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38 protocols using eclipse ts2 fl

1

Immunohistochemical Analysis of LPCAT1 in Paraffin-Embedded Tumor Tissue

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Paraffin-embedded tumor tissue was cut into 4 μm sections, dewaxed, and rehydrated. HE and immunohistochemical staining were performed according to standard protocols. HE staining: Sections were deparaffinized, stained with hematoxylin–eosin, dehydrated, transparent, and sealed, then photographed under microscopic (Nikon, ECLIPSE Ts2-FL) observation. Immunohistochemical staining: After slicing, dewaxing and antigen repair were performed, and the normal sheep serum working solution was sealed. Each tissue was dripped with LPCAT1 Polyclonal Antibody (protentech, 16112-1-AP) and incubated overnight at 4 ℃ in a refrigerator. Incubate the secondary antibody for 30 min after cleaning. Then, perform color rendering, re-staining, dehydration, and sealing. Finally, take photos using a microscope (Nikon, ECLIPSE Ts2-FL).
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2

Aggregation Analysis of K562 Cells and Nuclei

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K562 cells were collected by centrifugation (300 g, 5 min, room temperature). 5 × 105 cells were used for cell aggregation analysis, and 5 × 105 cells were used to extract nuclei for nucleus aggregation analysis. The labeling procedures for cells and nuclei were like before. For cells and nuclei, 5 and 2.5 µl assembled CASB complex was used, respectively. After labeling, DAPI was added to nuclei suspension according to manufacturer’s instruction. Afterward, cells and nuclei were imaged by fluorescence microscopy (Eclipse Ts2‐FL, Nikon) and analyzed by flow cytometry (B75442, Beckman Coulter).
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3

TUNEL Assay for Apoptosis Detection

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Sections were dried on a slide warmer, hydrated in PBS, and permeabilized for 2 min in ethanol:acetic acid (1:1 vol/vol) at 25 °C. A DeadEnd™ Fluorometric TUNEL System (Promega Corp., WI, USA) was used to visualize TUNEL-labeled nuclei, and sections were counterstained with 1 μg/mL PI to visualize all nuclei. The stained sections were observed under a fluorescence microscope (Eclipse Ts2-FL; Nikon, Tokyo, Japan).
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4

Comprehensive Characterization of HINS Composite

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A field emission-scanning electron microscope (FE-SEM, JSM-7500F JEOL), high-resolution transmission electron microscope (TEM, SU900; operating at a band gap of 0.8 eV and acceleration voltage of 300 kV), and optical microscope (Eclipse Ts2-FL, Nikon) were used to determine the surface morphology and characteristics of the HINS samples. The dynamic light scattering technique was used to measure the zeta potential of the material and its modified equivalent on the DynaPro NanoStar instrument (Wyatt). Light microscopy was performed by the Leica Microsystems (Ltd., Milton Keynes, UK; magnification, ×100 and ×200). Then, the basic characterization studies (UV-Visible, XRD, FTIR, and EDX) of HINS composite has been performed in the previous study.26 (link)
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5

Cell Invasion Assay with OTEO Treatment

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Cell invasion assays were performed using the QCM ECMatrix Cell Invasion Assay kit (ECM550) (EMD Millipore Corp., Billerica, MA, USA) according to the manufacturer’s instructions. Briefly, RPMI 1640 containing 20% FBS was added to the lower chamber of a 24-well plate. An invasion chamber containing an 8-µm polycarbonate membrane layered with ECMatrixTM was aseptically inserted into the 24-well plate. AGS cells were prepared in serum-free media containing OTEO (IC50), then 300 µL of the cell suspension (1 × 106 cells/mL) was subsequently added into the invasion chamber. Serum-free medium without OTEO was used as control. The 24-well plate was incubated at 37 °C for 24 h in a CO2 incubator, after which non-invading cells were removed from the invasion chamber and the invasive cells were stained with crystal violet for 20 min. Stained invasive cells at the lower surface of the invasion chamber were observed and counted under an inverted microscope (ECLIPSE Ts2-FL, Nikon, Tokyo, Japan).
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6

Intracellular Calcium Imaging in SH-SY5Y Cells

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Intracellular calcium was assessed with a Fluo-4 AM dye (Abcam; Cambridge, United Kingdom) and confocal microscopy, following the manufacturer’s instructions. Fluo-4 AM was diluted in DMSO containing 2 mM probenecid and 0.02% pluronic F-127. In brief, the SH-SY5Y cells (2.2 × 104 cells/mL) were cultured in black, 96-well plates for quantification and in 6-well plates for imaging in DMEM/F12 without phenol red. Then, 60–70% confluence cells were stimulated with H2O2 (200 µM) for 2 h 30 min in serum-free media. The cells were washed with PBS containing probenecid (2 mM) at room temperature. The cells were incubated with the Fluo-4 AM (2 µM) dye loading solution at 37 °C for 30 min and protected from light, then washed with PBS containing probenecid (2 mM) at room temperature for 30 min. For the 96-well plates, the fluorescence intensities (λex = 488/λem = 515 nm) were measured using a fluorescence microplate reader (Molecular Device; Sunnyvale, CA, USA), and confocal images were acquired with a Nikon Eclipse Ts2-FL diascopic and epi-fluorescence illumination microscope.
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7

Transwell Barrier Formation Assay

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All barrier formation experiments were performed using a liquid-liquid interface culture system (Figure 2) in a transwell chamber, partitioned into apical and basolateral compartments by an inserted basket (insert). In this experiment, 16HBE cells (1 × 105 cells/well) were seeded onto the upper surface of an insert-well membrane (diameter 6.5 mm, pore size 0.4 μm) in 24-well transwell plates. The cells were cultured at 37°C under 5% CO₂ for 7 days in the normal medium, which was added to both the apical and basolateral compartments. The medium was replaced every day. Cell morphology or confluency was observed daily using a stereomicroscope (ECLIPSE Ts2-FL; Nikon, Tokyo, Japan). TEER values and Na-F permeability were measured daily.
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8

Cell Migration Assay under Hyperglycemia

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The cell migration assay was performed using the CytoSelect™ Wound Healing Insert (Cell Biolabs, San Diego, CA, USA) according to the manufacturer’s instructions. Briefly, the plastic insert was added into a well of a 24-well plate, then the cells were seeded at a density of 1 × 106 cells/well. After incubating for 12 h, the insert was removed carefully to create a 500 μm-width cell gap for measuring migration rates of the cells. Serial dosages of IGF-1 ranging from 0.325 to 2.6 pmol in the hyperglycemic medium was tested to determine the optimal dosage of IGF-1 in vitro. The SF-films loaded with different amounts of IGF-1 were placed directly on top of the cell monolayer with a created gap in medium containing either 25 mM (regular medium) or 50 mM (hyperglycemic medium) of glucose. Wound closure was serially imaged at different times (0, 3, 6, 8, 10, and 13 days) post-scratching using an inverted light microscope (ECLIPSE Ts2-FL, Nikon, Tokyo, Japan). Autoclaved alamarBlue reagent-containing medium was used as a positive control according to the kit manufacturer’s instruction. The fluorescence of the culture supernatant, which reflected the cell metabolic activity, was determined with excitation and emission wavelengths of 570 and 600 nm, respectively. The cell proliferation rate was calculated according to the formula provided by the dye manufacturer.
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9

Intracellular ROS Measurement Using DCFH-DA

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In the process of binding with cells, nanoprobes may disrupt the
oxidative balance of the cells, leading to an abnormal increase in
intracellular ROS concentration and resulting in oxidative damage
to targeted cells. The cell samples were added into an appropriate
volume of DCFH-DA working solution (10 μM) and incubated at
37 °C for 1 h in the dark. DCFH-DA is a fluorescent probe that
can pass through the cell membrane freely without fluorescence. After
entering the cell, it can be hydrolyzed by intracellular esterase
to form DCFH, which continues to be oxidized by ROS to a strong green
fluorescence dye (DCF, maximum wavelengths of excitation/emission
of 470/515 nm) that cannot penetrate the cell membrane. After incubation,
DCFH-DA was removed. The cells were rinsed three times with PBS to
fully remove the free DCFH-DA. The fluorescence images of the samples
were captured with a fluorescence microscope (Eclipse Ts2 FL, Nikon,
Japan). The fluorescence intensity of DCF and the intracellular ROS
level were in a positive correlation manner.
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10

Viability Assay of Recultured Cells

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The cell viability
of nanoprobe-captured and recultured cells was
also assessed by double staining of living and dead cells. In this
experiment, the LiveDye (maximum wavelengths of excitation/emission
of 488/530 nm), a fluorescence dye for permeable cells, was used to
stain the living cells. Meanwhile, the NucleiDye (maximum wavelengths
of excitation/emission of 535/617 nm), a fluorescence dye for impermeable
cells, was used to stain the dead cells.
The detection procedures
were as follows: cell samples were added with an appropriate volume
of LIVE/DEAD-dye working solution and incubated at 37 °C for
30 min in the dark. The LIVE/DEAD-dye working solution was removed.
The cell surface was washed twice with PBS. The fluorescence image
of the sample was captured with a fluorescence microscope (Eclipse
Ts2 FL, Nikon, Japan).
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