The largest database of trusted experimental protocols

Nucleofector machine

Manufactured by Lonza
Sourced in Switzerland, United States

The Nucleofector machine is a laboratory instrument designed for the transfection of cells, a process that introduces foreign genetic material into cells. The device utilizes an electrical pulse-based technology to facilitate the uptake of DNA, RNA, or other macromolecules into a variety of cell types, including difficult-to-transfect cells. The Nucleofector machine is a versatile tool used in various research and application areas that require the efficient delivery of genetic material into cells.

Automatically generated - may contain errors

10 protocols using nucleofector machine

1

Transduction of HSCs with Anti-miRNA Vectors

Check if the same lab product or an alternative is used in the 5 most similar protocols
Lenti-miR-Off-GFP-hsa-miR-15b vector (anti-miR-15b), Lenti-miR-Off-GFP-hsa-miR-219-5p vector (anti-miR-219-5p) and pLenti-III-GFP-mir-Off control vector (ABM Inc., Canada) were purchased from ABM Incorporation. Bacterial colonies were grown in LB-ampicillin broth by incubation with shaking at 37 °C overnight. Then plasmids were extracted using the DNA purification kit (DNA-spin, iNtRON Biotechnology, Seoul, Korea).
Nucleofection of CD34+ HSCs was performed according to the manufacturer's instructions with the nucleofector machine (Lonza). Cells (8×105) were resuspended in 100 μL of HSCs nucleofection solution (Lonza), and 5 μg of anti hsa-miR-15b, 5 μg of anti miR-219-5b, and 5 μg of control scramble vector (abm Inc., Canada) was added. Samples were transferred into certified cuvettes (Lonza) and transfected by nucleofection with program U-008. Fresh medium (500 μL) was added immediately after transfection to each cuvette, and the cells were plated and incubated at 37 °C for 10 days. After nucleofection, HSCs were stained with 0.4 % Trypan Blue (vital dye) (Sigma-Aldrich) for 1 min at room temperature and the number of live HSCs (unstained) were counted every 48 hours using a hemocytometer.
+ Open protocol
+ Expand
2

Fluorescent Labeling of Astrocytic IF Network

Check if the same lab product or an alternative is used in the 5 most similar protocols
Starting from a 10 cm diameter petri dish, primary astrocytes grown to confluence were trypsinized and electroporated with a Nucleofector machine (Lonza) using 5 μg of vimentin-EGFP DNA. We have previously shown that EGFP-tagged vimentin co-polymerizes with the endogenous IF proteins and fluorescently labels the whole astrocytic IF network. Therefore labeling vimentin fluorescently is enough to follow the dynamics of the complete/whole IF network [12 (link)]. Medium was changed the day after transfection.
+ Open protocol
+ Expand
3

Nucleofection of HUVECs with miR-216a

Check if the same lab product or an alternative is used in the 5 most similar protocols
Nucleofection of HUVECs was performed according to the manufacturer's instructions with the Nucleofector machine (Amaxa/Lonza, Basel, Switzerland). Cells (1 × 106) were resuspended in 100 μl of HUVEC nucleofection solution (Amaxa/Lonza), and 20 nmol/l of miRIDIAN miR-216a mimic (miR216a), 20 nmol/l of miRIDIAN mir-216a inhibitor (A216a), or 20 nmol/l of control scramble sequences specific for mimic (scramble M) or inhibitor (scramble A) experiments (Dharmacon, Lafayette, CO, USA) was added. Samples were transferred into certified cuvettes (Amaxa/Lonza) and transfected with program A-034. Fresh medium (500 μl) was added immediately after transfection to each cuvette, and the cells were plated and incubated at 37 °C for 3 days.
+ Open protocol
+ Expand
4

Plasmid Co-Electroporation in Mammalian Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The pcDNA3-eGFP plasmid was digested with BamHI, which cleaved between promoter and open reading frame. The pCMV-tdtomato plasmid was linearized with NotI as an efficiency control. Two million freshly prepared MECs or tumor cells were co-electroporated with 5 μg of both linear plasmids using Nucleofector machine and Human Mammary Epithelial Cell Nucleofector Kit (Lonza). The cells were then cultured in PMEC medium (DMEM/F12 containing 5% FBS, 5 μg/ml insulin, and 10 ng/ml EGF) in suspension for 18–24 hr, followed by surface marker staining and flow cytometry analysis.
+ Open protocol
+ Expand
5

Astrocyte and Astrocytoma Transfection

Check if the same lab product or an alternative is used in the 5 most similar protocols
Starting from a 10-cm Petri dish, cells grown to confluence were trypsinized and electroporated with a nucleofector machine (Lonza). We used 5 µg of DNA or 1 nmol of siRNA for astrocytes and 2.5 µg of DNA for U373 astrocytoma cells. Medium was changed 1 d after transfection and 1 d before the experiments. Optimal protein depletion was observed 4 d after nucleofection.
+ Open protocol
+ Expand
6

CRISPR-Engineered Cell Lines for Vimentin Knockout and Nuclear Pore Labeling

Check if the same lab product or an alternative is used in the 5 most similar protocols
MEF vimentin KO cells described in (30 (link)) (a gift from H. Herrmann, Deutsches Krebsforschungszentrum, Germany) and the CRISPR cell line U2OS Nup96-SNAP (a gift from J. Ries, European Molecular Biology Laboratory, Heidelberg, Germany) were grown in Dulbecco’s modified Eagle’s medium (DMEM) with glucose (4.5 g/liter) and supplemented with 10% fetal bovine serum (FBS), 1% penicillin-streptomycin (pen-strep), and 1% nonessential amino acid (NEAA) at 37°C in 5% CO2. For MEF vimentin KO cells, starting from a 10-cm-diameter petri dish, cells grown to confluence were trypsinized and electroporated with a Nucleofector machine (Lonza). We used 2 μg of DNA, mixed with 97 μl of solution for electroporation (Mirus MIR 50111). After electroporation, cells were resuspended in preheated medium and plated on clean 18-mm #1.5H glass coverslips (Marienfeld) in a 12-well plate with ~3000 cells per well. U373 cells, which are astrocytoma cells, were grown in minimum essential medium (MEM) supplemented with 10% FBS, 1% pen-strep, and 1% NEAAs. DMEM, MEM, pen-strep, NEAA, and FBS were purchased from Gibco.
+ Open protocol
+ Expand
7

TERT Transcriptional Activity in 293T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
In order to measure the transcriptional activity of TERT in 293T cells (1 × 105 cells per transfection, three replicates per condition), 293T cells were transiently transfected with a TERT luciferase promoter reporter plasmid (1 μg; Switchgear genomics) and co-transfected with or without a ZEB1 expression construct (1 or 3 μg; Origene) using a Lonza Nucleofector machine. The cells were cultured for 48 h, harvested and assayed for luciferase activity with the use of a GloMax 20/20 luminometer (Promega) in accordance with the manufacturer's instructions. Luciferase activity was expressed relative to that of cells transfected with a control plasmid containing a minimal luciferase promoter.
+ Open protocol
+ Expand
8

Transfection of HepG2 Cells with Itch siRNA

Check if the same lab product or an alternative is used in the 5 most similar protocols
HepG2, human hepatoma cells (ATCC, Rockville, MD), were maintained in RPMI containing 10% fetal bovine serum (FBS), 100 U/ml penicillin, and 100 mg/ml streptomycin (Invitrogen, Life Technologies). Cells were transfected with Itch siRNA using the Nucleofecteor AMAXA transfection kit according to the manufacturer's instructions with the use of a Nucleofector machine (Amaxa/Lonza). In short, cells 1 × 106 were resuspended in 100 μL of KIT V nucleofection solution (Amaxa/Lonza) with stated concentrations of Itch siRNA or control scramble sequences (Ambion, Texas), permeabilized and then plated and incubated at 37°C for 2 days before harvesting for Protein and RNA studies.
+ Open protocol
+ Expand
9

CRISPR-Mediated Cell Line Engineering

Check if the same lab product or an alternative is used in the 5 most similar protocols
MEF cells vimentin KO described in (30) (kind gift from Harald Herrmann, DKFZ, Germany) and the CRISPR cell line U2OS Nup96 -SNAP (kind gift from Jonas Ries, EMBL Heidelberg, Germany) were grown in Dulbecco's modified Eagle's medium (DMEM) with 4.5 g/L glucose and supplemented with 10% FBS, 1% penicillin-streptomycin (pen-strep) and 1% non-essential amino acid (NEAA) at 37 o C in 5% CO2. For MEF vimentin KO cells, starting from a 10 cm diameter petri dish, cells grown to confluence were trypsinized and electroporated with a Nucleofector machine (Lonza). We used 2 µg of DNA, mixed with 97 µL of solution for electroporation (Mirus (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.
The copyright holder for this preprint this version posted December 27, 2021. ; https://doi.org/10.1101/2021.09.07.459174 doi: bioRxiv preprint MIR 50111). After electroporation, cells were resuspended in pre-heated medium and plated on clean 18-mm nº1.5H glass coverslips (Marienfeld) in 12 wells plate with ~3000 cells per well. U373 cells, which are astrocytoma cells, were grown Minimum Essential Medium (MEM) supplemented with 10% FBS, 1% penicillin-streptomycin and 1% non-essential amino acids. DMEM, MEM, pen-strep, NEAA and FBS were purchased from Gibco.
+ Open protocol
+ Expand
10

Cloning and Transfection of VEAL2

Check if the same lab product or an alternative is used in the 5 most similar protocols
The plasmid pcDNA 3.1+ was used to clone full‐length VEAL2 or veal2 using EcoRI and NotI restriction sites. The EcoRI and NotI restriction enzyme sites were introduced at the ends of full‐length VEAL2 or veal2 in vitro using specific primers (primer details given in Appendix Table S3). Then, this fragment was cloned into a linearized pcDNA 3.1+ vector. Finally, the sequence of the identified recombinant plasmid was confirmed by Sanger sequencing. The transfection was performed using HUVEC nucleofector kit (vpb‐1002) (Lonza, USA) according to the manufacturer's protocol as follows: (i) HUVECs were cultured in EGM2 media (Lonza, USA) (P2‐P5) in T‐75 flasks at 37°C and with 5% CO2. (ii) 1 M cells were pelleted down and dissolved in 100 μl electrolyte in a cuvette and nucleofected using A‐034 program in nucleofector machine from Lonza, USA. (iii) After nucleofection, cells were dissolved in additional 900 μl HUVEC EGM‐2 media and aspirated to a fresh tube. These transfected cells were further used for various assays.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!