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3 protocols using tcrβ clone h57 597

1

Isolation and Characterization of Immune Cells from IKKβ Liver

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ELSs were dissected under binocular from IKKβ(EE)Hep livers and digested for 30 minutes in 500µl digestion buffer (HBSS with 0.2 mg/ml collagenase IV and 0.1 mg/ml DNase1) at 37°C with gentle agitation. The cells were strained through 40µm filter by washing with cold DMEM, centrifuged for 15 minutes, RBCs were lysed for 10 minutes at 25° with erythrocytes lysis buffer, washed again and resuspended in 0.5ml DMEM and kept on ice for a few hours until staining. Viability of isolated immune cells was around 85% as determined by Trypan blue. Cells were resuspended and stained in PBS supplemented with 1% fetal calf serum and 1mM EDTA. Samples were stained and then analyzed by flow cytometry using a Gallios and Kaluza software (Beckman Coulter), or by fluorescence-activated cell sorter (FACS). Antibodies used for flow cytometry and FACS analysis: CD4 (clone RM-4.5, catalog#: 100536, BioLegend), CD8 (clone 53–6.7, catalog#: 65–0081 and 75–008, Tonbo), F4/80 (clone BM8, catalog#: 123127, BioLegend), CD11b (clone M1/70, catalog#: 101224, BioLegend), MHCII (clone KH74, catalog#: 115303, BioLegend), CD45.2 (clone 104, catalog#: 109807, BioLegend), NK1.1 (clone PK136, catalog#: 12–5941-83, eBioscience), TCRβ (clone: H57–597, catalog#: 35–5961, Tonbo), CD44 (clone IM7, catalog#: 103127, BioLegend), CD62L (clone MEL-14, catalog#: 104417, BioLegend), B220 (Catalog#: 553090, BD Pharmingen).
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2

Isolation and Characterization of Immune Cells from IKKβ(EE)Hep Liver

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ELSs were dissected under binocular from IKKβ(EE)Hep livers and digested for 30 minutes in 500μl digestion buffer (HBSS with 0.2 mg/ml collagenase IV and 0.1 mg/ml DNase1) at 37°C with gentle agitation. The cells were strained through 40μm filter by washing with cold DMEM, centrifuged for 15 minutes, RBCs were lysed for 10 minutes at 25° with erythrocytes lysis buffer, washed again and resuspended in 0.5ml DMEM and kept on ice for a few hours until staining. Viability of isolated immune cells was around 85% as determined by Trypan blue. Cells were resuspended and stained in PBS supplemented with 1% fetal calf serum and 1mM EDTA. Samples were stained and then analyzed by flow cytometry using a Gallios and Kaluza software (Beckman Coulter), or by fluorescence-activated cell sorter (FACS). Antibodies used for flow cytometry and FACS analysis: CD4 (clone RM-4.5, catalog#: 100536, BioLegend), CD8 (clone 53-6.7, catalog#: 65-0081 and 75-008, Tonbo), F4/80 (clone BM8, catalog#: 123127, BioLegend), CD11b (clone M1/70, catalog#: 101224, BioLegend), MHCII (clone KH74, catalog#: 115303, BioLegend), CD45.2 (clone 104, catalog#: 109807, BioLegend), NK1.1 (clone PK136, catalog#: 12-5941-83, eBioscience), TCRβ (clone: H57-597, catalog#: 35-5961, Tonbo), CD44 (clone IM7, catalog#: 103127, BioLegend), CD62L (clone MEL-14, catalog#: 104417, BioLegend), B220 (Catalog#: 553090, BD Pharmingen).
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3

Quantification of Hematopoietic Stem Cells

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Single cell suspensions from bone marrow were prepared and erythrocytes were lysed in ACK lysis buffer. Live single cells were analyzed by flow cytometry to quantify the LinSca-1+c-Kit+ (LSK) population. Fixable viability dye was from Tonbo. The lineage cocktail was comprised of APC-conjugated antibodies against CD8α(clone 53-6.7, Tonbo), TCRβ (clone H57-597, Tonbo), TCRγδ (clone Gl3, Biolegend), CD3ε (clone 145-2C11, Tonbo), B220 (clone RA3-682, Tonbo), CD19 (clone 1D3, Tonbo), CD11c (clone N418, Tonbo), Gr-1 (clone RB6-8C5, Tonbo), NK1.1 (clone PK136, Tonbo) and Ter119 (clone Ter119, Tonbo). Sca-1 (clone D7) and c-Kit (clone 2B8) were purchased from Biolegend or eBioscience. Analysis was performed on an Attune NxT cytometer (Life Technologies) and was analyzed using FlowJo (TreeStar).
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