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Transscript one step gdna removal and cdna synthesis supermix kit

Manufactured by Takara Bio
Sourced in China

The TransScript One-Step gDNA Removal and cDNA Synthesis SuperMix kit is a reagent designed for the simultaneous removal of genomic DNA and synthesis of complementary DNA (cDNA) from RNA samples in a single reaction. The kit includes components necessary for both processes.

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3 protocols using transscript one step gdna removal and cdna synthesis supermix kit

1

Validation of Anthocyanin Biosynthesis Genes

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For validating gene expression using qRT-PCR, 32 unigenes associated with anthocyanin biosynthesis and phytohormone metabolism were randomly selected (Supplementary Table 2). Total RNA isolation was conducted by using the RNAprep Pure Plant Kit (Tiangen, Beijing, China). First-strand cDNA was synthesized with TransScript One-Step gDNA Removal and cDNA Synthesis SuperMix kit (Takara, Dalian, China), and the extracted RNA was used as template according to manufacturer’s instructions. A list of gene-specific primers is provided in Supplementary Table 1. The quantified expression levels of the tested genes were normalized against the house keeping genes TIP41-like protein (TIP41) according to previous study on L. aurea (Ma et al., 2016 (link)). qRT-PCR assays were conducted by the SYBR Premix Ex Taq™ II kit (Tli RNaseH Plus) (Takara, Dalian, China) in a Bio-Rad iQ5 Gradient RT-PCR system. Reaction conditions were: 30 s of denaturation at 95°C and 40 amplification cycles (5 s at 95°C, 30 s at 60°C). Calculation of relative target gene expression levels was done using the 2–ΔΔCt method (Livak and Schmittgen, 2001 (link)). Experiments were conducted using three independent biological and three technical replicates.
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2

Transcriptional Analysis of Antibiotic Response

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One colony of each sample was inoculated in 2 ml of the TSB medium and incubated at 37°C overnight. The overnight culture was diluted to OD600 = 0.05 and grown with constant aeration at 37°C until being treated with antibiotics at the mid-log phase of growth (OD600 = 0.6). After incubating for an additional 15 min, the cells were harvested by centrifugation at 4°C. Total RNA extraction was performed using a TaKaRa MiniBEST Universal RNA Extraction kit (Takara, Dalian, China). The cDNA was subsequently synthesized by a TransScript One-Step gDNA Removal and cDNA Synthesis SuperMix kit (Takara, Dalian, China). SYBR Premix Ex Taq II (Takara, Dalian, China) was used for real-time polymerase chain reaction (RT-PCR) analyzes. The primers used for RT-PCR are listed in Supplementary Table S2. Each sample was analyzed in triplicate.
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3

Quantifying RNA Expression in Dular Mutants

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Total RNA extracted from leaves of Dular-WT and Dular-OE, treated at normal or low temperatures for 48 h, was reversed transcribed into cDNA using the TransScript One-Step gDNA Removal and cDNA Synthesis SuperMix kit (Takara bio, Kusatsu, Shiga, Japan). The qPCR was carried out using the TransStart Tip Green qPCR Supermix kit (Bio-Rad, Hercules, CA, USA) and the Eppendorf Realplex4 (Eppendorf, HAM, DE) instrument. The qRT-PCR conditions were as follows: predenaturation at 94 °C for 30 s, denaturation at 94 °C for 5 s, annealing at 55 °C for 15 s, and extension at 72 °C for 10 s (42 cycles). The relative expression of each candidate mRNA in different samples was calculated by the 2ΔΔCt method. The qPCR primers are listed in Table S7.
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