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2 protocols using rhodamine red x anti mouse igg

1

Stress Granule Formation in U2OS Cells

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After specified durations of treatment with 0.5 mM sodium arsenite (Sigma-Aldrich) to induce stress granule formation5 (link), wild-type U2OS cells were fixed with 4% formaldehyde for 15 min, permeabilized with 0.1% Triton X-100 in phosphate-buffered saline (PBS) and blocked with 5 mg ml–1 bovine serum albumin (Sigma-Aldrich), in some cases also containing 0.25% Triton X-100. Fixed cells were incubated overnight at 4 °C with primary antibodies (mouse anti-G3BP (1:500, abcam ab56574) and rabbit anti-β-tubulin (1:200, abcam ab6046)) to stain the stress granules and microtubules. Note that G3BP does not co-precipitate in β-tubulin immunoprecipitation and is commonly used as a stress granule marker26 (link),65 (link). Secondary antibodies consisted of rhodamine Red-X anti-mouse IgG (1:500, Jackson ImmunoResearch) and Alexa Fluor 647 anti-rabbit IgG (1:500, Jackson ImmunoResearch). DNA was stained by incubating in 4′,6-diamidino-2-phenylindole (DAPI) (1:500, Sigma) for 15 min at room temperature. Coverslips were mounted in ProLong Gold (ThermoFisher).
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2

Spinal Cord Immunohistochemistry in Mice

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Mice were transcardially perfused with 4% paraformaldehyde in phosphate-buffered saline (PBS). The brains were dissected, postfixed overnight at 4 °C in the same fixatives, and immersed overnight at 4 °C in PBS containing 30% sucrose. The brain specimens were then embedded in Tissue-Tek OCT compound (Sakura Finetek) and kept frozen at -80 °C until use. Transverse 20-µm sections of cervical spinal cord were prepared using a cryostat (CM1510S, Leica Biosystems). For immunohistochemical analysis, the sections were rinsed in PBS, blocked with 5% bovine serum albumin and 0.3% Triton X-100 in PBS for 1 hour at room temperature, and then incubated with a primary antibody overnight at 4 °C. The primary antibody was rabbit anti-protein kinase Cγ (PKCγ; 1:500, sc-211, RRID: AB_632234, Santa Cruz Biotechnology), mouse anti-NeuN (1:2,000, MAB377, RRID: AB_2298772, Millipore), or rabbit anti-c-Fos (1:500, 2250S, RRID: AB_2247211, Cell Signaling Technology). The sections were washed in PBS and incubated with secondary antibodies for 1 hour at room temperature. Rhodamine Red-X anti-mouse IgG (1:1,000, 715-295-151, RRID: AB_2340832, Jackson ImmunoResearch Labs) or Alexa Fluor 488 anti-rabbit IgG (1:1,000, A-21206, RRID: AB_141708, Molecular Probes) was used as a secondary antibody. All images were acquired using fluorescent microscopes (BZ-X710, Keyence; ApoTome.2, Zeiss).
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