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4 protocols using lyso id red detection kit

1

Lysosomal Staining of Photosensitizer Exposure

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Cells were grown in chamber slides and exposed to non-cytotoxic concentrations of PS (0, 5, 10, 20, 40 μg ml−1) for 24h. Lyso-ID® Red Detection Kit (Enzo Life Sciences, Lausen, Switzerland) was used according to the protocol provided by the producer. Ten μM chloroquine was used as the positive control. After staining of cells with dye for 20 min in the dark, cells were rinsed in Assay Buffer and covered with a coverslip. The slides were scanned in the TissueFAXS (Tissuegnostics, Vienna, Austria) and analyzed by TissueQuest software. Medium-treated cells were used for the gating.
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2

Optimized Branched PEI Transfection

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Branched PEI (water-free) with molecular weight of 25 kDa, ampicillin, reduced l-glutathione (GSH), MTT, tryptone, and yeast extracts were purchased from Sigma-Aldrich (St Louis, MO, USA). Lipofectamine 2000 (Lipo) reagent, Roswell Park Memorial Institute (RPMI) 1640 medium, fetal bovine serum (FBS), penicillin, streptomycin, DNase I, trypsin, and N,N′-cystamine bisacrylamide (CBA) were purchased from Thermo Fisher Scientific (Waltham, MA, USA). A TianPure Midi Plasmid Kit was purchased from Tiangen Biotech Co Ltd (Beijing, China). Hoechst 33342 and DiO were purchased from Beyotime Institute of Biotechnology (Haimen, China). pSilencer 4.1-CMV FANCF shRNA was kindly provided by the Department of Pharmacology of China Medical University (Shenyang, China). A Lyso ID red detection kit and Total Nuclear ID green/red nucleolar/nuclear detection kit were purchased from Enzo Life Sciences (Farmingdale, NY, USA). FANCF antibody (D2) and goat antimouse IgG fluorescein isothiocyanate were purchased from Santa Cruz Biotechnology Inc (Dallas, TX, USA). Agmatine (Agm) sulfate and l-arginine (Arg) were purchased from Sinopharm Chemical Reagent (Shanghai, China). Acetone, N,N-dimethylformamide, and other common reagents were analytical grade.
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3

Autophagy Induction by Ochratoxin A

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Autophagy induction was investigated by examining LC3B-I to LC3B-II conversion by Western blotting and visualizing LC3B puncta formation in stable HK-2 cells expressing GFP-LC3 fusion protein. Stable GFP-LC3 expressing HK-2 cells were treated with 10 µM OTA for 1, 3, 6, 12, and 24 h. As vehicle control, cells were treated with 0.1% v/v Et-OH for 24 h. In order to detect acidic vesicles, Lyso-ID Red Detection Kit (Enzo Life Sciences, Farmingdale, NY, USA) was used as recommended by the manufacturer. Briefly, cells were stained with detection solution; red detection dye for the acidic vesicles, and Hoechst to stain the nuclei. Stained cells were visualized with Leica TCS SP8 confocal microscope (Wetzlar, Germany).
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4

Autophagy and Lysosome Imaging in iNPCs

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The iNPCs were seeded on 18-mm cover-glass bottom dishes and untreated or treated with 500 ng/mL rapamycin for overnight. After the treatments, the cells were stained with a CYTO-ID® autophagy detection kit (Enzo, Farmingdale, NY, USA) and LYSO-ID® Red detection kit (ENZ-51005-0100, Enzo) according to the manufacturer’s instructions. Images were acquired by an Axio VertA.1 microscope (Carl Zeiss).
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