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5 protocols using kgp701

1

Co-Immunoprecipitation Protocol for Protein Interactions

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Co-immunoprecipitation was performed according to a previous report.16 Briefly, proteins were extracted with cell lysis buffer (KGP701~KGP701–100, KeyGEN BioTECH, China) with 1% PMSF (KGP610, KeyGEN BioTECH, China). A total of 500 μg of protein extract was then incubated with 2 μg of appropriate immunoprecipitation (IP) antibodies, i.e., rabbit anti-Thy-1 (ab225, Abcam, US) or mouse anti- integrin β3 (sc-46655, Santa Cruz, USA) at 4 °C overnight with shaking. Then, 20 μl of protein A/G plus agarose (Thermo) was added, followed by incubation at 4 °C for 3 h with shaking. The pellets were washed five times with cell lysis buffer for 2 min and resuspended in 40 μl of 2 × electrophoresis loading buffer. After boiling for 10 min, 20 μl samples were used for SDS-PAGE and assessed by Western blot as described above.
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2

Protein Extraction and Western Blot Analysis

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When the cell confluence was above 80%, the protein extracts were collected from ESCC cell lines using protein extraction kit (PROTTOT-1KT, Sigma-Aldrich, USA) and RIPA buffer (KGP701, KeyGEN BioTECH, Nanjing, China). After being separated through sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE; P0670-250ml, Beyotime Biotech, Shanghai, China), proteins were transferred to polyvinylidene fluoride (PVDF) membranes and cultured in 5% skim milk. The membranes were cultivated with primary antibodies over night at 4°C, followed by being cultivated with secondary antibody for 1 h. After washing in TBST, the secondary antibodies were added and finally assayed by ECL substrate.
The primary antibodies were obtained from Abcam (UK) and listed as follows: anti-E-cadherin (ab40772), anti-Vimentin (ab92547), anti-CD63 (ab1318), anti-CD81, anti-HSP70 and anti-FOXM1 (ab245309), anti-GM130, with anti-β-Actin (ab8227) as the internal control. Experiment was conducted three times.
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3

Western Blot Analysis of Cell Signaling

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Total protein was extracted from cells after transfection using lysis buffer for western and IP (KeyGen, KGP701, Nanjing, China), and protein concentration was measured using a BCA protein assay kit (Beyotime, P0010, Shanghai, China). Proteinsamples were electrophoresed using SDS-PAGE and then transferred for incubation at 4ºC overnight with the following specific primary antibodies: p53 (ImmunoWay, YT3528, TX, USA), Bax (ImmunoWay, YT0455, TX, USA), Bcl-2 (ImmunoWay, YM3041, TX, USA), active caspase-3 (Abcam, ab32042, Cambridge, UK), PTPN1 (Abcam, ab75856, Cambridge, UK), MAP3K11 (Abcam, ab51068, Cambridge, UK), JNK1/2/3 (Bimake, A5005, TX, USA), c-Jun (Bimake, A5730, TX, USA), and GAPDH (ImmunoWay, YM3445, TX, USA). The samples were then incubated with HRP-conjugated anti-rabbit IgG antibody (CST, #7074, MA, USA) at room temperature for 1 h. Finally, proteins were detected using ECL (KeyGEN, KGP902, Nanjing, China). GAPDH was used as an internal reference. Image J was used for quantification of all Western blot bands.
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4

Photodynamic Therapy Using Ruthenium-Based Nanoparticles

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A total of 5 × 106 MDA-MB-231 cells were seeded into 6-well plates and incubated overnight. The cells were then treated for 12 h with RuDA-NPs (50 μM) or RuDA-NPs (50 μM) and irradiated with 808 nm laser (0.5 W, 10 min, 300 J cm−2) using PBS as the control group. After that, the cells were lysed in cell lysis buffer (KeyGEN BioTECH, KGP701), and the whole proteins were obtained after centrifugation at 8050 × g for 5 min at 4 °C. A pre-stained protein molecular weight Marker, 20–120 kD, KeyGEN BioTECH, KGM441) was used to determine the different blots. Equal amounts of proteins were then transferred to nitrocellulose filter membranes and blocked with nonfat milk (5%) in TBST buffer at room temperature for 2 h. Then, the membranes were incubated with primary antibodies (anti-β-actin 1:1000, anti-NRF2 1:500, anti-HO-1 1:10000, and anti-HSP70 1:1000), washed for three times with cold TBST buffer, and finally incubated with secondary antibodies (Goat Anti-rabbit IgG, IgG-HRP, KeyGEN BioTECH, KGAA35, 1:500). The blots were visualized via a chemiluminescence light-based detector (G:BOX chemiXR5, SYNGENE) and analyzed with Gel-Pro 32 software. Full image is provided in the Source Data file. Antibody information: Rabbit anti-β-actin (ABCAM ab68226), anti-NRF2 (ABCAM ab62352), anti-HO-1 (ABCAM ab68477), and anti-HSP70 (ABCAM ab181606).
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5

Erythroblast Protein Quantification Protocol

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The erythroblasts sorted from spleen were lysed with cell lysis buffer (KGP701, KeyGEN Biotech) containing freshly prepared protease inhibitor for 30 min on ice. The supernatant was collected after centrifugation for 15 min at 4 °C. The loading buffer was added to the supernatant and samples were denatured on a metal heater at 95 °C for 5 min. The protein was separated with 12% SDS-PAGE and transferred onto PVDF membrane (1620177, Bio-Rad, Hercules, CA, USA) with 100 V for 2 h. After blocking with 5% skim milk in Tris-buffered saline Tween (TBST) solution for 1.5 h at room temperature, the membrane was incubated with 14-3-3z (1:600, sc-1019, Santa Cruz Biotechnology, Santa Cruz, CA, USA) and GAPDH (1:5000, ab181602, Abcam, Cambridge, UK) antibodies overnight at 4 °C. The membrane was washed with TBST 3 times and incubated with a secondary antibody (1:5000, ab205718, Abcam) for 1 h at room temperature. ECL reagent (WBKlS0100, Millipore, Boston, MA, USA) was used to show protein bands and ImageJ software was used for quantitative analysis of the intensity.
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