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Adenosine

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Adenosine is a nucleoside that is composed of the nucleic acid adenine attached to a ribose sugar molecule. It is a naturally occurring compound found in all living cells and plays a crucial role in various cellular processes, including energy metabolism and cell signaling.

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12 protocols using adenosine

1

Cell Viability Assay Reagents

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Dimethylsulfoxide (DMSO), L-glutamine, adenosine, gentamicin, adenosine, HEPES, hemin and Amphotericin B, were bought from Gibco (Gibco, Life Technologies GmbH, Karlsruhe, Germany) and Sigma (Darmstadt, Germany). 3-(4,5 dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) was obtained from Sigma-Aldrich (Deisenhofen, Germany). Schneider’s Drosophila medium, M199 medium, Dulbecco’s modified Eagle’s medium (DMEM) phenol red-free, RPMI-1640, Fetal Calf Sera (FCS) were supplied from Gibco (Gibco, Invitrogen Corporation, Carlsbad, CA).
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2

Artificial Cerebrospinal Fluid Preparation

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Artificial cerebral spinal fluid (aCSF) containing 126mM NaCl, 2.5 mM KCl, 1.2 mM NaH2PO4, 2.4 mM CaCl2·2H2O, 1.2 mM MgCl2·6H2O, 25mM NaHCO3, 11 mM glucose, and 15 mM Tris(hydroxymethyl) aminomethane was freshly made and adjusted to pH 7.4 before brain slice experiments. All the salts were purchased from Sigma-Aldrich. Adenosine (Acros organics, Morris Plains, NJ, USA) was dissolved in 0.1 M HClO4 for 10 mM Adenosine stock solution. A 1 μM Adenosine solution was freshly made before flow cell experiment and post calibration by diluting the stock solution.
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3

Adenosine Signaling Modulators in Rodent Studies

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All components of the phosphate-buffered saline (PBS) solution (in mM: 3.0 KCl, 10.0 NaH2PO4, 2.0 Na2SO4, 1.2 MgCl2, 131. 25 NaCl and 1.2 CaCl2, with pH adjust to 7.4 using concentrated HCl or NaOH) were purchased from Fisher Scientific (Fair Lawn, NJ, USA) and PBS was used for electrode calibration. A 10.0 mM stock solution of adenosine (Fisher Scientific, Fair Lawn, NJ, USA) was prepared in 0.1 M HClO4 once a month and stored at 4°C. 1.0 μM adenosine solution for electrode calibration was prepared daily in PBS buffer. All drugs were administered intraperitoneally (i.p). Caffeine (100 mg/kg, Sigma Aldrich, St. Louis, MO, USA) was dissolved in 1 mL warm saline. SCH 442416 (3 mg/kg; Tocirs, Bristol, UK) was dissolved in 300 μL dimethyl sulfoxide (DMSO; Amresco, Solon, OH, USA). Doses were selected based on previous experiments in the literature.12 (link),59 (link)
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4

Perfusion-Based Tissue Harvesting

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At 7 days after FAL, mice were anesthetized (i.p., 120 mg/kg ketamine, 12 mg/kg xylazine, and 0.08 mg/kg atropine) and euthanized via an overdose of pentobarbital sodium and phenytoin sodium (Euthasol, Virbac, Fort Worth, TX). The left ventricle was cannulated with a 23G catheter (right ventricle was carefully opened to act as a sink for perfusate), and the entire body was perfused with 7 mL Tris-CaCl2 (0.1 g/L CaCl2) containing 2% heparin, 2 mmol/L adenosine (16404, Fisher Scientific, Pittsburgh, PA), and 0.1 mmol/L papaverine (P3510, Sigma-Aldrich, St. Louis, MO) to clear and vasodilate the downstream vasculature at a constant rate of 1.5 mL/min (PHD2000, Harvard Apparatus). Once perfused, we waited 5 min to enable vasodilation. The entire body was then perfused with 14 mL Tris-CaCl2, and both gracilis muscles were dissected free, placed in RNAlater (Ambion), and stored at −20°C.
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5

Perfusion and Tissue Harvesting

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Seven days after FAL, mice were anesthetized (i.p. 120 mg/kg ketamine, 12 mg/kg xylazine, and 0.08 mg/kg atropine) and euthanized via an overdose of pentobarbital sodium and phenytoin sodium (Euthasol®, Virbac, Fort Worth, TX, USA). The left ventricle was cannulated with a 23-G catheter (right ventricle was carefully opened to act as a sink for perfusate), and the entire body was perfused with 7 mL of Tris–CaCl2 (0.1 g/L CaCl2) containing 2% heparin, 2 mmol/L adenosine (16404, Fisher Scientific, Pittsburg, PA, USA), and 0.1 mmol/L papaverine (P3510, Sigma-Aldrich, St. Louis, MO, USA) to clear and vasodilate the downstream vasculature at a constant rate of 1.5 mL/min (PHD2000, Harvard Apparatus). Once perfused, we waited 5 min to enable vasodilation. The entire body was then perfused with 14 mL Tris–CaCl2. Both gracilis and gastrocnemius muscles, as well as the liver, spleen, and kidneys were dissected free, placed in RNAlater (Ambion), and stored at −20°C.
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6

In Vitro Electrochemical Sensing Setup

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Adenosine, dopamine, histamine, and Adenosine triphosphate (ATP) were purchased from Acros Organics (Morris Plains, NJ), and H2O2 was purchased from Macron (Center Valley, PA). Stock solutions were prepared in 0.1 M HClO4 to 10 mM concentration. The final working solutions were prepared by diluting the stock solution in the phosphate-buffered saline (PBS) containing 131.25 mM NaCl, 3.00 mM KCl, 10.0 mM NaH2PO4, 1.2 mM MgCl2, 2.0 mM Na2SO4, and 1.2 mM CaCl2 with pH adjusted to 7.4. The buffer was also adjusted to pH 7.3 by HCl or pH 7.5 by NaOH to test the effect of pH change. In vitro experiments and electrode calibration were conducted with a flow cell connected to a syringe pump (Harvard Apparatus, Holliston, MA) and a six-port loop injector with an air actuator (VIVI Valco Instruments, Houston, TX).
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7

Electrochemical Sensor Fabrication Protocol

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Platinum wire (50 μm diameter) and glass capillary tubes were
obtained from A-M Systems (Sequim, WA, USA). Polyimide capillaries with inner
diameter of 100 μm were obtained from Polymicro Technologies (Lisle, IL,
USA). Silver conducting epoxy was obtained from MG Chemicals (Ontario, Canada)
and 5-minute epoxy was obtained from Devcon (OH, USA). Glutamate oxidase
(GlutOx) (EC 1.4.3.11, 25 U/vial; from E. coli) was obtained
from Cosmo Bio USA, Inc. (Carlsbad, California, USA). Ascorbate oxidase (AsOx)
was obtained from Alfa Aesar (Haverhill, MA USA). Silver wire, acetic acid,
L-ascorbic acid, uric acid, adenosine, dopamine, and
serotonin hydrochloride were obtained from Acros Organics (NJ, USA). Chitosan
from shrimp shells, o-phenylenediamine, albumin from bovine serum,
L-glutamic acid, and D-glucose anhydrous
were obtained from Sigma-Aldrich (St. Louis, MO, USA). Isothesia was obtained
from Henry Schein. Sulfuric acid was obtained from Fisher Scientific (Fair Lawn,
NJ, USA).
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8

Rat Alveolar Macrophage Activation Assay

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Adenosine (purity > 99%) was purchased from Acros Organics (Waltham, MA). Bovine serum albumin, fraction V, heat shock isolated was purchased from Spectrum Chemical Mfg. Corp (New Brunswick, NJ). Lipopolysaccharide (LPS) from Escherichia coli was purchased from Novus Biologicals (Centennial, CO). Fetal bovine serum and rat alveolar macrophages, NR8383 [AgC11x3A, NR8383.1] (ATCC CRL-2192), were purchased from ATCC (Manassas, VA). Penicillin–streptomycin, l-glutamine, Dulbecco’s phosphate-buffered saline (DPBS), ACK lysis buffer, Nigericin sodium salt, and endotoxin-free sterile water and HPLC grade methanol were purchased from Thermo Fisher Scientific (Waltham, MA). Antimouse IL-6 (MP5-20F3) APC antibody was purchased from BioLegend (San Diego, CA). RPMI medium was purchased from Life Technologies (Gaithersburg, MD). Rat IL-1β uncoated enzyme-linked immune assay (ELISA) was purchased from R&D Systems (Minneapolis, MN). Mouse TNFα uncoated ELISA kit, antimouse CD16/CD32 and antimouse CD86 (B7-1) PE antibodies, and buffers used in flow cytometric analyses were purchased from Invitrogen (Waltham, MA).
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9

Adenosine Receptor Modulation of PEK Assay

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Adenosine was purchased from Acros Organics (New Jersey, US). A1 (DPCPX), A2A (ZM241385, A2B (MRS1754), and A3 (MRS1220) receptor antagonists were purchased from Tocris Bioscience (Minneapolis, MN). The final concentration of Adenosine used in the PEK assay was 300nM. The Adenosine receptor antagonists were diluted to concentrations that would allow for specific receptor antagonism with minimal crossover to other receptors based on previous publication (14 (link)). The following concentrations were used: A1 (10nM), A2A (30nM), A2B (10nM), A3 (10nM). These agents were used in a slightly modified PEK assay. During the ice incubation of the opsonized bacteria the thioglycollate elicited macrophages or neutrophils were incubated with Adenosine for 15 minutes in a 37°C shaker and then the PEK assay continued as described above. For the experiments utilizing Adenosine and Adenosine receptor antagonists the cells were first exposed to the antagonists for 15 minutes in the 37°C shaker and then the Adenosine was added and the cells were kept in the shaker for an additional 15 minutes.
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10

Adenosine Receptor Pharmacology in Brain Slices

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All chemical reagents were purchased from
Sigma-Aldrich. The aCSF buffer was composed of 126 mM NaCl, 2.5 mM
KCl, 1.2 mM NaH2PO4, 2.4 mM CaCl2·2H2O, 1.2 mM MgCl2·6H2O, 25 mM NaHCO3, 11 mM glucose, and 15 mM tris(hydroxymethyl)
aminomethane dissolved in deionized water (Milli-Q Biocel; Millipore,
USA). The aCSF was freshly prepared before the experiments and adjusted
to pH 7.4 for brain slice experiments. Adenosine and inosine were
purchased from Acros Organics (Morris Plains, NJ, USA). Stock solutions
(10 mM) were prepared in 0.1 M perchloric acid and diluted to a 1
mM concentration with aCSF.
DPCPX (A1 Adenosine receptor
antagonist) and MRS 1220 (A3 Adenosine receptor antagonist)
were purchased from Tocris Bioscience (Minneapolis, USA). A 10 μM
amount of DPCPX and 5 μM of MRS 1220 were freshly prepared by
dissolving in 1 mL of dimethyl sulfoxide (DMSO) through sonication
and diluted with an aCSF buffer.
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