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Centrifuge 5425 5425 r

Manufactured by Eppendorf
Sourced in Germany

The Eppendorf Centrifuge 5425/5425 R is a high-performance desktop centrifuge designed for a variety of laboratory applications. It offers fast acceleration and deceleration, and can accommodate a range of rotor types and tube sizes.

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6 protocols using centrifuge 5425 5425 r

1

Superoxide and Hydrogen Peroxide Assays

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A 0.5 g of leaves were homogenized in 6 mL of phosphate buffer (65 mM, pH 7.8) and then centrifuged at 10,000 rpm (Centrifuge 5425/5425 R; Eppendorf, Germany) at 4 °C for 10 min. Next, 1 mL of supernatant, 0.9 mL of phosphate buffer (65 mM, pH 7.8), and 0.1 mL of hydroxylamine hydrochloride (10 mM) were mixed, and the solutions were placed in a water bath for 20 min at 25 °C. To 0.5 mL of those solutions, 0.5 mL of sulfanilic acid (17 mM) and 0.5 mL of α-naphthylamine (17 mM) were added, followed by 20 min of incubation at 25 °C in a water bath. O2•− production rate was determined following the addition of N-butyl alcohol and read at 530 nm, which was expressed as μM min−1 g−1 FW [54 (link)]. A 0.5 g of leaves was homogenized in 5 mL of ice-cold trichloroacetic acid (0.1%, w/v) and centrifuged at 12,000 rpm (Centrifuge 5425/5425 R; Eppendorf, Germany) at 4 °C for 15 min to collect the supernatant, then optical absorption of the supernatant was measured spectrophotometrically at 410 nm to measure H2O2 content and expressed as μM g−1 FW [55 (link)].
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2

Photosynthetic Leaf Pigment and Gas Exchange

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A 0.1 g of leaves were digested in 5 mL alcohol (95%, v/v) overnight at 4 °C, and then centrifuged at 12,000 rpm (Centrifuge 5425/5425 R; Eppendorf, Germany) for 5 min at 4 °C. The supernatant was stored at 4 °C for Chl a, Chl b, Chl a+b, and Chl a/b ratio measurements [46 (link)]. Leaf photosynthetic parameters were measured between 10:30 and 11:30 AM using an LI-6400 XT portable photosynthesis system (LI-COR Inc., Lincoln, NE, USA). The Pn, Ci, Gs, and Tr were measured in a chamber at 1,500 μM m−2 s−1 photosynthetically active radiation (PAR) and 380 ± 5 μM CO2 M−1 [15 ]. The WUE and Rubisco activity [47 (link)] were estimated as follows:

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3

Leaf Conductivity and Lipid Peroxidation Assay

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A 0.1 g of leaves was placed in test tubes containing 10 mL of double–distilled water and incubated at 40 °C for 30 min. The conductivity (C1) was measured using a DDSJ-308F conductivity meter (Rex Electric Chemical, China). The same set was then kept in a water bath at 100 °C for 15 min, and the conductivity was recorded (C2). The MSI [20 (link)] was calculated as follows:
The lipid peroxidation was measured by MDA content [53 (link)]. Briefly, a 0.5 g of leaves was homogenized in 5 mL of 0.3% thiobarbituric acid (TBA) and 10% (v/v) trichloroacetic acid. After incubation at 100 °C for 30 min, mixtures were centrifuged at 12,000 rpm (Centrifuge 5425/5425 R; Eppendorf, Germany) for 10 min. The absorbance of the colored supernatant was measured at 450 nm, 532 nm, and 600 nm, respectively. Then MDA concentration was calculated and its content was expressed as µM g−1 fresh weight (FW).
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4

Quantitative DIMBOA Analysis by HPLC

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The DIMBOA content was determined using high-performance liquid chromatography (HPLC; Shimadzu LCMS8040 system, Beijing, China). Namely, freeze-dried leaves (0.2 g per sample) were homogenized and weighted into screw-capped 10 mL polypropylene centrifuge tubes, and 5 mL of HPLC grade methanol-methanoic acid solution (0.01%, v/v) was added to each tube. The tubes were rotated and placed in the dark for 12 h and then centrifuged at 12,000 rpm (Centrifuge 5425/5425 R; Eppendorf, Hamburg, Germany) for 20 min at 4 °C. Supernatants (600 μL) were slowly passed the corresponding Millex® needle filter and transferred into auto-sample vials for analysis by HPLC. Standard DIMBOA (CAS No.: 15893-52-4) was purchased (Sigma-Aldrich, MA, USA) and was used to optimize the mass spectrometric parameters and fragment spectra.
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5

Polyamine Quantification in Plant Leaves

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A 0.1 g of leaves was homogenized with 1 mL of HClO4 (5%, w/v), kept in an ice bath for 1 h, and then centrifuged at 12,000 rpm (Centrifuge 5425/5425 R; Eppendorf, Germany) for 30 min at 4 °C. The supernatant was stored at –70 °C for PAs concentration measurements by high-performance liquid chromatography (HPLC; Shimadzu LCMS8040 system, China) [11 (link)]. Standard Put (CAS No.: 333–93–7), Spm (CAS No.: 71–44–3), and Spd (CAS No.: 334–50–9) were purchased from Sigma–Aldrich (USA) and were used to optimize the mass spectrometric parameters and fragment spectra [12 (link),13 (link),14 (link)].
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6

Proline Content Quantification in Leaves

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A 0.5 g of leaves was homogenized in 10 mL of 3% ice-cold sulfosalicylic acid and then centrifuged at 12,000 rpm (Centrifuge 5425/5425 R; Eppendorf, Germany) at 4 °C for 15 min. The supernatant, 2 mL, was mixed with 2 mL of acid ninhydrin and 2 mL of glacial acetic acid. After incubation at 100 °C for 1 h, 4 mL of toluene was added to extract the red substance. After standing for 30 min, the toluene layer was collected and its absorbance was measured at 520 nm. The Pro content was calculated and expressed as μg g−1 FW [21 (link)].
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