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Jsm 1400 electron microscope

Manufactured by JEOL
Sourced in United States

The JSM 1400 is a scanning electron microscope (SEM) manufactured by JEOL. It is designed to produce high-resolution images of samples by scanning the surface with a focused beam of electrons. The JSM 1400 can magnify specimens up to 100,000 times, allowing for detailed analysis of microstructures and surface features.

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4 protocols using jsm 1400 electron microscope

1

Ultrastructural Analysis of Cells

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Cells were fixed by immersion in 2.5% glutaraldehyde (Sigma–Aldrich), 4% paraformaldehyde (Sigma–Aldrich), 0.02% picric acid (Sigma–Aldrich) in 0.1 M sodium cacodylate buffer (pH 7.3) and fixation was continued overnight at 4°C. Cells were washed and post-fixed with 1% Osmium tetroxide (Sigma–Aldrich) and 1.5% Potassium ferricyanide (III) (Sigma–Aldrich) aqueous solution for 60 min. After washing, cells were stained with 1.5% aqueous Uranyl acetate (Sigma–Aldrich) solution for 30 min and then dehydrated through graded ethanol series, followed by acetonitrile (15 minutes per step). Samples were then embedded in Embed 812 resin (Electron Microscopy Sciences) and sections were cut at 55–60 nm (silver-gold) using a Diatome diamond knife (Diatome) on a Leica Ultracut S ultramicrotome (Leica). Sections were then contrasted with lead citrate and viewed on a JSM 1400 electron microscope (JEOL) operated at 100 kV. Digital images were recorded using a Veleta 2K x2K camera (EMSIS).
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2

Synaptic Vesicle Morphometry in Rab27B KO Mice

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The fixation protocol followed an established procedure (Schikorski & Stevens, 1997). Briefly, anesthetized WT and Rab27B knockout mice were perfused with oxygenated saline followed by 10 min perfusion with 4% glutaraldehyde in 100 mM phosphate buffer, pH 7.2. The brain was removed and fixed overnight in the same fixative. After rinsing, 300 µm‐thick Vibratome slices of the brain, cut through the hippocampus region, were post‐fixed for 1 hr at 4°C in a mixture of 1% OsO4 and 1.5% K+‐ferrocyanide. The slices were rinsed, bisected to make half brains, dehydrated and flat embedded in Epon. Ultrathin sections of the CA1 region where examined after staining with lead citrate and uranyl acetate with a JEOL JSM 1400 electron microscope. Images of synapses were recorded digitally at a print magnification of 68,900× and processed in Adobe Photoshop CS6 (Adobe Photoshop, RRID:SCR_014199). Synaptic vesicle diameters were determined using the Photoshop measurement software. Synaptic vesicles were analyzed in synapses of 2 WT and 2 Rab27B knockout mice. For CA1 a total of 17 WT and 18 KO synapses were analyzed and diameters of 113 WT and 130 Rab27B KO synaptic vesicles were measured. In CA3, 221 WT and 234 Rab27 KO synaptic vesicles were measured from 22 and 17 synapses, respectively.
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3

Ultrastructural Analysis of Mitochondria

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Triplicates of control and TM-treated cells cultured in monolayers in a six-well plate, were fixed with 4% PFA, 2.5% glutaraldehyde, and 0.002% picric acid in 0.1 M sodium cacodylate buffer, pH 7.3 overnight at 4 °C. Samples were washed with buffer and post-fixed in aqueous 1% OsO4, 1.5% potassium ferricyanide for 1 h, washed with buffer. After a wash in deionized water, the samples were en bloc stained with 1.5% uranyl acetate(aqueous) for 1 h in the dark. Samples were dehydrated through a graded ethanol series then infiltrated with epoxy resin (LX112, Ladd Research Industries). Polymerized blocks were trimmed and sectioned at 65 nm. Sections were mounted on 200 mesh, thin-bar copper grids and post-stained with lead citrate. Samples were viewed on a JEOL JSM 1400 electron microscope (JEOL, US, Peabody, MA) and images were captured on a Veleta 2K × 2K CCD camera (EMSIS, GmbH, Muenster, Germany). Quantification of abnormal cristae/mitochondrial area was done using ImageJ software.
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4

Ultrastructural Analysis of Cell Samples

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Cells were fixed with a modified Karnovsky’s fixative, and embedded in an epon analog resin. En face ultrathin sections (65 nm) were contrasted with lead citrate, as previously described66 (link). FFPE tissue punches were reprocessed and embedded in flat molds and processed following the above protocol66 (link).
Transmission electron micrographs were captured using a JSM 1400 electron microscope (JEOL), a Veleta 2K x 2K CCD camera (EMSIS), and the iTEM acquisition software (EMSIS). Images were acquired at a resolution of 4008 × 2672 pixels at 9 micron/pixel and a 14-bit depth. Linear LUT was used at full range. No post-acquisition processing was performed, besides minor adjustments of brightness and contrast, applied equally to all images. At least 10 representative images (8000× field) were analyzed per condition using ImageJ.
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