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4 protocols using mouse anti actin

1

Evaluating Anti-Cancer Drug Effects

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All cell lines used in this study were purchased from ATCC and cultured as following: A549 cells with F‐12K medium (Gibco) containing 10% FBS (Gibco) and 1% penicillin/streptomycin (Sangon Biotech), H1299, H1975 and H1650 with RPMI‐1640 medium (Gibco) containing 10% FBS and 1% penicillin/streptomycin, 16HBE cells with DMEM (Gibco) medium containing 10% FBS and 1% penicillin/streptomycin. Cell transfection with plasmids or siRNAs was carried out as previously described.17 The antibodies used for Western blot were as follows: mouse anti‐CRKL (1:1000; Santa Cruz); mouse anti‐Flag tag (abbreviation for Fg; 1:5000; Sigma); rabbit anti‐GLI2 (1:1000; ABclonal); and mouse anti‐ACTIN (1:5000; Genscript). The siRNAs sequences were shown as follows: MOCK‐siRNA, 5′‐CAA ACA CUU CCU UGG AAU GdTdT‐3′; CRKL‐siRNA‐1, 5′‐GCU CUG CUC UAC CAU GUU UdTdT‐3′; CRKL‐siRNA‐2, 5′‐CGT GAA AGU CAC AAG GAU GdTdT‐3′; GLI2‐siRNA‐1, 5′‐GUU CCU CAC GGC GUC GUA GdTdT‐3′; GLI2‐siRNA‐2, 5′‐CAA GAC CGA GCC UGA GGG CdTdT‐3′. For chemical treatment, cells were seeded into 96‐well plate at 1 × 104/well. After 24 hours, cells were treated with 5 μg/mL adriamycin (Sigma), 20 μg/mL 5‐FU (Sigma), 10 μg/mL cisplatin (Sigma), 20 μmol/L cyclopamine (MedChemExpress), 10 μmol/L gefitinib (MedChemExpress) or 10 μmol/L GANT61 (MedChemExpress) for additional 24 hours.
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2

Protein Extraction and Western Blotting

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Lysis buffer (50 mM Tris-HCl [pH 7.5], 150 mM NaCl, 1 mM EDTA, 10% glycerol, 13 protease inhibitor cocktail, 1 mM PMSF, 0.1% NP-40, 5% b-mercaptoethanol) was used for tissue total protein extraction. Lysis buffer (100 ml) was added to the ground tissue and incubated on ice for 10 min, followed by centrifugation at 13 000 g for 10 min. An appropriate volume of supernatant was taken, and a BCA protein assay kit was used to detect protein concentration. SDS loading buffer (10 ml, 63) (300 mM Tris-HCl [pH 6.8], 60% glycerol, 12% SDS, 0.006% bromophenol blue) was added to 50 ml of supernatant, then incubated at 99 C for 10 min. Proteins were separated by SDS-PAGE (4% stacking gel and 10% separated gel) and transferred to nitrocellulose membrane for western blotting. The primary antibodies included mouse anti-HA (Abcam), mouse antiactin (GenScript), mouse anti-GFP (GenScript), and rabbit anti-ZmMM1 (ABclonal); goat anti-mouse and goat anti-rabbit immunoglobulin secondary antibodies were obtained from Sangon.
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3

Ubiquitination Analysis of GLI Transcription Factors

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Cells were transfected using lipofectamine 2000 according to the manufacturer's instructions. Forty‐eight hours after transfection, cells were harvested for immunoprecipitation and western blot analysis with standard protocols. To examine the ubiquitination levels of GLI2 and GLI3, A549 cells were transfected with Myc‐GLI2, HA‐GLI3 and different SPOP mutants. Before cell harvesting, the cells were treated by MG132 (50 mmol/L/mL) for 4 hours to prevent protein destabilization. Cells were first lysed by 100 mL denaturing buffer (1% SDS, 50 mM Tris, pH 7.5, 0.5 mmol/L EDTA and 1 mmol/L DTT) and incubated at 100°C for 5 minutes. The lysates were diluted with 900 mL lysis buffer and subjected to immunoprecipitation and western blot. The antibodies used for western blot analyses were as follows: mouse anti‐Fg (Sigma, Darmstadt, Germany); mouse anti‐ACTIN (Genscript, Corporation, Piscataway, NJ, USA); rabbit anti‐GLI1 (ABclonal, Woburn, MA, USA); rabbit anti‐PTCH1 (ABclonal); rabbit anti‐BCL2 (ABclonal); rabbit anti‐HHIP (ABclonal); rabbit anti‐AXIN2 (ABclonal); rabbit anti‐c‐Myc (ABclonal); rabbit anti‐CTGF (ABclonal); rabbit anti‐AREG (ABclonal); rabbit anti‐SPOP (ABclonal); mouse anti‐Myc (Santa Cruz Biotechnology, Santa Cruz, CA, USA); mouse anti‐HA (Santa Cruz); mouse anti‐Ub (Santa Cruz); goat antimouse HRP (Abmax) and goat anti‐rabbit HRP (Abmax, Beijing, China).
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4

Co-Immunoprecipitation and Immunoblotting Assay

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All cell-based assays in this study were carried out in 293T cells. 293T cells were cultured in Dulbecco’s modified Eagle’s medium (Gibco) supplemented with 10% fetal bovine serum (FBS, Gibco) and 1% penicillin/streptomycin (Sangon Biotech). Construct transfection was performed using PEI (Sigma) according to the manufacturer’s instructions [54 (link)]. Two days after transfection, cells were harvested to extract total protein for following co-IP and immunoblot (IB) according to our previous protocols [55 (link)]. The following antibodies were used for IP and IB: mouse anti-Flag (1:500 for IP, 1:5000 for IB, Sigma); mouse anti-Myc (1:200 for IP, 1:2000 for IB, Santa Cruz); mouse anti-HA (1:200 for IB); mouse anti-Actin (1:5000, Genscript); rabbit anti-Ub-K63 (1:1000 for IB, ABclonal); rabbit anti-Ub-K48 (1:1000 for IB, ABclonal); goat anti-mouse HRP (1:10000, Abmax) and goat anti-rabbit HRP (1:10,000, Abmax). The densities of IB bands were measured by Image J software.
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