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213 protocols using stereotaxic apparatus

1

Intrahippocampal Lentiviral Injection

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Intrahippocampal injection of LV was performed using a stereotaxic apparatus (Stoelting Co., Ltd., St. Louis, MO, USA). Briefly, mice were anesthetized and placed on stereotaxic apparatus
(Stoelting, Wood Dale, IL, USA). The reference points were bregma for the anterior-posterior axis, midline for the medial-lateral axis and the dura mater for the dorsal-ventral axis with the
tooth bar positioned at −3.3 mm. Two microlitre of LV particles were injected bilaterally into the dorsal hippocampus (anterior/posterior: 2.0 mm, medial/lateral ± 1.5 mm, and
dorsal/ventral: 1.5 mm) through a glass pipette (0.2 µl/min) using a glass microsyringe [19 (link)]. Following injection, the pipette was
left in place for an additional 5 min in situ to prevent the backflow of viral particles through the injection probe. The mice were allowed to recover for 2 weeks after the vector
injections.
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2

Bilateral BNST Viral Infusion in Rats

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Brain surgery consisted of subsequent bilateral infusions of the viral vector solution into the BNST. Subject male rats were anesthetized with isoflurane and placed in a stereotaxic apparatus (Stoelting Europe, Ireland). A 10 uL Hamilton syringe with a 30G blunt needle was mounted in a Hamilton injector (Stoelting) on the stereotaxic apparatus and inserted into each brain hemisphere sequentially at AP -0.4 mm, ML ± 3.80 mm, and DV -6.60 mm in reference to bregma, at a 20° angle with respect to the DV-axis, inserting the needle tip in the coronal plane from the lateral aspect toward the medial aspect of each hemisphere. Per hemisphere, 250 nL of the viral construct solution was injected into the BNST at an infusion rate of 150 nL/min. Following infusion, the needle was left in place for 10 min before withdrawal and closing of the skin with a continuous intradermal suture (Vicryl Rapide 40, Ethicon, Cincinnati, USA). After surgery, rats were immediately pair housed. Analgesic treatment consisted of 0.05 mg/kg buprenorphine and 2 mg/kg meloxicam pre-operative and post-operative after 24 and 48 h.
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3

Ouabain Injection in Rat Striatum

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Rats were anesthetized with ketamine (90 mg/kg) and xylazine (10 mg/kg), given by i.p. injection, and immobilized in a stereotaxic apparatus (Stoelting). A small burr hole was drilled in the cranium over the right hemisphere. The needle (length 15 mm, gage 33), connected to a 10-μl syringe (Hamilton, Switzerland), was lowered into the right striatum (coordinates A 0.5, L 3.8, D 4.7 mm). To minimize brain shift, there was a delay of 5 min between the needle insertion and the injection of the active substance. Then, 1 μl of 5 nmol ouabain (Sigma, Poland) was injected into the brain at a rate of 0.5 μl/min using a microinfusion pump (Stoelting, USA) mounted on a stereotaxic apparatus (Stoelting), as previously described [6 (link)]. The needle was then withdrawn and the skin was closed with a suture.
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4

Stereotaxic 6-OHDA Lesioning Protocol

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For stereotaxic surgery, animals were anesthetized with a combination of ketamine and xylazine (80 and 5 mg/kg, ip; respectively) and placed in a stoelting stereotaxic apparatus (stoelting, USA) in the flat skull position. The small central incision was made to make the skull appear. A 23 gauge sterile cannula was inserted into the injection site as a guide cannula for subsequent insertion of the injection tube into the striatum. The coordinates for this position, with reference to the atlas of Paxinos &Watson,19 were: anteroposterior from bregma (AP)= 0.4 mm, mediolateral from the midline (ML)= 2.8 mm and dorsoventral from the skull (DV)= -5 mm. Subsequently, 6-OHDA (10 μg/ rat in 2 μl saline containing 0.2% ascorbic acid) was infused by an infusion pump at the flow rate of 0.2 μl/min into the right striatum. Lesioned rats were subjected to the designed protocols after a 3-week recovery period. All of these procedures were performed for sham-operated animals, but they only received intra-striatal of 2 μl vehicle of 6-OHDA (0.9% saline containing 0.2% (w/v) ascorbic acid).
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5

6-OHDA Rat Model for Parkinson's Disease

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Rats were deeply anesthetized with 4% chloral hydrate (400 mg/kg, i.p.) and placed in a Stoelting stereotaxic apparatus (Stoelting Co., Kiel, WI, USA). According to a rat brain atlas, 6-OHDA (Sigma, St. Louis, MO, USA), which was dissolved in saline (16 µg/8 µl two side) was injected into the bilateral SNpc at a rate of 0.5 µl/min using a 10 -µl Hamilton syringe. The coordinates for the bilateral SNpc were −5.3 mm anteroposterior, ±1.0 mm mediolateral, and −7.8 mm dorsoventral (from the dura) from the bregma.32 (link) The syringe was left in the SNpc for 4 min and then slowly retracted. Two weeks after surgery, the rotarod test was performed using the Rotarod system (ZH-300, Zhenghua, Anhui Province, China) to test motor function. Each rat was trained for three consecutive days (three times per day) with the speed of the rotor accelerated from 4 to 25 r/min at a rate of 0.5 r/min. After the last training session, rats were tested three times at a speed of 25 r/min, and the longest duration of running time was recorded.
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6

Stereotaxic Implantation of Optical Fiber

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The mice were anesthetized with pentobarbital sodium (80 mg/kg, Sigma-Aldrich) and fixed to a stereotaxic apparatus (Stoelting). The guide cannula (RWD Life Science) was unilaterally implanted into the right GP [(Anterior–Posterior (AP): −0.3 mm, Medial–Lateral (ML): +1.9 mm, Dorsal-Ventral (DV): 2.6 mm) (according to the mouse brain in Stereotaxic Coordinates; Paxinos and Franklin, 2001 )]. Four skull screw holes were drilled, and tightly fitting screws were driven through the skull until the surface of the dura was reached. Both the cannula and the stainless steel anchoring screws were fixed to the skull with dental cement. After the surgical procedures, the animals were allowed to recover in individual chambers for at least 7 days. During experimentation, each animal was transferred to a chamber and connected to an optical fiber.
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7

Blocking Anti-C1q Antibody Injection

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The blocking anti-C1q antibody was produced using the variable domain sequences of the previously described anti-C1q M1 antibody (Hong et al., 2016a) on a mouse IgG2a backbone with the effector-attenuating substitutions L234A, L235A, and P329G (Lo et al., 2017) . 9-months-old female mice were anesthetized with 3% isoflurane and placed on a stereotaxic apparatus (Stoelting) for surgery. All injections were performed with a 10 ml syringe (Hamilton Company) with a pulled glass pipette tip glued to the end of needle, and a syringe pump (Stoelting Quintessential stereotaxic injector). The injection coordinate was 1.25 mm anterior, À1.82 mm lateral, 1.75 mm ventral to bregma. 2 ml of anti-C1q or isotype control antibody (both 28 mg/ml) were injected at a rate of 0.5 ml/min. The needle was removed 2 minutes after completion of the injection and mice were put back in their cage for 5 days before analysis.
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8

EEG Monitoring for Post-ROSC Brain Recovery

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In Experiment 1, EEG after ROSC was monitored, as reported previously [19 ]. Briefly, before intubation and cannulation procedures, animals underwent implantation of EEG electrodes bilaterally under isoflurane, using a stereotaxic apparatus (Stoelting, Chicago, IL, USA). Each animal had five screw electrodes (Plastics One, Roanoke, VA, USA) cortically implanted 2 mm lateral and 2 mm anterior or posterior to the bregma. In addition, a ground electrode was placed at 3 mm lateral on the right and 9 mm anterior to the bregma in the midline. EEGs were recorded using an Intan RHS Stim/Recording 16 channel recording controller (Intan Technologies, Los Angeles, CA, USA) during the baseline, asphyxial CA, resuscitation, and after ROSC. Raw EEG signals were used to determine the electrical activity. In addition, the durations between ROSC and onset of both EEG amplitude activity (defined as >5% of the basal value with no EEG activity), as well as continuous background EEG as markers of brain’s electrical recovery after CA/CPR, were also recorded [20 (link)]. Continuous background EEG activity was defended as continuous EEG activity/burst without low amplitude activity (suppression, <10 µV). EEG analysis was performed offline using MATLAB 7.0 (MathWorks, Inc., Natick, MA, USA) after the experiment was completed.
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9

Rat Model of Parkinson's Disease

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Rats were anesthetized by injection of ketamine (100 mg/kg) and xylazine (5 mg/kg), intraperitoneally. Then, 4 μL of 6-OHDA dissolved in isotonic saline containing 0.2 mg/mL of ascorbic acid was administrated into 4 sites in the right striatum using stereotaxic apparatus (Stoelting, USA) by a 10-μL Hamilton syringe. Coordinates for 6-OHDA injections were AP: 1.5, L: −2.5, DV: −6, and AP: 0.8, L: −3, DV: −6, and AP: 0.1, L: −3.2, DV: −6, and AP: −0.5, L: −3.6, DV: −6. AP and L were evaluated from bregma and DV was assessed from the surface of skull according to the atlas of Paxinos and Watson (2007) . In the end of surgery, the needle of the Hamilton syringe was left in the brain for an additional 5 minutes and, then, withdrawn at a rate of 1 mm/min.
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10

Cryoanesthetized Rat Pups: AAV1-hSynap-eGFP Injection

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Cryoanesthetized P1–3 rat pups were injected with a total amount of 1 μl of AAV1-hSynap-eGFP-WPRE-bGH (titer 1011 copies/ml; Hutson et al., 2012 (link)) into four sites of right sensorimotor cortex (0.25 μl/site; coordinates from Bregma: 1.5 mm ML: 0.7 mm AP; 1 mm ML: 0.3 mm AP; 1 mm ML: 0.0 mm AP; 2 mm ML: 0.5 mm AP). Briefly, animals were fixed on a stereotaxic apparatus (Cunningham, Stoelting Co., Wood Dale, IL, USA) previously cooled with dry ice and viral injections were performed by using a pneumatic ejection pump (PDES-02TX, npi) attached with a pulled glass micropipette (30 μm tip). Pups were then placed under a heating lamp until they were fully awake and transferred to the home cage with their mothers.
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