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Superscript 3 one step quantitative rt pcr kit

Manufactured by Thermo Fisher Scientific
Sourced in United States

The Superscript III one step quantitative RT-PCR kit is a laboratory product used for the reverse transcription and real-time quantitative polymerase chain reaction (RT-qPCR) of RNA samples. The kit provides the necessary reagents and enzymes to perform both the reverse transcription and subsequent qPCR amplification in a single, streamlined reaction.

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2 protocols using superscript 3 one step quantitative rt pcr kit

1

Multiplex RT-PCR for Respiratory Viruses

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Ribonucleic acid (RNA) was extracted using MagMax-96 viral RNA isolation kit as per manufacturer’s instruction [18 (link)]. Real-time Reverse Transcription PCR (qRT-PCR) were performed for the following respiratory viruses: influenza A virus, influenza B virus, respiratory syncytial virus (RSV) A and B, human metapneumovirus (hMPV), Para-influenza virus (PIV) 1,2,3 and 4, rhinovirus, adeno virus and corona virus (HCoV – 229E, OC43, HKU1) using the Invitrogen Superscript III one step quantitative RT-PCR kit (Invitrogen, Thermo Fischer Scientific, USA) [19 (link)]. This RT-PCR assay was carried out on ABI 7500 machine (Applied BiosystemsInc, USA). PCR reaction mixture was prepared for 25 µl that comprise of 10 µmol of forward and reverse primers, 5 µmol of Taqman probe, 12.5 µl of 2 × buffer, 0.5 µl of superscriptTMIII enzyme and 5 µl of nucleic acid template. Thermal cycling conditions for these qRT-PCR tests consisted of 45 cycles reaction with initial denaturation at 940C for 5 min, denaturation at 940C for 15 s, annealing at 550C for 30 s [18 (link), 19 (link)].
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2

Quantifying Mosquito-Borne Viral Transmission

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Samples were homogenised at 25 Hz for 3 min (Tissue-Lyser; Qiagen, Inc., Valencia, CA) and centrifuged at 4 °C and 3148 g for 4 min. Nucleic acids were extracted using the MagNA Pure LC System and Total Nucleic Acid Isolation Kit (Roche, Mannheim, Germany). The amount of viral RNA [plaque-forming unit equivalents (PFUeq)] in each sample (i.e. blood meal, body, legs, saliva) was determined using the LightCycler® 480 system (Roche) and Superscript III One-Step Quantitative RT-PCR kit (Invitrogen, Carlsbad, CA) for quantitative realtime TaqMan RT-PCR (qRT-PCR). We used an established protocol relating a standard curve to plaque assay quantification of WNV (Richards et al. 2007 ).
The infection rate was the percentage of all mosquitoes tested having infected bodies. The dissemination rate was the percentage of mosquitoes with infected bodies that also had infected legs. The transmission rate was the percentage of mosquitoes with infected legs that also had infected saliva.
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