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Op50 e coli

Manufactured by Merck Group

OP50 E. coli is a laboratory strain of the bacterium Escherichia coli. It is commonly used as a food source for the nematode worm Caenorhabditis elegans, which is a model organism in biological research.

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2 protocols using op50 e coli

1

Optogenetic Activation of C. elegans Neurons

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Worms of an integrated strain expressing channelrhodopsin-2 in command interneurons under the control of Pglr-1 (ref. 16 (link)) were grown to L1-L2 stage on standard worm culture plates, and then transferred to new plates either with or without (for negative control) all-trans retinal two days before the experiment. The retinal plates were prepared by spotting each plate (60-mm diameter with 10 ml agar) with 200 μl OP50 E. coli containing 2 mM retinal (R2500, Sigma-Aldrich). Photostimulation was applied through a 40X water immersion objective in 2-s pulses at 30-s intervals using a light source (Lambda XL with SmartShutter, Sutter Instrument) and a 470±20 nm excitation filter (59222, Chroma Technology Corp.). The measured light intensity at the specimen position was 6.7 mW mm−2, which was sufficient to cause maximal evoked peak responses16 (link).
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2

High-Pressure Freezing and Freeze Substitution

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HPF and FS were optimized based on previous work in both C. elegans and Drosophila (Rostaing et al., 2004 (link); Fouquet et al., 2009 (link); Gracheva et al., 2010 (link); Stigloher et al., 2011 (link); McDonald et al., 2012 (link)). Late second-instar larvae were placed in the 200-µm cavity of aluminum specimen carriers (Type A, with the flat side of Type B carriers used as a lid; Technotrade International) filled with a mixture of 10% BSA (Sigma-Aldrich) and OP50 E. coli in PBS. Specimen carriers were pretreated with 1-Hexadecene (Sigma-Aldrich) to adequately seal the freezing chamber. HPF was performed with a Bal-Tec HPM-010 apparatus at a freezing speed >20,000 K/s and pressure >2,000 bar. FS was performed in a Leica EM AFS1, where samples were incubated in 0.5% glutaraldehyde, 0.1% tannic acid, and 1% H2O in anhydrous acetone for 98 h at −90°C, rinsed with 1% H2O in acetone for 2 h at −90°C followed by incubation in 1% OsO4 and 1% H2O in acetone for 7 h at −90°C. Samples were warmed to −20°C over 14 h (5°C/h), then incubated at −20°C for 16 h. Temperature was increased to 4°C over 2.4 h (10°/h). Finally, samples were rinsed with 1% H2O in acetone for 2 h, transferred to RT, and embedded in epon using standard procedures.
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