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Multicycle

Manufactured by Actimetrics

The MultiCycle is a versatile laboratory equipment designed for performing multiple analytical tasks. It features a compact and modular design that allows for the integration of various analytical modules. The core function of the MultiCycle is to provide a platform for conducting diverse analytical procedures in a controlled and efficient manner.

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5 protocols using multicycle

1

Circadian Rhythm Assay in Fibroblasts

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Fibroblasts were cultured to confluence (~30,000 cells/well) in 96-well white plates (Greiner Bio-One, Gloucestershire, UK) using ADMEM (ThermoScientific) containing 10% FBS and 1% penicillin–streptomycin. Cells were synchronized with 200 nM dexamethasone, diluted in serum-free medium for an hour and washed twice with the same solution (ThermoScientific) before reconstituting with serum-free medium containing 1× B27 (ThermoScientific) and 400 μM luciferin (Gold Biotechnology, St. Louis, Missouri, USA). Bioluminescence was recorded for 4 days in Tecan M200 Pro readers. Actimetrics MultiCycle was used to determine the period and amplitude (baseline subtracted 24 h running average of the raw luminescence data smoothed over 8 h). For luminometric experiments involving the 62 fibroblast cell lines, three technical replicates per dose, per drug, were conducted once and averaged.
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2

High-Throughput Cell-Based Circadian Assay

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The cell-based circadian assay was carried out as described previously.26 (link)Bmal1-dLuc U2OS cells were cultured in a culture medium [Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% fetal bovine serum, 0.29 mg/mL of l-glutamine, 100 units/mL of penicillin, and 100 mg/mL of streptomycin]. The cells were suspended and seeded onto 384-well white color solid bottom plates with 20 μL (2000 cells) per well. After incubation for 2 days, 50 μL of the explant medium (DMEM supplemented with 2% B27, 10 mM HEPES, 0.38 mg/mL sodium bicarbonate, 0.29 mg/mL L-glutamine, 100 units/mL penicillin, 100 mg/mL streptomycin, 0.1 mg/mL gentamicin, and 1 mM luciferin, pH 7.2) was added to each well, followed by the treatment of 500 nL of compounds (8 μM to 1 nM; 3-fold serial dilution series in DMSO; final 0.7% DMSO). The 384-well plates were sealed with an optically clear film. The luminescence was recorded every 100 min with a microplate reader (Infinite M200, Tecan). The period data were obtained from the luminescence rhythm by the curve fitting program CellulaRhythm20 (link) or MultiCycle (Actimetrics), both of which gave similar results. Because of transient luminescence changes upon the medium change, the first 20 h data were excluded from the analysis.
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3

Circadian Behavior Tracking in Zebrafish

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Zebrafish (Danio rerio) larvae (3.5 dpf) were placed in each well of a 96 deep-well plate (96 Well Clear Assay Plate Pyramid Flat Bottom); 800 μL E3 medium (5 mM NaCl, 0.17 mM KCl, 0.33 mM CaCl2· 2H2O, 0.33 mM MgSO4· 7H2O, 10 mM HEPES, pH 7.2) containing the compound (10 μg/mL) was added to each well. The plate was set on DanioVision (Noldus) and the behavior of the fish was tracked under constant darkness with a CCD camera with infrared light. The amount of activity (i.e., distance moved) per minute was calculated using the image processing function of EthoVision XT11 (Noldus). The free-running period and phase were calculated using Actogram J and MultiCycle (Actimetrics), respectively19 . All animal studies were carried out in accordance with ARRIVE guidelines and all methods were in compliant with relevant guidelines and regulations and were approved by the Animal Experiment Committee of Nagoya University.
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4

Circadian Rhythms and Protein Stability

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A curve fitting program MultiCycle (Actimetrics) was utilized to determine the circadian period, and the luminescence intensity was calculated by averaging the intensity during the entire experiment. Due to transient changes in luminescence upon medium exchange, data from the first day was excluded from analysis. In degradation assays, half-life was obtained by one phase exponential decay fitting with Prism software (version 7.04, GraphPad Software; any open-access software can be used as an alternative, including the freely available R). In cellular thermal shift assays, band intensity was analyzed by ImageQuant TL software (version 8.1, GE Healthcare). In thermal shift assays, the highest peak of the dF/d
T curve (the first derivative of the fluorescence intensity against temperature) was defined as the melting temperature.
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5

Circadian Rhythm Profiling in Fibroblasts

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Fibroblasts were cultured to confluence (~30 000 cells/well) in 96-well white plates (Greiner Bio-One, Gloucestershire, UK) using ADMEM (ThermoScientific) containing 10% FBS and 1% penicillin-streptomycin. Cells were synchronized with 200nM dexamethasone, diluted in serum-free medium for an hour and washed twice with the same solution (ThermoScientific) before reconstituting with serum-free medium containing 1x B27 (ThermoScientific) and 400μM luciferin (Gold Biotechnology, St. Louis, Missouri, USA). Bioluminescence was recorded for 4 days in Tecan M200 Pro readers. Actimetrics MultiCycle was used to determine the period and amplitude (baseline subtracted 24h running average of the raw luminescence data smoothed over 8h). For luminometric experiments involving the 62 fibroblast cell lines, three technical replicates per dose, per drug, were conducted once and averaged.
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