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18 protocols using pclamp v10

1

Patch-Clamp Recordings of Cortical Neurons

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Whole-cell currents were recorded from cultured rat cortical neurons using a MultiClamp 700B patch-clamp amplifier with Digidata 1440 A controlled by pClamp v10.2 software (Molecular Devices). Recordings were 8-order low-pass filtered at 200 Hz and the acquisition rate was 20000 samples per second. Solution exchange was performed by means of a fast solution application system as described earlier13 (link). Unless otherwise specified, the external bathing solution contained (in mM): 140 NaCl; 2.8 KCl; 1.0 CaCl2; 10 HEPES, at pH 7.2–7.4, osmolarity 310 mOsm. The intrapipette solution contained (in mM): 120 CsF, 10 CsCl, 10 EGTA, and 10 HEPES, osmolarity 300 mOsm14 (link), with pH adjusted to 7.4 with CsOH. Patch pipettes of 2–4 MΩ were pulled from Sutter BF150-89-10 borosilicate capillaries. Experiments were performed at 23–25 °C. Under control conditions, neurons were voltage clamped at −70 mV. Data are reported without corrections for liquid junction potential, which was measured as −11 mV. To activate NMDARs, 100 µM NMDA and 30 µM glycine were co-applied. Some experiments were performed on neurons loaded with BAPTA. To load BAPTA, cortical neuron cultures were incubated in bathing solution containing 10 µM BAPTA-AM for 2 hours.
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2

Nicotine-Evoked Currents in Sensory Neurons

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Conventional whole-cell patch-clamp recordings were used to study nicotine-evoked currents in isolated sensory neurons. Recording was performed with an Axopatch 200B controlled with pClamp (v 10.2) software (Molecular Devices, Carlsbad, CA) in combination with a Digidata 1320A A/D converter (Molecular Devices). Data were acquired at 10 kHz and filtered at 2 kHz. Borosilicate glass (WPI, Sarasota, FL) electrodes were 1–2 MΩ when filled with the electrode solution containing (in mM): K-methanesulfonate 110, KCl 30, NaCl 5, CaCl2 1, MgCl2 2, HEPES 10, EGTA 11, Mg-ATP 2, Li-GTP 1, pH 7.2 (adjusted with Tris-base), 310 mOsm (adjusted with sucrose). Currents were recorded in a bath solution containing (in mM): NaCl 130, KCl 3, CaCl2 2.5, MgCl2 0.6, HEPES 10, glucose 10; pH 7.4 (adjusted with Tris-base), 325 mOsm (adjusted with sucrose).
Neurons were held at −60 mV. Currents were evoked by 500 ms of focal (Fast-Step, Warner Instruments) application of test agents. A neuron was considered responsive to a test agent if there was an increase in current associated with the application of a drug > 3 standard deviations above the baseline fluctuations in holding current.
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3

Patch-Clamp Recordings of Neuronal Currents

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Whole-cell currents from cultured neurons or HEK293 cells were recorded using a MultiClamp 700B patch-clamp amplifier with Digidata 1440A controlled by pClamp v10.2 software (Molecular Devices). Recordings were low-pass-filtered at 100 Hz. Perfusing solution exchange was performed by BPS-8 fast-perfusion system (ALA Science Inc., Farmingdale, NY, USA) with the tip of the manifold placed 100–200 µm from the recorded cell. The external bathing solution contained (in mM): 140 NaCl; 2.8 KCl; 1.0 CaCl2; 10 HEPES, at pH 7.2–7.4, 310 mOsm. The pipette solution contained (in mM): 120 CsF, 10 CsCl, 10 EGTA, and 10 HEPES, 300 mOsm, pH 7.4. Patch-pipettes of 4−6 MΩ were pulled from Sutter BF150–89–10 capillaries. Experiments were performed at 23–25 °C. Both neurons and HEK293 cells were voltage-clamped at −70 mV (holding voltage, Vh). The liquid junction potential was ~12 mV between the Na+-containing bathing solution and the Cs+-containing pipette solution. Wherever Vh is shown, this value is indicated without a correction for the liquid junction potential. To activate NMDARs, both N-methyl-d-aspartate (NMDA) or l-homocysteine (HCY) were always co-applied with 30 µM glycine as a co-agonist.
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4

Voltage-clamp protocols for I-V analysis

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The signals were monitored and stored online at 10 kHz in an ASUS VivoBook Flip 14 laptop computer (TP412FA-0131A10210U; ASUS, Tainan, Taiwan) equipped with a Digidata 1440A interface (Molecular Devices). During the measurements with analog-to-digital and digital-to-analog conversion, the latter device was controlled using pCLAMP v10.7 software (Molecular Devices) run under Microsoft Windows 10 (Redmond, WA, USA). The laptop computer was put on the top of an adjustable Cookskin stand (Ningbo, Zheijiang, China) to allow efficient manipulation during the recordings. Through digital-to-analog conversion, the pCLAMP-created voltage-clamped protocols with varying rectangular or ramp waveforms were specifically designed and suited for determining the steady-state or instantaneous relationship pf current versus voltage (I–V) and voltage-dependent hysteresis of the current involved.
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5

Electrophysiological Signal Monitoring Protocol

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The signals, comprising potential and current tracings, were monitored on an HM-507 oscilloscope (Hameg, East Meadow, NY, USA) and digitally stored online at 10 kHz in an ASUS VivoBook Flip 14 laptop computer (TP412FA-0131A10210U; ASUS, Tainan, Taiwan) equipped with a 12-bit resolution Digidata 1440A interface (Molecular Devices). During the measurements with either analog-to-digital or digital-to-analog conversion, the latter device was controlled using pCLAMP v.10.7 software (Molecular Devices) run on Microsoft Windows 10 (Redmond, WA, USA). A laptop computer was put on the top of an adjustable Cookskin stand (Ningbo, Zheijiang, China) to allow efficient manipulation during the recordings.
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6

Patch-Clamp Recordings of NMDAR Currents in Rat Cortical Neurons

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Whole-cell currents from cultured rat cortical neurons were recorded using a MultiClamp 700B patch-clamp amplifier, low-pass filtered at 400 Hz, and digitized at the acquisition rate of 20 kilosamples per second using Digidata 1440A and pCLAMP v10.6 software (Molecular Devices). Solution exchange was performed by means of a fast solution application system as described earlier (Sibarov et al., 2015 (link)). The external bathing solution contained (in mM): 144 NaCl; 2.8 KCl; 1 or 2 CaCl2; 10 HEPES, at pH 7.2–7.4, osmolarity 310 mOsm. The pipette solution contained (in mM): 120 CsF, 10 CsCl, 10 EGTA, and 10 HEPES, osmolarity 300 mOsm, with pH adjusted to 7.4 with CsOH. Patch pipettes of 4–6 MΩ were pulled from Sutter BF150-89-10 borosilicate glass capillaries. Experiments were performed at room temperature (22–25°C). Currents were recorded on neurons voltage clamped at −70 mV. Data are reported without corrections for liquid junction potential, which was −11 mV in our experiments. NMDAR currents were elicited by 100 μM NMDA co-applied with 30 μM glycine as a co-agonist. Methyl-β-cyclodextrin (MβCD, 1.5 mM) application for 5 min was used to extract plasma membrane cholesterol.
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7

Whole-Cell Patch-Clamp Recording of Rat Cortical Neurons

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Whole-cell currents from cultured rat cortical neurons were recorded using a MultiClamp 700B patch-clamp amplifier, low-pass filtered at 400 Hz, and digitized at the acquisition rate of 20 kilosamples per second using Digidata 1440A and pClamp v10.6 software (Molecular Devices). Solution exchange was performed by means of a fast perfusion system as described earlier [21 (link)]. The external bathing solution contained (in mM): 144 NaCl; 2.8 KCl; 1 or 2 CaCl2; 10 HEPES, at pH 7.2–7.4, osmolarity 310 mOsm. The pipette solution contained (in mM): 120 CsF, 10 CsCl, 10 EGTA, and 10 HEPES, osmolarity 300 mOsm, with pH adjusted to 7.4 with CsOH. Patch pipettes of 4–6 MΩ were pulled from Sutter BF150-89-10 borosilicate glass capillaries. Experiments were performed at room temperature (22–25 °C). Currents were recorded on neurons voltage clamped at −70 mV. Data are reported without corrections for liquid junction potential, which was −11 mV in our experiments. NMDAR currents were elicited by 100 µM NMDA co-applied with 30 µM glycine as a co-agonist.
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8

Electrophysiological Data Analysis

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Recorded electrophysiological data were processed offline using pClamp v10.6 (Molecular Devices, Sunnyvale, CA), Origin 2017/2018 (OriginLab Corporation, Northhampton, MA) and Excel (Microsoft, Redmond, WA). Data were analysed using Fitmaster (HEKA Electronics), SPSS24 (SPSS Inc., Chicago, IL), Origin and GraphPad Prism (GraphPad Software, San Diego, CA). Unless otherwise stated, data were expressed as mean ± standard error (SEM). Statistical tests used for each individual data set and P-values are stated in the Results section.
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9

Patch-Clamp Recordings of NMDAR Currents

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Whole-cell currents were recorded from cultured rat cortical neurons using a MultiClamp 700B patch-clamp amplifier. Recordings were low-pass filtered at 400 Hz and digitized at the acquisition rate of 20,000 samples per second by Digidata 1440A controlled by pClamp v10.6 software (Molecular Devices). Solution exchange was performed by means of a fast solution application system as described earlier (Sibarov et al., 2015 (link)). Unless otherwise specified, the external bathing solution contained (in mM): 144 NaCl; 2.8 KCl; 1.0 CaCl2; 10 HEPES, at pH 7.2–7.4, osmolarity 310 mOsm. The intrapipette solution contained (in mM): 120 CsF, 10 CsCl, 10 EGTA, and 10 HEPES, osmolarity 300 mOsm, with pH adjusted to 7.4 with CsOH. Patch pipettes of 4–6 MΩ were pulled from Sutter BF150-89-10 borosilicate capillaries. Experiments were performed at 22–25°C. Under control conditions, neurons were voltage clamped at −70 mV. Data are reported without corrections for liquid junction potential, which was measured as −11 mV. To activate NMDARs, 100 µM NMDA was always co-applied with 10 µM glycine as co-agonist. Some experiments were performed on neurons loaded with BAPTA. To load BAPTA, cortical neuron cultures were incubated in a bathing solution containing 5 µM BAPTA-AM for 1 h.
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10

Whole-Cell Recordings from Podocytes

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Methods for conventional whole-cell recordings from podocytes were carried out by standard methods that have been described in detail previously (Anderson et al., 2013 (link), 2014 (link); Roshanravan and Dryer, 2014 (link)). Recordings were made with an Axopatch 1D amplifier (Molecular Devices) and analyzed using pClamp™ v10 software (Molecular Devices). For analyses of currents through TRPC6, the bath solution contained 150 mM NaCl, 5.4 mM CsCl, 0.8 mM MgCl2, 5.4 mM CaCl2, and 10 mM HEPES, pH 7.4. Pipette solutions contained 10 mM NaCl, 125 mM CsCl, 6.2 mM MgCl2, 10 mM HEPES, and 10 mM EGTA, pH 7.2. The presence of Cs+ in bath and pipette solutions, and the absence of K+ in those solutions, precludes current flowing through KCa1.1 channels that are also expressed in these cells (Kim et al., 2008 (link)). The relatively high Ca2+ concentration in the bath solution markedly increases stability of whole cell recordings. In experiments on TRPC6, currents were periodically evoked by 2.5-s ramp voltage commands (−80 mV to +80 mV) from a holding potential of −40 mV. Whole cell current amplitudes were quantified at +80 mV. Recording pipettes in all experiments had resistances of 2–5 MΩ, and it was possible to maintain stable recordings while compensating up to 80% of this series resistance.
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