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Flow cytometry analysis

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Flow cytometry analysis is a technique used to measure and analyze the physical and chemical characteristics of cells or particles in a fluid sample. It utilizes laser technology to detect and quantify various properties of individual cells, such as size, granularity, and the expression of specific molecules on the cell surface or within the cell.

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47 protocols using flow cytometry analysis

1

Oxidative Stress Assay in HASMCs

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HASMCs were digested by trpsin and re-suspended in 1 ml 2% BSA (beyotime biotechnology of Nanjing; China)/PBST. The cells were stained with DCFDA (2′,7′-Dichlorofluorescin diacetate, Sigma Aldrich, Japan) in dark at 37 °C for 30 min. Then the cells were washed three times in PBS and subjected to flow cytometry analysis (Becton Dickinson, USA).
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2

Annexin V-FITC Apoptosis Detection Assay

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The Annexin V-FITC Apoptosis Detection Kit microscopy (Beyotime, China, Catalog NO. C1062) was used as per the manufacturer's instructions for apoptosis detection. In brief, primary cardiomyocytes were enzymatically dissociated, harvested, and washed twice with PBS; the cells were resuspended in 195 µL binding buffer, stained with Annexin V-FITC, and then subsequently incubated with 5 µL of Annexin V-FITC and 10 µL of the PI working substrate for 20 minutes at room temperature in the dark. Cellular fluorescence was measured by flow cytometry analysis (Becton Dickinson). In the early stages of apoptosis, cells were Annexin V-positive, whereas the cells that were at the later stages were PI- and Annexin-V-positive; cells that were only PI-positive were necrotic.
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3

Cellular Internalization and Intranuclear Localization of TAT-PEG-Asp8-Dox Nanoparticles

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HCT8 (human colon cancer cell line) and HCT8/ADR (human colon cancer drug-resistant cell line) cells were seeded in 24-well plates at a density of 2×104 cells per well and were incubated for 24 h before use.
For cellular internalization observation, the cells were incubated with the TAT-PEG-Asp8-Dox NPs at an equivalent Dox concentration of 10 μg/mL in fresh culture medium with 10% FBS. After incubation for 4 h, the cellular uptake efficiency was determined by flow cytometry analysis (Becton Dickinson, USA).
For the intranuclear distribution study, after incubation with the TAT-PEG-Asp8-Dox NPs or free Dox for 4 h, the cells were washed twice with ice-cold PBS and were fixed with fresh 4% paraformaldehyde for 15 min at room temperature. The cell nuclei were counterstained with DAPI, and imaging was performed using confocal laser scanning microscopy (Olympus FV1000, Japan).
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4

Annexin V-FITC Apoptosis Detection

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The Annexin V‐FITC Apoptosis Detection Kit microscopy (C1062, Beyotime Biotechnology) was applied under the manufacturer's instructions for apoptosis detection. In brief, primary cardiomyocytes were moulded, harvested after trypsinization treatments and washed twice with PBS; the cells were resuspended in 195 µL binding buffer, stained with Annexin V‐FITC and then subsequently incubated with both 5 µL of Annexin V‐FITC and 10 µL of the PI working substrate for 20 minutes at room temperature in the dark. Cellular fluorescence was measured by flow cytometry analysis (Becton‐Dickinson, USA). In the early stages of apoptosis, cells were Annexin V‐positive, while cells that were both PI‐ and Annexin V‐positive were at the later stages, whereas cells that were only PI‐positive were necrotic.
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5

Annexin-V Apoptosis Assay in HEK293 Cells

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Example 24

Annexin-V Staining

HEK293 cells (2×105 cells/plate) were transfected with control siRNA and siRNA-Akt, and DMA, Radiation and DMA+Radiation treatments were given as described earlier and samples were collected at 3, 6, 12, 18 and 24 h (data not shown for 12 and 18 h). Samples were prepared according to the manufacturer's instructions (BD Pharmingen™ Annexin V: FITC Apoptosis Detection Kit I, Catalog Number 556547, USA) and the samples were subjected to flow cytometry analysis (Becton Dickinson).

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6

Cell Cycle and Apoptosis Analysis

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For cell cycle analysis, the cells were collected 48 h after electrical therapy. After washing with phosphate-buffered saline solution, 1 mL of precooled 70% ethanol was added, and the mixture was incubated overnight at 4 °C. Then, the cells were collected again by low-speed centrifugation and suspended in 500 μL of flow cytometry (FACS) buffer supplemented with 2.5 μL of 1.0 mg/mL RNase at room temperature for 15 min. Then, the cells were incubated with 25 μL of propidium iodide (1 mg/mL) at room temperature in the dark for 15 min. The distribution of the cell cycle was detected by flow cytometry analysis (Becton Dickinson, Franklin Lakes, NJ, USA).
In the apoptosis assay, the cells were placed into 6-well plates at a density of 5 × 105/well and grown overnight at 37 °C with 5% CO2. The electrical stimulation of SFB-TENGs with different outputs was applied after rectification for 1 h/day in each treatment group. After 48 h, the cells were collected for apoptosis assessment with Annexin-V (FITC) and PI kits (KeyGEN BioTECH, China) and subsequently analyzed by flow cytometry (Becton Dickinson, Franklin Lakes, NJ, USA). Furthermore, the treated cells were stained with calcein and PI (KeyGEN BioTECH, China) after 48 h. Then, a fluorescence microscope was used to obtain optical images.
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7

Generation of MDM and MDDC from PBMC

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MDM and monocyte-derived dendritic cells (MDDC), peripheral blood mononuclear cells (PBMC) were isolated from buffy coats of healthy adult donors by Ficoll density gradient centrifugation on MSL. The percentage of monocytes was determined by flow cytometry using forward scatter and side scatter properties. PBMC were resuspended in RPMI 1640 medium supplemented with glutamine, penicillin (100 IU/ml), and streptomycin (100 μg/ml). Cells were seeded into 24 well-plates (Costar, Cambridge, MA) at the concentration 1 × 106 adherent cells/ml and incubated at 37°C for 45 min. Nonadherent cells were removed by four washes. Adherent monocytes were incubated in RPMI medium with 10% fetal calf serum (FCS), glutamine, and antibiotics in the presence of 10 ng/ml rhM-CSF to differentiate to MDM or in the presence of a combination of rhGM-CSF and IL-4 (10 ng/ml) to differentiate to immature MDDC. The medium, including all supplements, was replaced on the 3rd day of differentiation. After 6 days of culture, adherent cells corresponding to the enriched fraction of monocyte-derived cells were harvested, washed, and used for subsequent experiments. Flow cytometry analysis (Becton Dickinson, San Jose, CA USA) demonstrated that the CD14+ CD16+ MDM and CD14 CD16 CD1a+ CD83 DC-SIGN+ immature MDDC were more than 90% pure.
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8

Terpenylated Wogonin Derivatives Attenuate LPS-Induced Oxidative Stress

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The protection of terpenylated wogonin derivatives on LPS-induced reactive oxygen intermediates productions was measured by DCFH (2′,7′-dichlorofluorescin) oxidized fluorescent products retained in RAW264.7 cells. Cells incubated with 50 μM terpenylated wogonin derivatives and 100 ng/mL LPS were loaded with DCFH-DA (dichlorofluorescin diacetate) dye for detecting the amount of intracellular reactive oxygen species. Analysis were performed at 3, 6, 24, and 48 h. Upon a 10 min incubation with DCFH-DA dye loading at dark, room temperature, cells were quickly immersed into ice-cold water incubation prior to flow cytometry analysis (Becton Dickson, Franklin Lakes, NJ, USA). Data analysis was completed by the CellQuest software (Becton Dickson, Franklin Lakes, NJ, USA). The percentage of cells population exerts fluorescence more than the second log values were considered and the geometrical means of fluorescent intensity were recorded.
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9

Characterization of PAR2 Expression

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Cells were seeded at 24 well plates overnight and were then treated with different nanoparticles for 48 h. For gene expression, total RNA of cells was isolated and then PAR2 gene expression was detected by RT-PCR. For cell surface expression of PAR2, cells were incubated with the primary antibody against PAR2 in PBS for 1 h and were then incubated with Cy3-conjugated affinipure goat anti-rabbit IgG followed by fluorescence detection using flow cytometry analysis (Becton Dickinson). For PAR2 protein expression, lung tissues were lysed and detected by Western blotting technique after drug treatments.
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10

Characterization of PAR2 Expression

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Cells were seeded at 24 well plates overnight and were then treated with different nanoparticles for 48 h. For gene expression, total RNA of cells was isolated and then PAR2 gene expression was detected by RT-PCR. For cell surface expression of PAR2, cells were incubated with the primary antibody against PAR2 in PBS for 1 h and were then incubated with Cy3-conjugated affinipure goat anti-rabbit IgG followed by fluorescence detection using flow cytometry analysis (Becton Dickinson). For PAR2 protein expression, lung tissues were lysed and detected by Western blotting technique after drug treatments.
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