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9 protocols using carboxyfluorescein succinimidyl ester (cfse)

1

CFSE-based Parasite Cytoadherence Assay

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The trophozoites were incubated with 5 μM CFSE (ThermoFisher Scientific) in PBS with 1% BSA on a gentle rotation at 37°C for 30 min. After washing three times with PBS to remove the excess dye, the parasites were suspended in keratinocyte serum-free medium (Gibco) for analysis. The CFSE-labeled parasites were co-cultured with hVECs at the multiplicity of infection (MOI) of 2 in a minimal thin layer of keratinocyte serum-free medium for 1 hr in 5% CO2. After washing the unbound trophozoites away with pre-warmed PBS, the CFSE signal was detected by inverted fluorescence microscopy (CFSE Ex/Em = 492/517) (Axiovert 200M, Zeiss). For each assay, the signal intensities quantified by ImageJ v.1.53k software (National Institutes of Health) in five independent microscopic fields were averaged to evaluate the relative parasite cytoadherence. The signal from the control parasites was defined at 100%.
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2

CFSE Labeling and Glucose-Dependent Fluorescence

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INS-1 832/13 cells were stained with a fluorescent dye carboxyfluorescein succinimidyl ester (CFSE) (#C34570, Thermofisher Scientific). Due to its covalent coupling reaction to intracellular molecules, fluorescent CFSE is retained within cells once incorporated. Briefly, the cells were incubated with 5 µM CFSE in Krebs buffer containing (mM) 120 NaCl, 4.7 KCl, 2.5 CaCl2, 1.2 KH2PO4, 1.2 MgSO4, 2.8 glucose, 25 NaHCO3, 10 HEPES (pH 7.4 with NaOH) for 30 min at 37 °C with 5% CO2. The cells were washed twice with Krebs buffer (as above) with 1 mg/ml BSA. Next, the cells were incubated for a further 10 min to allow CFSE to undergo full hydrolysis. Subsequently, the cells were perfused at a rate of 1 ml/min at 32 °C with Krebs buffer containing 2.8 or 16.7 mM glucose, respectively. The fluorescence from CFSE was monitored every min at excitation wavelength 492 nm and the emitted light signals were read at 517 nm long-pass filter on confocal microscopy (LSM 510, Carl Zeiss, Germany). The cell area was measured by ImageJ software (version 1.52a).
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3

In vivo T-cell competition assay

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For the in vivo competition assay, CD3+ T cells were isolated from three littermate piglets and cocultured with DCs (treated or not with PEDV). Then, the CD3+ T cells were purified and labeled with CFSE (green) or CM-DiI (red, Molecular Probes), respectively, for long-term cell labeling. Equal numbers of cells (1 × 107) from the two populations were then mixed and adoptively transferred into piglets (autologous) via front cavity vein injection. The recipient piglets were sacrificed 24 h after the injection. For the flow cytometry analyses, cells were isolated from PBMCs, duodenum, jejunum, and ileum. For histological analyses, the duodenum, jejunum, and ileum were washed with 0.1 M PBS (pH 7.4) and embedded in OCT compound (Sakura Finetechnical). The frozen tissues were cut into 10-μm sections and mounted onto poly-L-lysine-coated glass slides. The CM-DiI or CFSE-labeled cells were observed with a fluorescence microscope (Carl Zeiss). Investigators were not blinded to experimental groups. Pathologists interpreting slides were blinded to PEDV-treated and control animal identifiers.
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4

Prostate Epithelial Cell Lineage Tracing

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Parental PrEC or cancer cells were 2D cultured with 1 μM BrdU (Sigma-Aldrich) for 10 days for labeling of dividing cells. Cells were transferred to 3D Matrigel culture for 5 days to permit BrdU wash-out during spheroid growth (~6 cell cycles). PS were harvested by dispase digestion and attached to chamber slides during overnight culture in PrEGM. Spheres were fixed in ice cold acetone/methanol (1:1) and immunostained using mouse anti-BrdU antibody.
For CFSE/Far-red label-retention of live cells, parental PrEC were 2D cultured ±1 μM BrdU for 10 days followed by 5 μM CFSE (5(6)-Carboxyfluorescein N-hydroxysuccinimidyl ester) or Far-red (Life Technologies, Grand Island, NY) labeling for 30 minutes. Labeled PrEC were plated in 3D Matrigel in the absence of labels and PS cultured for 5 days. PSs were harvested as above and immunofluorescent stained for BrdU. Co-labeled BrdU+ and CFSE/Far-red label-retaining cells were identified and imaged by fluorescent microscopy (Zeiss Axioskop).
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5

Macrophage Infection with E. faecalis

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After 8 days of macrophage culture in complete medium with differentiating factors, M0 macrophages were infected with E. faecalis, labeled with 10 μM carboxyfluorescein succinimidyl ester [CFSE; eBioscience, Thermo Fisher Scientific]) as reported [19 (link)], at an MOI of 1 for 6 h. The CFSE-E. faecalis were added to the M0 macrophages at a cell density of 5 × 105 and kept in the aerobic chamber at 37°C and 5% CO2 atmosphere for 6 h. The macrophages were visualized with a bright field in the video mode to monitor bacteria uptake by endocytosis, using a Zeiss LSM 780 inverted confocal microscope (Carl Zeiss AG, Oberkochen, Germany).
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6

CFSE Labeling of P. gingivalis

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P. gingivalis strain 381 suspension was incubated with 5 μM CFSE (Molecular Probes, Eugene, OR, USA) in PBS for 15 min and washed twice in PBS. After 3 h of infection of VSMCs with CFSE-tagged P. gingivalis was confirmed by observation under a confocal microscope (LSM510; Carl Zeiss, Germany).
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7

SHED Cells Tracking in Liver Transplant

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SHED was labeled with 5-(and-6)-carboxy fluorescein diacetate succinimidyl ester (CFSE; Molecular Probes Biotec Co., Eugene, OR, USA) and diluted to 1 × 107/ml for transplantation. The livers were flash-frozen at an optimum cutting temperature at 1 and 3 days post-injection. Nuclear staining was performed with diamidine phenyl indoles (DAPI) mounting medium (Vector Lab, Burlingame, CA, USA). The positions of CFSE-labeled SHED cells could be traced using a confocal laser scanning microscope (Zeiss, Thornwood, NY, USA).
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8

Intravascular Trafficking of Labeled Macrophages

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Total bone marrow cells from naïve C57BL/6 mice were enriched and CD11b+, CD68+, F4/80+ macrophages were consecutively sorted three times by magnetic bead isolation (Miltenyi Biotech) to achieve >95% purity. Purified macrophages were labeled with CFSE (Molecular Probes, Eugene, OR), a green fluorescent cell staining dye, as described previously (Sharma et al., 2010 (link)). A total of 6×105 cells/mouse were injected via the tail vein immediately after sham/TBI injury. To provide spatial analysis of macrophage trafficking into the brain, deeply anesthetized mice were perfused with PBS, followed by fixation with 4% paraformaldehyde in 0.1 M PBS (pH 7.4). Brains were post-fixed overnight in paraformaldehyde followed by cryoprotection with 30% sucrose (pH 7.4) until brains permeated. Serial coronal sections (12 µM) were prepared using a cryostat microtome and directly mounted onto glass slides. Anti-fade mounting media was added and glass cover slips were placed atop the slide. CFSE immunofluorescence was imaged using a LSM780 Meta confocal laser microscope and vendor supplied software (Carl Zeiss).
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9

Tracking SHED Cell Migration in Liver and Spleen

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SHED cells were labeled with 5-(and-6)-carboxy fluorescein diacetate succinimidyl ester (CFSE, Molecular Probes Biotec. Co) and diluted to 1 × 106/mL for transplantation. The liver and spleen were flash-frozen at optimum cutting temperature at 1 d, 3 d, and 7 d post-injection. Nuclear staining was performed with diamidine phenyl indoles (DAPI) mounting medium (Vector Lab, Burlingame, CA, United States). The positions of CFSE-labeled SHED cells could be traced using a confocal laser scanning microscope (Zeiss, Thornwood, NY, United States).
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