The largest database of trusted experimental protocols

9 protocols using ma5 17040

1

Quantification of Inflammatory Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human D‐lactate (K667‐100, BioVision), human I‐FABP (CSB‐E08024h, CUSABIO, China), human & mouse IL‐1β (P420B, Thermo Fisher, China), human & mouse IL‐6 (M620, Thermo Fisher), human & mouse TNF‐α (AMC3012, Thermo Fisher) and human & mouse MCP‐1 (MA5‐17040, Thermo Fisher) in serum or intestinal tissue were analysed using ELISA commercial kits according to the manufacturer's protocols.
+ Open protocol
+ Expand
2

Western Blot Analysis of Liver Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot analysis was performed following the protocol described previously14 (link) to evaluate the protein expression of arachidonate 12-lipoxygenase 12S type (ALOX12), cytochrome P450 (CYP) 4 (CYP4A), enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase (EHHADH), interleukin (IL) 1 receptor type I (IL-1R1) and C–C motif chemokine ligand (CCL) 2 in the liver tissue. The protein expression of β-actin was used as internal reference. The antibody of ALOX12 (PA5-78760), EHHADH (PA5-37009) and CCL2 (MA5-17040) were the products of Thermo Fisher Scientific Inc. (MA, USA). The antibody of CYP4A (Ab140635) and IL-1R1 (Ab8154) were purchased from Abcam Inc. (MA, USA). The antibody of β-actin (66009-1-Ig) was the product of Proteintech Group, Inc. (IL, USA). The goat anti-rabbit IgG and goat anti-mouse IgG (Beijing Dingguo Changsheng Biotechnology CO.LTD, Beijing, China) were used as the secondary antibody. The blots were scanned with Fully Automatic Digital Gel/Chemiluminescence Image Analysis System (4600SF, Tanon, Shangha, China). The density of the bands was analyzed with ImageJ software.
+ Open protocol
+ Expand
3

Immunohistochemical Analysis of Adipose Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
For hematoxylin and eosin (HE) staining, immunohistochemical, or immunofluorescence analysis, standard 5 µm sections of formalin-fixed and paraffin-embedded tissue blocks were used. Immunohistochemical staining was performed as described in [34 (link)], using the following primary antibodies: rat anti-F4/80 (BLD-123101, 1:200, BioLegend, San Diego, CA, USA); rabbit anti-FHL2 (provided by the Schüle Laboratory, University of Freiburg, Freiburg, Germany); mouse anti-MCP-1 (MA5-17040, 1:100, Invitrogen, Thermo Fisher Scientific, Waltham, MA, USA); sheep anti-NPY (ab6173, 1:200, Abcam, Cambridge, UK); and rabbit anti-UCP1 (#14670, 1:200, Cell Signaling Technology, Danvers, MA, USA). For immunofluorescence, Alexa Fluor 546-conjugated goat anti-rabbit IgG (A11010, 1:1000; Invitrogen, Thermo Fisher Scientific); FITC-conjugated rabbit anti-rat IgG (F1763, 1:500, Sigma); and Cy3- conjugated donkey anti-sheep IgG (713-165-003, 1:1000, Jackson ImmunoResearch Laboratories, Inc., West Grove, PA, USA) were used as secondary antibodies.
Microscopic images were taken, analyzed, and processed using an Olympus™ IX83 microscope with the cellSens Dimension software (Olympus Soft Imaging Solutions GmbH, Münster, Germany). Adipocyte size was analyzed using the open source software ImageJ as described in [36 (link)].
+ Open protocol
+ Expand
4

Immunohistochemical Analysis of Adipose Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
For hematoxylin and eosin (HE) staining, immunohistochemical, or immunofluorescence analysis, standard 5 µm sections of formalin-fixed and paraffin-embedded tissue blocks were used. Immunohistochemical staining was performed as described in [34 (link)], using the following primary antibodies: rat anti-F4/80 (BLD-123101, 1:200, BioLegend, San Diego, CA, USA); rabbit anti-FHL2 (provided by the Schüle Laboratory, University of Freiburg, Freiburg, Germany); mouse anti-MCP-1 (MA5-17040, 1:100, Invitrogen, Thermo Fisher Scientific, Waltham, MA, USA); sheep anti-NPY (ab6173, 1:200, Abcam, Cambridge, UK); and rabbit anti-UCP1 (#14670, 1:200, Cell Signaling Technology, Danvers, MA, USA). For immunofluorescence, Alexa Fluor 546-conjugated goat anti-rabbit IgG (A11010, 1:1000; Invitrogen, Thermo Fisher Scientific); FITC-conjugated rabbit anti-rat IgG (F1763, 1:500, Sigma); and Cy3- conjugated donkey anti-sheep IgG (713-165-003, 1:1000, Jackson ImmunoResearch Laboratories, Inc., West Grove, PA, USA) were used as secondary antibodies.
Microscopic images were taken, analyzed, and processed using an Olympus™ IX83 microscope with the cellSens Dimension software (Olympus Soft Imaging Solutions GmbH, Münster, Germany). Adipocyte size was analyzed using the open source software ImageJ as described in [36 (link)].
+ Open protocol
+ Expand
5

Protein Extraction and Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein extraction and Western blotting were performed as described in [32 (link)] by applying the following primary antibodies: mouse anti-actin (MAB1501, 1:10,000, Merck Millipore); rabbit anti-Fhl2 (provided by the Schüle Laboratory, University of Freiburg, Freiburg im Breisgau, Germany); rabbit anti-GAPDH (#2118, 1:1000, Cell Signaling); mouse anti-MCP-1 (MA5-17040, 1:1000, Invitrogen); and rabbit anti-UCP1 (#14640, 1:1000, Cell Signaling). Mouse anti-rabbit (sc-2357, 1:10,000, Santa Cruz Biotechnology, Dallas, TX, USA) and horse anti-mouse (#7076, 1:3000, Cell Signaling) were used as secondary antibodies.
For the quantification of NPY and MCP-1 in tissue and cell protein lysates or supernatants, commercially available mouse NPY (Merck, Darmstadt, Germany) and CCL2/MCP-1 (R&D Systems, Minneapolis, MN, USA) ELISA kits were used according to the manufacturer’s instructions.
+ Open protocol
+ Expand
6

Comprehensive Immunohistochemistry and Immunofluorescence Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunohistochemistry, sections were incubated with antibodies against apoB (1:50 Proteintech), apoA (1:50 Proteintech), F4/80 (1:50, ab111101, Abcam). For immunofluorescence staining, sections were blocked with 5% bovine serum albumin in phosphate-buffered saline (PBS) for 1 h. Incubations with primary antibodies was performed overnight at 4°C at the following dilutions: Runx2 (1:50, AF2593, Beyotime), α−smooth muscle actin (α−SMA, 1:250, ab7817, Abcam), VCAM−1 (1:25, MA5−11447, Invitrogen), MCP−1 (1:200, MA5−17040, Invitrogen), Collagen I (1:200, GB11022−3, Servicebio), Collagen III (1:200, ab7778, Abcam), and CD31 (1:50, ab28364, Abcam). After primary antibody incubation, the sections were washed in PBS and incubated with Alexa 488 anti-rabbit (1:500, A21206, Invitrogen) and Alexa 555 anti-mouse (1:500, A−31570, Invitrogen) secondary antibodies for 1 h at room temperature. Subsequently, the slides were washed and counterstained with 4′,6−diamidino-2-phenylindole (DAPI, 1:10,000, Life Technologies) for the identification of nuclei. Images were obtained by a fluorescence microscopy (DMI2500, Leica, Germany). Fluorescence intensity corrected by background intensity was quantified using ImageJ software (version 1.53c; National Institutes of Health) as described previously (22 (link)).
+ Open protocol
+ Expand
7

Protein Extraction and Western Blotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein extraction and Western blotting were performed as described in [32 (link)] by applying the following primary antibodies: mouse anti-actin (MAB1501, 1:10,000, Merck Millipore); rabbit anti-Fhl2 (provided by the Schüle Laboratory, University of Freiburg, Freiburg im Breisgau, Germany); rabbit anti-GAPDH (#2118, 1:1000, Cell Signaling); mouse anti-MCP-1 (MA5-17040, 1:1000, Invitrogen); and rabbit anti-UCP1 (#14640, 1:1000, Cell Signaling). Mouse anti-rabbit (sc-2357, 1:10,000, Santa Cruz Biotechnology, Dallas, TX, USA) and horse anti-mouse (#7076, 1:3000, Cell Signaling) were used as secondary antibodies.
For the quantification of NPY and MCP-1 in tissue and cell protein lysates or supernatants, commercially available mouse NPY (Merck, Darmstadt, Germany) and CCL2/MCP-1 (R&D Systems, Minneapolis, MN, USA) ELISA kits were used according to the manufacturer’s instructions.
+ Open protocol
+ Expand
8

Immunohistochemistry Protocol for Tissue Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemistry was performed as described previously [25] (link), [26] (link), [27] (link). For immunohistochemistry experiments, frozen 8-μm-thick sections were fixed in 4% paraformaldehyde. The sections were blocked by 8% normal goat serum for 4 h and then incubated in specific primary antibodies. After being washed three times by PBS, the sections were incubated with horseradish peroxidase-conjugated secondary antibodies. Staining is visualized using substrate diaminobenzidine. The following antibodies were used: α-smooth muscle actin (α−SMA, #ab7817, Abcam, Cambridge, UK, 1: 600 dilution), PCNA (clone PC10, Millipore, Milford, MA, USA, 1;1000 dilution), tumor necrosis factor-α (TNF-α, #ab9635, Abcam, Cambridge, UK, 1: 1000 dilution), interleukin-1β (IL-1β, #MAB4012, R&D Systems, Minneapolis, MN, USA, 1: 1000 dilution), CD68 (#MA5-13324, Invitrogen, Carlsbad, CA, USA, 1: 2000 dilution), 3-nitrotyrosine (3-NT, #sc-32757, 1: 4000 dilution) malondialdehyde (MDA, #ab6463, 1: 2000 dilution), myeloperoxidase (MPO, #PA5-16672, Invitrogen, 1: 2500 dilution), chemokine (C-C motif) ligand 2 (CCL2, #MA5-17040, Invitrogen, 1: 1500 dilution) and chemokine (CXC motif) ligand 2 (CXCL2, #PA5-28820, Invitrogen, 1: 2000 dilution).
+ Open protocol
+ Expand
9

Macrophage-Mesenchymal Stem Cell Co-Culture

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse Mϕ were isolated as described above and seeded in 6-well plates. Medium was replaced with fresh DMEM on day 6 and then co-cultured with hAM-MSCs separated by a Transwell insert (0.4 μm pore size; Corning Life Sciences) at a ratio of 1:3 hAM-MSC:Mϕ for a further 48 h (n > 10). For blocking or antibody neutralization studies, seeded hAM-MSCs were preincubated for 1 h with 30 μM COX-2 inhibitor NS-398 (Cayman Chemical) (n = 6); neutralizing antibodies from R&D Systems anti-hCXCL12 (10 μg/mL; AF-310), anti-hIL-10 (5 μg/mL; AF-217), anti-hTGF-β1 (25 μg/mL; AF-246), anti-hIGF1 (15 μg/mL; AF-291), or anti-hCCL2 (1 μg/mL; MA5-17040; Invitrogen) before co-culturing with Mϕ as above (n > 4 per antibody group). Subsequently, cell culture supernatants, RNA, and whole cells were collected for enzyme-linked immunosorbent assay (ELISA), quantitative real-time PCR, and flow cytometry analysis.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!