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6 protocols using erk1 sirna

1

BV2 Cell Culture and BRAF Transduction

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BV2 cells (ATCC, Manassas, VA, USA, Cat# CRL-2467, RRID: CVCL_5744) were cultured with high-glucose Dulbecco’s Modified Eagle Medium (DMEM; Thermo Fisher Scientific) containing 10% fetal bovine serum (FBS; Thermo Fisher Scientific) and high glucose DMEM/F12 (Thermo Fisher Scientific) containing 10% FBS at 37°C in 5% CO2 under constant temperature and humidity. After transduction with BRAFV600E, BRAFWT, and vector lentivirus, respectively, for 24 hours, cells were cultured for 24 hours in DMEM/F12 without fetal bovine serum (FBS), and then medium and cells were collected for subsequent experiments. Constructs used were: pMD2.G (Addgene, Cat# 12259, RRID: Addgene_12259), psPAX2 (Addgene, Cat# 12260, RRID: Addgene_12260), pHAGE-BRAFV600E plasmid (Addgene, Cat# 116204, RRID: Addgene_116204), pHAGE-BRAFWT plasmid (Addgene, Cat# 116719, RRID: Addgene_116719), pBabe-Puro-BRAFV600E plasmid (Addgene, Cat# 15269, RRID: Addgene_15269), gag/pol-Retroviral plasmid (Addgene, Cat# 14887, RRID: Addgene_14887), Control siRNA (Cell Signaling Technology, Boston, MA, USA, Cat# 6568S), SAPK/JNK siRNA (Cell Signaling Technology, Cat# 6232S), ERK1 siRNA (Cell Signaling Technology, Cat# 6436S), ERK2 siRNA (Cell Signaling Technology, Cat# 6578S).
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2

Silencing ERK1, ERK2, and JNK in Neurons

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Primary neurons and microglial cells were seeded in 6-well plates and transfected with ERK1 siRNA (Cell Signaling Technology), ERK2 siRNA (Cell Signaling Technology), SAPK/JNK siRNA (Cell Signaling Technology) at 80% cell confluence on day 4 in culture. ERK1 siRNA, ERK2 siRNA, JNK siRNA, and Lipofectamine RNAiMAX Transfection Reagent (Thermo Fisher Scientific) were diluted in OPTI-MEM medium (Thermo Fisher Scientific), mixed gently, and incubated for 5 minutes to allow complex formation. The cells were transfected by adding the RNAi-Lipofectamine complex (Invitrogen) dropwise to medium to achieve a siRNA concentration of 100 nM. The cells were collected 48 hours after the transfection for subsequent experiments (Kawakami et al., 2016).
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3

Knockdown of ERK and JNK Signaling

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Primary neurons and microglial cells were seeded in 6-well plates and transfected with ERK1 siRNA (Cell Signaling Technology, USA), ERK2 siRNA (Cell Signaling Technology), SAPK/JNK siRNA (Cell Signaling Technology) at 80% cell con uence on day 4 in culture. ERK1 siRNA, ERK2 siRNA, JNK siRNA and Lipofectamine RNAiMAX Transfection Reagent (Thermo Fisher Scienti c) were diluted in OPTI-MEM medium (Thermo Fisher Scienti c), mixed gently, and incubated for 5 min to allow complex formation. The cells were transfected by adding the RNAi-Lipofectamine complex dropwise to medium to achieve a siRNA concentration of 100 nmol/l. The cells were collected 48 h after the transfection for subsequent experiments [22] .
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4

Lentiviral Transduction of BRAF Variants

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Constructs used were: pMD2.G (Addgene, Cat# 12259, USA), psPAX2 (Addgene, Cat# 12260, USA), pHAGE-BRAF V600E plasmid (Addgene, Cat# 116204, USA), pHAGE-BRAF WT plasmid (Addgene, Cat# 116719, USA), pBabe-Puro-BRAF V600E plasmid (Addgene, Cat# 15269, USA) , gag/pol-Retroviral plasmid (Addgene, Cat# 14887, USA), Control siRNA (Cell Signaling Technology, Cat# 6568S, USA), SAPK/JNK siRNA (Cell Signaling Technology, Cat# 6232S, USA), ERK1 siRNA (Cell Signaling Technology, Cat# 6436S, USA), ERK2 siRNA (Cell Signaling Technology, Cat# 6578S, USA). Microglial cell line BV2 cells BV2 cells (ATCC, Cat# CRL-2467, USA) were cultured with high-glucose DMEM (Gibco) containing 10% FBS (Gibco) and high glucose DMEM/F-12 (Gibco) containing 10% FBS at 37°C in 5% CO2 under constant temperature and humidity. After transduction with BRAF V600E , BRAF WT , and vector lentivirus, respectively, for 24 h, cells were cultured for 24 h in DMEM/F12 without FBS, and then medium and cells were collected for subsequent experiments.
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5

Knockdown of ERK and JNK Signaling

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Primary neurons and microglial cells were seeded in 6-well plates and transfected with ERK1 siRNA (Cell Signaling Technology, USA), ERK2 siRNA (Cell Signaling Technology), SAPK/JNK siRNA (Cell Signaling Technology) at 80% cell con uence on day 4 in culture. ERK1 siRNA, ERK2 siRNA, JNK siRNA and Lipofectamine RNAiMAX Transfection Reagent (Thermo Fisher Scienti c) were diluted in OPTI-MEM medium (Thermo Fisher Scienti c), mixed gently, and incubated for 5 min to allow complex formation. The cells were transfected by adding the RNAi-Lipofectamine complex dropwise to medium to achieve a siRNA concentration of 100 nmol/l. The cells were collected 48 h after the transfection for subsequent experiments [22] .
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6

Lentiviral Transduction of BRAF Variants

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Constructs used were: pMD2.G (Addgene, Cat# 12259, USA), psPAX2 (Addgene, Cat# 12260, USA), pHAGE-BRAF V600E plasmid (Addgene, Cat# 116204, USA), pHAGE-BRAF WT plasmid (Addgene, Cat# 116719, USA), pBabe-Puro-BRAF V600E plasmid (Addgene, Cat# 15269, USA) , gag/pol-Retroviral plasmid (Addgene, Cat# 14887, USA), Control siRNA (Cell Signaling Technology, Cat# 6568S, USA), SAPK/JNK siRNA (Cell Signaling Technology, Cat# 6232S, USA), ERK1 siRNA (Cell Signaling Technology, Cat# 6436S, USA), ERK2 siRNA (Cell Signaling Technology, Cat# 6578S, USA). Microglial cell line BV2 cells BV2 cells (ATCC, Cat# CRL-2467, USA) were cultured with high-glucose DMEM (Gibco) containing 10% FBS (Gibco) and high glucose DMEM/F-12 (Gibco) containing 10% FBS at 37°C in 5% CO2 under constant temperature and humidity. After transduction with BRAF V600E , BRAF WT , and vector lentivirus, respectively, for 24 h, cells were cultured for 24 h in DMEM/F12 without FBS, and then medium and cells were collected for subsequent experiments.
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