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P70at rotor

Manufactured by Hitachi
Sourced in Japan

The P70AT rotor is a centrifuge rotor designed for use with Hitachi's high-speed refrigerated centrifuges. It is capable of reaching a maximum speed of 70,000 revolutions per minute and can generate a maximum relative centrifugal force of 500,000 g. The rotor is suitable for a wide range of applications, including the separation and purification of biological samples, such as proteins, cells, and subcellular organelles.

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6 protocols using p70at rotor

1

Isolation and Characterization of R. equi-Derived Extracellular Vesicles

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EVs produced by 103+ (103+-EVs) or 103 (103-EVs) were Isolation by ultracentrifugation. Briefly, sub-cultured R. equi were inoculated to BHI and grown at 37 °C with vigorous shaking to OD600 = 1.0. R. equi were pelleted at 12,000× g for 20 min, the supernatant was again at 16,000× g for 20 min to remove remaining cells. The supernatant was filtered through a 0.45 μm membrane (Millipore, Burlington, MA, USA), and concentrated 20-fold with 100-kDa cut-off centrifugal filter (Millipore, Burlington, MA, USA). The retentate was again filtered through a 0.22 μm membrane (Millipore, Burlington, MA, USA). The resulting filtrate was subjected to ultracentrifugation at 150,000× g for 3 h at 4 °C using a P70AT rotor (Hitachi, Tokyo, Japan). The pellet obtained was re-suspended in phosphate-buffered saline (PBS) and again subjected to ultracentrifugation at 150,000× g for 3 h at 4 °C. The precipitate was re-suspended in PBS. The protein concentrations of R. equi-EVs were quantified using the bicinchoninic acid (BCA) assay (Thermo Fisher Scientific Inc, Waltham, MA, USA). Finally, R. equi-EVs were stored at −80 °C until further characterization. Additionally, 10 μL of purified R. equi-EVs was grown in BHI agar plates to confirm that all R. equi cells were eliminated.
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2

Isolation and Characterization of H. pylori OMVs

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H. pylori OMVs were isolated from bacterial culture supernatants using a method described by Horstman et al. with some modifications [62 (link)]. H. pylori 26,695 and clinical strains were inoculated with an OD600 of 0.05 and grown in 25 mL Brucella Broth media (BD Biosciences). Various H. pylori strains were harvested after 60 h of bacterial growth. After the removal of bacterial cells by centrifugation (4000× g, 10 min, 4 °C) in a centrifuge 5810R (Eppendorf, Hamburg, Germany) with an A-4–62 rotor, supernatants were filtered through a 0.45 μm filter and then centrifuged at 200,000× g (2 h, 4 °C) in an ultracentrifuge CP80WX with a P70AT rotor (Hitachi) to collect OMVs. Pellets were suspended in 100 μL of 20 mM Tris-HCl buffer (pH 8.1–8.2) and used as the OMV preparation (stored at −20 °C). A bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific, Waltham, MA, USA) with bovine serum albumin (BSA) as a standard was used to measure the protein concentration.
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3

Purification and Dispersion of Nanomaterials

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To remove the SiO2 support, the synthesized products were subjected to immersion in 6.0 M solution of NaOH and heated to 50°C using a water bath. After the process, the purified products were rinsed with deionized water until reaching a pH of 7, followed by drying in a convection oven. The resulting powders were then sonicated and dispersed in 2 wt % aqueous solution of DOC (Macklin, 98%) for a duration of 2.5 hours using an ultrasonic cell pulverizer (150 W). The formed aggregates were subsequently eliminated through centrifugation at 100,000g for 40 min using an ultracentrifuge (Hitachi, CP70ME, P70AT rotor). The upper supernatant containing the dispersed samples was collected for further optical characterizations.
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4

Isolation and Characterization of Small Extracellular Vesicles

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The cells were cultured with DMEM supplemented with 10% (v/v) sEV-depleted FBS and 1% (v/v) penicillin and 1% (v/v) streptomycin (all from Life Technologies, Carlsbad, CA, USA). Cells were cultured to 80% confluence, and the supernatants were collected after 72 h post-treatment. For the dissection of conditioned medium (CM), whole CM (10 mL/10 cm dish) was collected and centrifuged at 2000× g for 10 min to eliminate cell debris. One half (5 mL) was used as whole CM, concentrated, and used to treat cells, and the other half (5 mL) was further processed.
The CM was further processed using a sterile 0.22-µm filter (GE Healthcare Life Sciences, Little Chalfont, UK) and they were transferred into new ultracentrifugation tubes (Hitachi, Chiyoda, Tokyo, Japan) and centrifuged at 100,000× g for 2 h at 4 °C in a Hitachi CP100NX (Hitachi, Chiyoda, Tokyo, Japan) ultracentrifuge with a P70AT rotor (Hitachi, Chiyoda, Tokyo, Japan).
The last supernatants containing sEV-depleted FBS were collected as denominated supernatant fraction (SN), and the pellets (sEV fraction) were resuspended at 200 µL PBS (MP Biomedicals, Illkrich-Graffenstaden, France) or medium depending on if they were used for characterization or functional assays.
All relevant data of our experiments were submitted to the EV-TRACK knowledgebase (EV-TRACK ID: EV220413) [13 (link)].
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5

Exosome Isolation from Plasma Samples

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The exosomes were isolated from the plasma samples by ultracentrifugation. Briefly, approximate 4 ml plasma was thawed on ice and centrifuged at 3000 × g for 10 min to remove possible cell residues. After being filtered with 0.22 μm filter membranes, blood samples were balanced by adding phosphate buffer saline (PBS). Cleared blood samples were centrifuged at 120,000 × g for 10 h using P70AT rotor (Hitachi, Japan). All centrifugal steps were kept at 4 °C. Exosome fractions were resuspended in 250 μL PBS for the following RNA extraction.
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6

Isolation of Extracellular Vesicles from Serum

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EV was isolated from serum samples using ultracentrifugation (UC). Briefly, 500 μL of serum was centrifuged at 2500 × g for 10 min (4°C) followed by another centrifugation at 10000 × g for 30 min to pellet cell debris. The supernatant was then filtered through a 0.22-μm cellulose acetate centrifuge filter (Costar, USA), and the filtrate was diluted with PBS into a final volume of 5 mL. Crude EVs were pelleted by ultracentrifugation at 110,000 × g (P70AT rotor, Hitachi, Japan) for 5 h. Afterwards, the pellets were resuspended with PBS and ultracentrifuge at 110,000 × g for 70 min. The final EV pellets were resuspended with 50 μL of PBS and stored at -80°C for further analysis.
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