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Coomassie r 250

Manufactured by Thermo Fisher Scientific
Sourced in United States

Coomassie R-250 is a dye used in protein gel electrophoresis for the detection and quantification of proteins. It is a blue dye that binds to proteins, forming a colored complex that can be visualized and analyzed.

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5 protocols using coomassie r 250

1

Protein Analysis by Edman Sequencing

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IL-7 samples were separated in Novex 16% tricine gels (Invitrogen, cat. no. EC6695BOX) as recommended by the supplier. Proteins in gels were stained with the SilverQuest Silver Staining Kit (Invitrogen cat. no. LC6070) or transferred onto PVDF membranes using the Trans-Blot Turbo Transfer System with associated materials and protocols (Biorad, cat. no. 1704150). For Edman sequencing, proteins on the PVDF membrane were stained with Coomassie Brilliant Blue (Coomassie R-250, Thermo Scientific, cat. no. 20278) and analyzed with the Procise 491cLC protein sequencer (Applied Biosystems) or the PPSQ-51A protein sequencer (Shimadzu). For the analysis of signaling molecules, proteins in cell lysates were separated in 4-12% Tris-glycine gels under reducing conditions and transferred to PVDF membranes. Membranes were blocked for 1 h in 5% BSA with TBST buffer (150 mM NaCl, 0.1% Tween 20, 50 mM Tris, pH 7.5) and incubated overnight with anti-pSTAT3 (Tyr705) (Cell Signaling, cat. no. 9138) or anti-β-actin (Proteintech, cat. no. 20536-1-AP) antibodies. After washing, the blot was incubated with peroxidase-conjugated anti-mouse IgG or anti-rabbit IgG for 1 h at room temperature. Finally, Western blot images were developed using the Vilber Lourmat Fusion system (Labtech International) and Pierce ECL Western Blotting Substrate (Thermo Fisher Scientific).
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2

Gelatin Zymography Protocol

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Concentrated CM (100 μg) was resolved on a 10% Tris-Glycine gel supplemented with 0.1% gelatin (Invitrogen). Gels were renatured in a buffer (2.5% (v/v) Triton X-100), followed by incubation in a developing buffer (5 mM Tris-Base, 4 mM HCl, 20 mM NaCl, 0.5 mM CaCl2) overnight at 37 °C and visualised with Coomassie R-250 (Thermo Fisher Scientific). Images of stained gels were captured under illumination using the UVP Imagestore 5000 (Ultra-Violet Products).
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3

Gelatinase Activity Assay Protocol

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Cell culture supernatants were collected, and 10 μL of each were mixed in Novex Tris‐Glycine SDS Sample Buffer (Thermo Fisher Scientific) and then loaded on Novex 10% Zymogram Plus (Gelatin) Protein Gels. Samples were electrophoresed and separated at 125 V for 2 hours. After electrophoresis, gels were renatured in Zymogram Renaturing Buffer (Thermo Fisher Scientific) at room temperature for 30 minutes and incubated overnight at 37°C in Zymogram Developing Buffer (Thermo Fisher Scientific). Gels were then stained with Coomassie blue staining solution (0.1% Coomassie R250 in 40% ethanol, 10% acetic acid; Thermo Fisher Scientific) for 2 hours and destained twice for 30 minutes in destaining solution (10% ethanol and 7.5% acetic acid). MMP activity appeared as a clear band on a dark background. Images of stained gels were captured using a CanoScan 9950F Flatbed Scanner (Canon).
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4

Brainstem Cytokine Quantification

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The NTS of the brainstem were sectioned and homogenized with T-PER (Thermo Fisher, Waltham, MA, USA) containing protease and phosphatase inhibitors cocktail at 4 °C. The total protein was harvested by grinding and centrifugation. The total protein content was quantitatively analyzed by Coomassie R-250 (Thermo Fisher, Waltham, MA, USA). The concentration of IL-1β, IL-6, TNF-α, and fractalkine of serum, CSF, or NTS protein lysate were measured by ELISA kit, performed according to the manufacturer’s instruction (Cloud-Clone Corp, Katy, TX, USA). Expression values were detected by Anthos Zenyth 200rt Microplate Reader (Biochrom, Cambridge, UK). The final values were calculated and normalized to NTS protein mass.
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5

Comprehensive Immunoassay Reagent Protocol

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Phenol solution (90%), Quillaja Saponin (Catalog# S2149), silver nitrate, sodium carbonate, sodium bicarbonate, sodium acetate, Tween 20, DMSO, fetal bovine serum, and casein were obtained from Sigma Aldrich. Tamarind seed polymer (Xyloglucan, Glyloid 2A) was purchased from Sumitomo Pharma, Japan. Laemmli Sample Buffer (2×) and Precision Plus Protein Dual Color Standard were purchased from Bio-Rad. Trichloroacetic acid, 99%, Bovine Serum Albumin Standard Pre-Diluted Set, Coomassie R-250, and phosphate-buffered saline were purchased from ThermoFisher. TMB ELISA Substrate and TMB stop (Abcam, Cambridge, UK), cross-adsorbed goat anti-mouse IgA, IgG1, and IgG2a, HRP-conjugated (Invitrogen, Waltham, MA, USA), ExpressPlus PAGE Gel, 4–20% (Genscript, Piscataway, NJ, USA), Thiazolyl blue tetrazolium bromide (MTT, Trenton, NJ, USA), 98% (Acros Organics, Geel, Belgium) and Brucella Selective Supplement (Oxoid) were used in this study.
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