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Irdye tagged secondary antibodies

Manufactured by Thermo Fisher Scientific
Sourced in United States

IRDye-tagged secondary antibodies are fluorescently labeled antibodies used for the detection and quantification of target proteins in various applications, such as Western blotting and immunofluorescence. These antibodies bind to the primary antibody that is specific to the protein of interest, allowing for the visualization and analysis of the target protein.

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6 protocols using irdye tagged secondary antibodies

1

Mitochondrial Imaging in Activated Cells

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Fetal bovine serum (FBS), RPMI, L-glutamine, penicillin, streptomycin, MitoTracker Red, MitoSOX Red stains, IRDye-tagged secondary antibodies, Hoechst nuclear stain, and other cell culture reagents were purchased from Invitrogen (Gaithersburg, MD). LPS (Escherichia coli 0111: B4, endotoxin content 6.6000000 EU/mg) and the Bradford protein assay kit were ordered from MilliporeSigma (Burlington, MA). The p300/H3K27ac inhibitor GNE-049 was purchased from MedChemExpress (Monmouth Junction, NJ). p300 siRNA was purchased from MilliporeSigma (Burlington, MA) for transfection (Cat. #EMU078861-50UG). The phalloidin antibody was purchased from Thermo Fisher Scientific, acetylation inhibitor cocktail from Santa Cruz, and protease and phosphatase inhibitor cocktail from Life Technologies.
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2

In Vitro Neurotoxicity Assay

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1-Methyl-4-phenylpyridinium (MPP+ iodide) and 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP-HCl) were purchased from Sigma (St. Louis, MO, USA). RPMI, neurobasal medium, B27 supplement, fetal bovine serum (FBS), L-glutamine, IR-dye-tagged secondary antibodies, penicillin, and streptomycin and other cell culture reagents were purchased from Invitrogen (Gaithersburg, MD).
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3

MPTP-Induced Neuroinflammation Assay

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DMEM, MEM media, fetal bovine serum (FBS), l-glutamine, IR-dye tagged secondary antibodies, penicillin, streptomycin, and other cell culture reagents were purchased from Invitrogen (Gaithersburg, MD). Recombinant GPNMB (> 90% purity), was purchased from R&D Systems (Cat #: 255-AC-050). The primary mouse monoclonal antibody for inducible nitric oxide synthase (iNOS) (Cat #: sc-7271) and the mouse monoclonal arginase-1 (Cat #: sc-271430) antibody was ordered from Santa Cruz Biotechnology Inc. (Santa Cruz, CA). The chicken polyclonal glial firbrillary acidic protein (GFAP) antibody (Cat. #: ab4674) was obtained from Abcam (Cambridge, MA). The rabbit polyclonal GPNMB (Cat. #: bs-2684r) and rabbit polyclonal CD44 antibody (Cat. #: bs-0521r) was purchased from Bioss (Woburn, MA). 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) and all other reagents were obtained from Sigma-Aldrich (St. Louis, MO), unless otherwise indicated.
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4

Molecular Signaling Pathway Analysis in Cell Cultures

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Dulbecco's modified Eagle’s medium (DMEM), MEM media, fetal bovine serum (FBS), L-glutamine, IRDye-tagged secondary antibodies, Hoechst nuclear stain, penicillin, streptomycin, and other cell culture reagents were purchased from Invitrogen (Gaithersburg, MD). Recombinant PK2 was purchased from PeproTech (Rocky Hill, NJ). The primary antibodies for PKR1, PKR2, Nrf2 were ordered from Santa Cruz Biotechnology Inc. (Santa Cruz, CA). GFAP antibody was obtained from Millipore (Billerica, MA). We purchased the phosphorylated STAT6 and native STAT6 antibodies from Cell Signaling (Danvers, MA). The Arginase-1 antibody was ordered from Thermo Fisher (Waltham, MA). The GLAST antibody was generously provided by Dr. Yongjie Yang, Tufts University. Bradford protein assay kit was purchased from Bio-Rad Laboratories (Hercules, CA). Fluo-4 calcium assay and CyQUANT® kits were ordered through Invitrogen.
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5

Investigating Cellular Stress Response Pathways

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Modified Eagle’s medium (MEM), fetal bovine serum (FBS), L-glutamine, MitoSOX for reactive oxygen species (ROS) assay, IRDye-tagged secondary antibodies, Hoechst nuclear stain, penicillin, streptomycin, and other cell culture reagents were purchased from Invitrogen (Carlsbad, CA, USA). ATF-4, p-IRE1α, p-eIF2α, PKCδ, and p-PKCδ Y311 antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA). A comprehensive list of the antibodies used in this study has been provided in Supplementary Table 1. NLRP3, ASC, and caspase-1 antibodies were purchased from AdipoGen (San Diego, CA, USA). The TrX and TXNIP antibody purchased from the Abcam (Cambridge MA). The β-actin antibody was purchased from Sigma-Aldrich (St. Louis, MO, USA). Mito-apocynin (MitoApo) was obtained from Dr. Kalyanaraman (Medical College of Wisconsin, Milwaukee, WI, USA). Protein A/G magnetic beads were purchased from Thermo Fisher Scientific (Waltham, MA). The CD11b magnetic separation kit was purchased from Stem Cell Technologies (Vancouver, Canada). The Duo-link proximity ligation assay reagents were purchased from Sigma Aldrich (St. Louis, MO). The Bradford protein assay was purchased from Bio-Rad Laboratories (Hercules, CA). The quick western kit was purchased from the LICOR (Lincoln, NE, USA).
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6

Neuroinflammatory Signaling in Parkinson's Disease

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Recombinant TWEAK was obtained from PeproTech. Modified Eagle’s medium (MEM), fetal bovine serum (FBS), L-glutamine, MitoSox, DCFDA-H2 kit for ROS assay, IRDye-tagged secondary antibodies, Hoechst nuclear stain, penicillin, streptomycin and other cell culture reagents were purchased from Invitrogen (Carlsbad, CA, USA). ELISA kits for IL-1β, IL-18, TNF-α and TWEAK were purchased from RayBiotech (Peachtree Corners, GA, USA). Rabbit anti-NLRC4, PKCδ, pPKCδ-Y311, STAT3 and pSTAT3 antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA). ASC and caspase-1 antibodies were purchased from AdipoGen (San Diego, CA, USA). GFAP antibody was purchased from EMD Millipore (Burlington, MA, USA). Aurintricarboxylic acid (ATA), 1-methyl-4-phenylpyridinium (MPP+ iodide), MPTP-HCl, and β-actin antibody were purchased from Sigma-Aldrich (St. Louis, MO, USA). Mito-apocynin was obtained from Dr. Kalyanaraman (Medical College of Wisconsin, Milwaukee, WI, USA). MitoTracker Red CMXRos was purchased from Molecular Probes (Eugene, OR, USA). Luminex multiplex cytokine (Multiplex mouse cytokine panel) assay kit was purchased from Bio-Rad Laboratories (Hercules, CA, USA). The CD11b magnetic separation kit was purchased from Stem Cell Technologies (Vancouver, Canada). The Bradford protein assay and TidyBlot detection reagents were purchased from Bio-Rad Laboratories.
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