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5 protocols using anti p mtor

1

Investigating CD44-mediated Leukemia Cell Signaling

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The NB4 cell line was obtained from Meisen (Zhejiang, People's Republic of China). Fetal bovine serum and RPMI 1640 medium were purchased from HyClone (Logan, UT). Hyaluronan and human fibrinogen were obtained from Suolaibao (Beijing, People's Republic of China). Anti–phosphatidylinositol 3-kinase (PI3K) antibodies and anti–protein kinase B (Akt) antibodies were purchased from Wanleibio (Shanghai, People's Republic of China). Anti-mTor, anti–P-mTor, and anti-CD44 antibodies were purchased from Proteintech (Hubei, People's Republic of China). Human thrombin was obtained from Enzyme Research Laboratories (South Bend, IN). The human CD44 enzyme-linked immunosorbent assay (ELISA) kit was obtained from Abcam (Stamford, CT). ATRA, ATO, and DNR were purchased from Sigma (St. Louis, MO). Polyvinylidene difluoride membranes, anti-mouse antibodies, and anti-rabbit antibodies were obtained from Beyotime (Shanghai, People's Republic of China). We prepared Alexa Fluor-488– or Alexa Fluor-647–conjugated lactadherin. Anti-CD41a and anti–P-selectin antibodies were purchased from Abcam.
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2

Evaluating Neurodegenerative Disease Pathways

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EGFP‐TFEB WT (38,119), mRFP‐GFP‐LC3B (84,573), EGFP‐α‐synucleinA53T (40,823), and PHM‐α‐synucleinA53T (40,825) were supplied by Addgene. GFP‐Adenovirus (AdV) and A53T‐AdV were purchased from Obio Technology. Corp. Ltd. anti‐α‐synuclein (10842‐1‐AP), anti‐PARP1 (13371‐1‐AP), anti‐TFEB (13372‐1‐AP), anti‐m‐TOR (20657‐1‐AP), anti‐LAMP1 (21997‐1‐AP), and anti‐Lamin B (12987‐1‐AP) were purchased from Proteintech; anti‐p‐m‐TOR (#5536), anti‐SIRT1 (#8469), anti‐β‐ACTB (#4970), anti‐LC3B A/B (#4211), and anti‐PGC‐1α (#2178s) were purchased from CST; anti‐TH (Santa, sc‐25269); anti‐γ‐H2A.X (Abcam, ab243906); anti‐PAR (Trevigen,4335‐MC‐100); Veliparib (Selleck, s1004); Veliparib (TargetMol; T2591); SRT2104 (Selleck, s7792); EX527(Selleck, s1541); CQ (Selleck, s8808); rapamycin (MedChenExpress, HY‐10219); and KPT‐330 (Selleck, s725).
Primers:
ACTB: F‐CATTGCTGACAGGATGCAGAAGG‐, R‐TGCTGGAAGGTGGACAGTGAGG‐
LC3B: F‐GGACCTGCTGCTTCTCTAA‐, R‐ACTGCTGAGTGAAAGGGTGT‐
LAMP1: F‐AGCCCTGGAATTGCAGTTTG‐, R‐CACTGTCCACCTTGAAAGCC‐
α‐synucleinA53T‐tg: F‐TGTAGGCTCCAAAACCAAGG‐, R‐TGTCAGGATCCACAGGCATA‐
siPARP1: F‐GCAGCGAGUAGUAUUCCCAAdTdT‐, R‐UUGGGAAUACUCUCGCUGCdTdT‐;
siSIRT1: F‐ACGAUGACAGAACGUCACAdTdT‐, R‐UGUGAGUUCUGUCAUCGUdTdT‐
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Immunoblotting of Signaling Proteins

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The protocols were described in our previous reports [19 (link)]. The primary antibodies used were as follows: anti-FLAG, anti-AKT1, anti-p-AKT1, anti-mTOR, anti-p-mTOR (CST), and anti-GAPDH and anti-PDZK1 (Proteintech, USA).
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Exosome Protein Analysis via Western Blot

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Different groups of GH3 and AtT20 cells were lysed on ice with RIPA buffer. The isolated exosomes can be directly mixed with the loading buffer. Then, protein lysates were electrophoresed on 10% SDS polyacrylamide gels, transferred onto PVDF membranes (Millipore, Burlington, MA, USA), and blocked with NcmBlot blocking buffer (NCM Biotech, Suzhou, China). Afterward, primary antibodies: anti-ONECUT2 (Biorbyt, Cambridge, UK, cat: orb49419, 1:1000), anti-PI3K (Proteintech, Wuhan, China, cat: 60225-1-Ig, 1:1000), anti-P-PI3K (Thermofisher, Waltham, MA, USA, cat: PA5-104853, 1:1000), anti-PKCδ (Proteintech, Wuhan, China, cat: 14188-1-AP, 1:1000), anti-P-PKCδ (Proteintech, Wuhan, China, cat: 29562-1-AP, 1:1000), anti-mTOR (Protentech, Wuhan, China, cat: 66888-1-Ig, 1:1000), anti-P-mTOR (Proteintech, cat:67778-1-Ig, 1:1000), anti-AKT (Proteintech, cat: 60203-2-Ig, 1:1000), anti-P-AKT (Proteintech, Wuhan, China, Cat: 80455-1-RR, 1:1000), anti-ERK (Proteintech, Wuhan, China, cat: 11257-1-AP, 1:1000), anti-P-ERK (Proteintech, Wuhan, China, cat: 80031-1-RR, 1:1000), anti-GAPDH (Proteintech, Wuhan, China, Cat: 60004-1-Ig, 1:1000), anti-CD63 (Santa Cruz, CA, USA, cat: sc-5275;1:200), anti-CD9 (Santa Cruz, CA, USA, cat: sc-13118; 1:200) were added at 4 °C overnight. Subsequently, secondary antibodies (1:5000; Proteintech, Wuhan, China) were incubated for 2 h.
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5

Metformin Modulates Cell Signaling

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Metformin was purchased from MedChemExpress (Monmouth Junction, NJ, USA). 3-(4,5-Dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium bromide (MTT) was purchased from Sigma-Aldrich (St. Louis, MO, USA). The following antibodies were used: anti-P53, anti-P21, anti-PI3K, anti-p-PI3K, anti-AKT, anti-p-AKT, anti-4EBP1, anti-p-4EBP1, anti-Bcl−2, anti-BAX, anti-cleaved caspase−3, anti-HIF−1α, anti-BAK (Cell Signaling Technology, Danvers, MA, USA); anti-P16, anti-GAPDH, anti-mTOR, anti-p-mTOR (Proteintech group, Inc., Rosemont, IL, USA); anti-Drp1, anti-Mcl−1, anti-PINK1, anti-Parkin, anti-MMP1 (Abcam, Cambridge, MA, USA); anti-HO−1, anti-Nrf2(Sangon Biotech, Shanghai, China); the antibodies were diluted according to the manufacturer’s instructions.
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