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Sybr green master with rox kit

Manufactured by GeneCopoeia
Sourced in United States

The SYBR-Green Master with Rox kit is a real-time PCR reagent designed for quantitative gene expression analysis. It contains a premixed solution of SYBR Green I dye, DNA polymerase, dNTPs, and necessary buffers and additives for performing qPCR experiments. The kit is compatible with real-time thermal cyclers that require the use of the Rox passive reference dye.

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4 protocols using sybr green master with rox kit

1

Quantifying Gene Expression with RT-qPCR

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RNA was extracted using TRIzol® (Thermo Fisher Scientific, Inc.) from each group of cells in the logarithmic growth phase. The concentration and purity of RNA were determined using a spectrophotometer at a wavelength of 260 and 280 nm. RT was performed using the All-in-One™ First-Strand cDNA Synthesis kit (GeneCopoeia) under the following reaction conditions: 42˚C for 60 min and 70˚C for 5 min. Primers were designed and synthesized by GeneCopoeia. qPCR was performed using the SYBR-Green Master with Rox kit (GeneCopoeia). The reaction conditions for qPCR were 95˚C for 10 min, followed by 40 cycles of 95˚C for 15 sec, 60˚C for 30 sec and 72˚C for 30 sec. mRNA expression in each group was quantified using the 2-ΔΔCq method (13 (link)).
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2

Quantitative Expression Analysis of p62 in GCTB

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Total RNA was extracted using TRIzol (Thermo Fisher Scientific, Inc.) from fresh GCTB tissues. RT-qPCR was performed using the All-in-One™ First-Strand cDNA Synthesis kit (GeneCopoeia, Inc.). The temperature protocol was as follows: 42°C for 60 min, 70°C for 5 min. The quantitative primer sequences for p62 and GAPDH primer sequences were as follows: p62 forward, 5′-TCAGGCTGTGGATGAAGTGGAA-3′ and reverse, 5′-CAGAAGATGTTTGTGGCGAGGA-3′; and GAPDH forward, 5′-TGACTTCAACAGCGACACCCA-3′ and reverse, 5′-CACCCTGTTGCTGTAGCCAAA-3′. The 7th and 8th exon sequencing were as follows: Exon 7 primer forward, 5′-AGACCCCTGCAGCCTTAACT-3′ and reverse, 5′-CCAACTCCTAACCTCCCACA-3′; and exon 8 primer forward, 5′-AGTTGAGCAGTGTGAAAAAGA-3′ and reverse, 5′-GCAGGGAGGGGTCAGGAGCGC-3′. RT-qPCR sequencing was performed using the SYBR-Green Master with Rox kit (GeneCopoeia, Inc.). The reaction conditions for qPCR were 95°C for 10 min, followed by 40 cycles of 95°C for 15 sec, 60°C for 30 sec and 72°C for 30 sec. The mRNA expression levels in each group were quantified using the 2−ΔΔCq method (11 (link)). Sequencing of the 7 and 8th exon amplification products was performed.
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3

Quantification of p62 mRNA expression

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Total RNA was extracted using TRIzol (Thermo Fisher Scientific, Inc., USA) from fresh bone metastasis tissues. Real-time quantitative polymerase reaction (RT−qPCR) was performed using the All−in−One™ First−Strand cDNA Synthesis kit (GeneCopoeia, Inc., USA). The temperature protocol was as follows: 37°C for 15 min, 50°C for 5 min, 98°C for 5 min. The primer sequences used for qPCR of p62 and GAPDH were as follows: p62 forward, 5’-CTGGGACTGAGAAGGCTCAC−3’ and reverse, 5’-GCAGCTGATGGTTTGGAAAT-3’; and GAPDH forward, 5’-CTTAGCACCCCTGGCCAAG-3’ and reverse, 5’-ATGTTCTGGAGAGCCCCG-3’. RT-qPCR sequencing was performed using the SYBR Green Master with Rox kit (GeneCopoeia, Inc., USA). The reaction conditions for qPCR were 95°C for 10 min, followed by 35 cycles of 95°C for 15 sec, 60°C for 30 sec and 72°C for 30 sec. The mRNA expression levels in each group were quantified using the 2-ΔΔCq method (16 (link)).
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4

Smooth Muscle Cell Apoptosis Induction

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Human ascending aortic smooth muscle cells (HA-VSMCs) were purchased from the Advanced Research Center, Central South University. Cells were cultured in complete medium [RPMI 1640 medium (Hyclone; GE Healthcare Life Sciences) containing 12% fetal bovine serum (both Gibco; Thermo Fisher Scientific, Inc.)] at 37˚C. All cells were routinely resuscitated and passaged and cells used in the following experiment were all in the logarithmic growth phase.
Apoptosis-inducing agents, including cycloheximide, which acted as a positive control, and aldosterone were purchased from Sigma-Aldrich; Merck KGaA, dissolved in dimethyl sulfoxide, and stored at 4˚C. Puromycin was purchased from InvivoGen, dissolved in complete medium, sterilized using a 0.22 µm filter and stored at -20˚C. Lipofectamine® 2000 was purchased from Invitrogen; Thermo Fisher Scientific, Inc. Fibulin-5 monoclonal antibody was purchased from Abcam. The Lenti-Pac™ HIV Expression Packaging kit, All-in-One™ First-Strand cDNA Synthesis kit and SYBR-Green Master with Rox kit were all purchased from GeneCopoeia, Inc.
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