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6 protocols using af1837

1

Immunofluorescence Staining for Protein Localization

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Immunofluorescence was performed as previously described [2 (link),3 (link),36 (link)] with antibodies recognizing the following antigens: Myosin Heavy Chain (DSHB; MF20), Sox9 (Novus; NBP1-85551), EGFP (Aves Lab; GFP-1020), and Islet 1 (R&D; AF1837). Secondary antibodies (Jackson Immunoresearch) included anti-chicken FITC (703-095-155), anti-mouse TRITC (715-025-150), anti-goat TRITC (705-025-147), and anti-rabbit Cy5 (711-605-152). Nuclei were visualized using DAPI (Invitrogen; Slowfade Gold Antifade Reagent with DAPI; catalogue#: S36938) and fluorescence visualized using a Zeiss AxioImager II microscope.
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2

Islet1 Antibody Characterization in Neuroscience

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This goat polyclonal antibody (R&D system, Cat# AF1837, RRID: AB_2126324) was raised against E. coli-derived recombinant human Islet1. It has been previously used to reveal a variety of neuronal populations in the mouse brain and in rat and mouse retina (Elshatory et al., 2007b (link)).
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3

Protein Extraction and Western Blot Analysis

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Briefly, total proteins were extracted in RIPA (radio immunoprecipitation assay) buffer (9806; Cell Signaling, Danvers, MA, USA) containing 1 mM phenylmethylsulfonyl fluoride (8553S; Cell Signaling, Danvers, MA, USA) according to the manufacturer’s protocol. The BCA Protein Assay Kit (HX18651; Hoaxing, China) was used to measure protein concentration. Electrophoresis was performed with 30 μg total proteins separated by 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to polyvinylidene difluoride membranes (IPVH00010, Millipore, USA). The membrane was blocked with 5% (w/v) nonfat dry milk in 0.05 M Tris-buffered saline and 0.1% Tween-20 (TBST, pH 7.4) for 1 h and incubated with anti-ISL1(1:300; AF1837; R&D, Minneapolis, MN, USA) antibody and internal control GAPDH antibody (1:10,000; Ambion, USA) overnight at 4 °C. The secondary antibody, horseradish peroxidase-conjugated donkey anti-goat IgG (1:10,000; ab205723; Abcam, Cambridge, MA, USA), was diluted 1:5000 in TBST. The membranes were visualized using the SuperSignal West Pico Kit (Thermo Scientific, Waltham, MA, USA) substrate at room temperature. We used the ImageJ Software to assay the relative intensity of each blot. The intensity values of each group were normalized to GAPDH (internal control) in the same group.
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4

Immunocytochemical Profiling of iPSC-derived Motor Neurons

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iPSC-MNs were fixed in 4% paraformaldehyde, rinsed with PBS, incubated in 0.5% Triton-X in PBS, rinsed with 0.2% Tween-20 in PBS, incubated in blocking solution (5% normal donkey serum and 0.2% Tween-20 in PBS). Primary antibody solution in blocking solution containing various combinations of goat polyclonal IgG anti-Human ISL1 (1:200) ( R&D Systems AF1837, RRID: AB_2126324), mouse monoclonal IgG1 anti-NF-H (SMI-32) (1:200) (BioLegend 801701, RRID: AB_2564642), goat polyclonal anti-ChAT (1:200) (Millipore AB144P, RRID: AB_2079751), rabbit polyclonal IgG anti-PHOX2B (1:200) (GeneTex GTX109677, RRID: AB_1951223), mouse monoclonal IgG2b, rabbit polyclonal IgG anti-CHX10 (VSX2) (1:200) (Novus NBP1-84476, RRID: AB_11022841), and rabbit polyclonal IgG anti-SOX1 [EPR4766] 1:200) (GeneTex GTX62974) were incubated, rinsed with 0.2% Tween-20 in PBS, and incubated in species-specific Alexa-fluor secondary antibodies (1:2,000), and rinsed with 0.2% Tween-20 in PBS with DAPI staining. Fluorescent images were acquired using ImageXpress Micro XLS system (Molecular Devices) at 10X magnification. For a complete analysis, total 9 sites per well were captured. The captured images were quantified for the cellular population using MetaXpress software (Molecular Devices).
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5

Immunofluorescence Staining of Pancreatic Tissue

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Pancreatic samples were first fixed in freshly prepared 4% paraformaldehyde and embedded in paraffin. Sections were dewaxed, rehydrated, and blocked in 10% normal donkey serum for 2 h. Sections were then incubated with an anti-Isl1 antibody diluted 1:150 (AF1837; R&D, USA) at 4 °C overnight before being rinsed three times and incubated with a donkey anti-goat antibody diluted 1:200 (DAR-488, Life Technologies, USA) for 3 hours at room temperature. After three rinses and overnight incubation with an anti-PIASy antibody diluted 1:200 (sc-166706, Santa Cruz Biotechnology, USA) at 4 °C, the sections were rinsed three times and incubated with a donkey anti-mouse antibody diluted 1:200 (DAM-555, Life Technologies, USA) for 3 hours at room temperature. After three final rinses, the sections were examined under a fluorescence microscope (Leica Microsystems, Cambridge, UK). The NIT cell immunofluorescence assay was performed as previously described7 (link).
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6

Histological Analysis of Cardiac and Embryonic Tissues

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For the histological analyses, hearts and embryos were collected, fixed in 4% paraformaldehyde for 1 hr at 4°C, and stored in phosphate-buffered saline or embedded in optimal cutting temperature compound (Sakura Finetek, Tokyo, Japan). Sixteen-μm-thick frozen sections were stained with hematoxylin (Merck) and eosin (Kanto Chemical, Tokyo, Japan). Immunostaining of 16-μm-thick frozen sections was performed using primary antibodies against CD31 (553370, BD Pharmingen, RRID: AB_394816, 1:100), Flk1 (555307, BD Pharmingen, RRID:AB_395720, 1:100), Isl1 (AF1837, R&D systems, RRID:AB_2126324, 1:250), Prox1 (11-002, AngioBio, RRID: AB_10013720, 1:200; AF2727, R&D Systems, RRID: AB_2170716, 1:200), LYVE1 (11-034, AngioBio, 1:200; AF2125, R&D Systems, RPID: AB_2297188, 1:150), VEGFR3 (AF743, R&D Systems, RRID: AB_355563, 1:150), and GFP (GFP-RB-AF2020, FRL, RRID:AB_2491093, 1:500). Alexa Fluor-conjugated secondary antibodies (Abcam, RRID:AB_2636877, RRID:AB_2636997, RRID:AB_2752244, 1:400) were subsequently applied. The same protocol was followed for whole-mounted hearts and embryos, with the primary and secondary antibody incubation periods extended to two nights. Immunofluorescence imaging was conducted using a Nikon C2 confocal microscope or Keyence BZ-700. All images were processed using the ImageJ and Nikon NIS Elements software.
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