immunohistochemistry slides were scanned by Motic (Houston, TX) and scored by ImagePro software (Vista, CA).
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Immunohistochemical Analysis of Mouse Prostate

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Immunohistochemical detection of beta-catenin, and PrKD1 was performed on mouse prostate tissue and transfected and non-transfected cell lines using anti-beta-catenin (Santa Cruz, #SC1496) and anti PKC mu (Santa Cruz, # 693)8. Mouse prostate tissue was fixed in 4% paraformaldehyde. The paraffin-embedded paraformaldehyde-fixed mice tissue was cut at 5 micron thickness. The first slice of staining sections was used for histological confirmation by Hematoxylin and Eosin (H&E) staining. The tissue slides and fixed cells were treated with 0.1% Triton-X-100 for 3 min, followed by blocking nonspecific binding using protein block solution (Dako, #X0909), overnight incubation with primary antibody at 4°C and one hour incubation with fluorescent secondary antibodies AF594 (Life technologies #SA5-10088) or AF488 (life technologies, #A11070) and contra-stained with DAPI for 5 minutes. Goat isotype IgG (Santa Cruz) was used as negative controls. Tissue slides were examined using Olympus Fluoview (FV10i) confocal microscope and cells were analyzed by IN Cell analyzer 2000 cell imaging system (GE Healthcare Life Sciences).
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7

Immunohistochemical Analysis of Ki-67 and AKT

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First, tissue sections were fixed in formalin for 12 h, embedded in paraffin, deparaffinized in xylene, and rehydrated in alcohol. Second, tissue sections were incubated 45 min in a steamer using protein retrieval solution (Dako, Glostrup, Denmark), followed by 3% hydrogen peroxide solution for 10 min and protein block solution (Dako) for 20 min at room temperature. Tissue sections were then incubated overnight with antibodies against Ki-67 (9027T, Cell Signaling Technology, Danvers, MA, USA) and AKT (4691S, Cell Signaling Technology) at 4 °C followed by 30 min with the biotinylated secondary antibody (Vector Laboratories, Burlington, CA, USA), and ABC reagent (Vector Laboratories) for 30 min. Finally, 3,3′-diaminobenzidene (DAB; Dako) was used to visualize the target proteins. Images of stained tissue sections were obtained using a IX73 microscope (Olympus, Tokyo, Japan).
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8

Histological Evaluation of Liver Fibrosis

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To examine hepatic morphology and assess liver fibrosis, H&E staining and Sirius red staining were performed, respectively. Liver specimens were fixed in 10% neutral buffered formalin (Sigma), embedded in paraffin and cut into 4 μm sections. Next, the specimens were deparaffinized, hydrated and stained by standard methods.
For immunohistochemistry, liver sections were deparaffinized, hydrated and incubated in 3% hydrogen peroxide, to block endogenous peroxidase. Antigen retrieval was performed by heating in 10 mM sodium citrate buffer (pH 6.0) for 10 min using microwave. Specimens were blocked in Protein Block solution (Dako) for 30 min at room temperature (RT) followed by incubation with primary antibody at 4 °C overnight. Other sections were also incubated at 4 °C overnight in non-immune sera. Rabbit α-SMA antibody (diluted 1:500; Abcam) was used as a primary antibody and diluted in Protein Diluent (Dako). Polymer-horseradish peroxidase anti-rabbit (Dako) was used as secondary antibody and 3,3′-diaminobenzidine as brown colour was used to visualize the protein.
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9

Immunohistochemical Analysis of Cardiac Tissue

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For immunohistochemistry staining, heart cryosections were fixed with 4% paraformaldehyde, permeabilized and blocked with Protein Block Solution (DAKO, Carpinteria, CA) containing 0.1% saponin (Sigma, St Louis, MO), and then incubated with the following antibodies overnight at 4 °C: mouse anti-alpha sarcomeric actin (1:100, a7811, Sigma), rabbit anti-CD45 (1:100, ab10559, Abcam, Cambridge, United Kingdom), mouse anti-Actin, α-Smooth Muscle antibody (1:100, A5228, Sigma), rabbit anti-Ki67 (1:100, ab15580, Abcam), rabbit anti-CD3 (1:100, ab16669, Abcam) and mouse anti-CD8 alpha (1:100, mca48r, abd Serotec, Raleigh, NC ). FITC- or Texas-Red secondary antibodies (1:100) were obtained from Abcam Company and used for the conjunction with these primary antibodies. For assessment of cell apoptosis, heart cryosections were incubated with TUNEL solution (Roche Diagnostics GmbH, Mannheim, Germany) and counter-stained with DAPI (Life Technology, NY, USA). For assessment of angiogram, heart cryosections were incubated with Lectin (FL-1171, Vector laboratories, Burlingame, CA, USA). Images were taken by an Olympus epi-fluorescence microscopy system.
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10

Cardiac Fibrosis Assessment in Mice

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All animals were killed 8 days after treatment. Mouse hearts were harvested and frozen in Optimal Cutting Temperature (OCT) compound (Tissue-Tek, Torrance, CA, USA). Cryo-sections (5 μm thick) were prepared. Masson’s trichrome staining was performed as per manufacturer’s instructions [HT15 Trichrome Staining (Masson) Kit; Sigma-Aldrich]. Fibrosis area was measured by NIH Image J as previously described 23 (link). For immunofluorescence staining, mouse heart cryosections were fixed with 4% PFA, blocked/permeabilized with Protein Block Solution (DAKO) containing 1% saponin (Sigma-Aldrich), and then stained with anti-α-SA (Sigma-Aldrich) and anti-von Willebrand factor (Abcam) antibodies. FITC or Texas-Red secondary antibodies were obtained from Abcam and used in conjunction with these primary antibodies. Images were taken by a Zeiss (Jena, Germany) confocal microscopy system.
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