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2 protocols using z vad fmk z vad

1

Synthesis and Evaluation of NOSH-Aspirin

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NOSH-Aspirin (NBS-1120) 4-(3-thioxo-3H-1,2-dithiol-5-yl)phenyl 2-((4-(nitrooxy)butanoyl)oxy), benzoate was synthesized as described previously [19 (link)] and was a gift from Avicenna Pharmaceuticals Inc, (New York, NY). The structural components of NOSH-Aspirin are shown in Figure 1. Aspirin was obtained from Sigma (St Louis, MO). Stock solutions (10 mM or 100 mM) were made in DMSO; final DMSO concentration was adjusted in all media to 1%. The pancaspase inhibitor z-VAD-FMK (z-VAD) was obtained from Promega (Madison, WI) and used according to the manufacturer’s instructions. Human pancreatic cancer MIA PaCa-2 (CRL-1420) and BxPC-3 (CRL-1687) cells were purchased from American Type Culture Collection (ATCC, Manassas, VA) with verification of authenticity indicating them to be mycoplasma-free; human normal pancreatic epithelial ACBRI 515 was purchased from the European Collection of Cell Culture (ECACC, Salisbury, UK) and certified as such by the supplier. Cells were maintained in RPMI-1640 media (Invitrogen, Carlsbad, CA) that was supplemented with 10% fetal bovine serum and 100 μg/mL penicillin, and 100 μg/mL streptomycin (Invitrogen, Carlsbad, CA) and maintained at 37°C and in an atmosphere of 5% CO2/95% air.
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2

Investigating NINJ1 in Cell Death

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Ultra-pure LPS (Escherichia coli O111:B4, InvivoGen), Pam3CSK4 (InvivoGen), nigericin (InvivoGen), ultra-pure flagellin (from Pseudomonas aeruginosa, InvivoGen), venetoclax (TOCRIS), doxorubicin (Enzo Life Sciences), mouse TNF (Genentech), actinomycin D (EMD Millipore), z-VAD-FMK (zVAD; Promega). Antibodies used for western blotting were rabbit anti-mouse NINJ1 clone 25 (Ninj1-25, Genentech, 0.2 µg ml−1)1 (link), β-actin HRP (AC-15, Novus Biologicals, 0.1 µg ml−1), HRP–anti-rabbit F(ab′)2 fragment (Jackson Immunoresearch, 1:5,000), and HRP–anti-rabbit Fc fragment (Jackson Immunoresearch, 1:5,000). A list of all antibodies used in this manuscript is provided in Supplementary Table 1. cDNAs encoding N-terminally Flag-tagged NINJ1 (full-length, delta 2–73, delta 142–152 and mutant D147VAPR → A147AAAA) were cloned into pcDNA3.1 Zeo(+) (Thermo Fisher Scientific).
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